FFCP PHASE1:Hg19::chr6:34497272..34497283,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:34497272..34497283,- | |||
|coexpression_cluster_id=C1913 | |coexpression_cluster_id=C1913 | ||
|description=CAGE_peak_at_chr6:34497272..34497283,- | |description=CAGE_peak_at_chr6:34497272..34497283,- | ||
|id=chr6:34497272..34497283,- | |id=chr6:34497272..34497283,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.02e-15;10!UBERON:0006601;4.33e-08;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.17e-65!69;UBERON:0006238!1.17e-65!69;UBERON:0001049!5.54e-65!57;UBERON:0005068!5.54e-65!57;UBERON:0006241!5.54e-65!57;UBERON:0007135!5.54e-65!57;UBERON:0002616!1.23e-62!59;UBERON:0005743!1.56e-55!86;UBERON:0001017!1.33e-54!82;UBERON:0001893!2.02e-54!34;UBERON:0002020!2.50e-54!34;UBERON:0003528!2.50e-54!34;UBERON:0002619!1.36e-52!22;UBERON:0001869!4.21e-52!32;UBERON:0002791!4.30e-50!33;UBERON:0000073!7.79e-50!94;UBERON:0001016!7.79e-50!94;UBERON:0002780!1.65e-49!41;UBERON:0001890!1.65e-49!41;UBERON:0006240!1.65e-49!41;UBERON:0003080!2.96e-48!42;UBERON:0000956!3.70e-46!25;UBERON:0000203!3.70e-46!25;UBERON:0003075!8.53e-45!86;UBERON:0007284!8.53e-45!86;UBERON:0001950!2.17e-43!20;UBERON:0002346!1.40e-42!90;UBERON:0007023!4.98e-41!115;UBERON:0000033!3.79e-40!123;UBERON:0000153!4.93e-38!129;UBERON:0007811!4.93e-38!129;UBERON:0003056!1.60e-35!61;UBERON:0000349!2.90e-28!5;UBERON:0004121!1.68e-25!169;UBERON:0001871!3.95e-25!7;UBERON:0000924!8.77e-25!173;UBERON:0006601!8.77e-25!173;UBERON:0000200!1.64e-23!6;UBERON:0004733!1.39e-21!12;UBERON:0002028!1.39e-21!12;UBERON:0007277!1.39e-21!12;UBERON:0004732!7.35e-20!13;UBERON:0001872!9.93e-19!5;UBERON:0000988!2.83e-17!3;UBERON:0002771!3.16e-17!3;UBERON:0003076!4.21e-17!15;UBERON:0003057!4.21e-17!15;UBERON:0002298!4.52e-17!8;UBERON:0000025!1.99e-15!194;UBERON:0002680!3.50e-15!9;UBERON:0001895!3.50e-15!9;UBERON:0010092!3.50e-15!9;UBERON:0001876!1.18e-12!2;UBERON:0001954!3.13e-12!2;UBERON:0003022!3.13e-12!2;UBERON:0002421!3.13e-12!2;UBERON:0002600!3.13e-12!2;UBERON:0002148!6.49e-12!2;UBERON:0009662!6.49e-12!2;UBERON:0000064!7.16e-12!219;UBERON:0004111!2.41e-11!241;UBERON:0000475!1.61e-10!365;UBERON:0002420!2.02e-10!9;UBERON:0007245!2.02e-10!9;UBERON:0010009!2.02e-10!9;UBERON:0010011!2.02e-10!9;UBERON:0000454!2.02e-10!9;UBERON:0002308!4.19e-10!9;UBERON:0000125!4.19e-10!9;UBERON:0000477!1.22e-09!286;UBERON:0000483!2.33e-09!309;UBERON:0000119!3.26e-09!312;UBERON:0006331!3.13e-08!3;UBERON:0001896!3.25e-08!3;UBERON:0005290!3.25e-08!3;UBERON:0010096!3.25e-08!3;UBERON:0002581!2.99e-07!1;UBERON:0007190!3.17e-07!1;UBERON:0001874!3.57e-07!1;UBERON:0002902!3.78e-07!1;UBERON:0009899!3.78e-07!1;UBERON:0003112!4.25e-07!1;UBERON:0000032!4.25e-07!1;UBERON:0005253!4.25e-07!1;UBERON:0003128!4.25e-07!1;UBERON:0002241!4.25e-07!1;UBERON:0001703!4.25e-07!1;UBERON:0004761!4.25e-07!1;UBERON:0009617!4.25e-07!1;UBERON:0002022!5.37e-07!1;UBERON:0000481!6.84e-07!347;UBERON:0001882!7.15e-07!1;UBERON:0005403!7.15e-07!1 | |ontology_enrichment_uberon=UBERON:0000955!1.17e-65!69;UBERON:0006238!1.17e-65!69;UBERON:0001049!5.54e-65!57;UBERON:0005068!5.54e-65!57;UBERON:0006241!5.54e-65!57;UBERON:0007135!5.54e-65!57;UBERON:0002616!1.23e-62!59;UBERON:0005743!1.56e-55!86;UBERON:0001017!1.33e-54!82;UBERON:0001893!2.02e-54!34;UBERON:0002020!2.50e-54!34;UBERON:0003528!2.50e-54!34;UBERON:0002619!1.36e-52!22;UBERON:0001869!4.21e-52!32;UBERON:0002791!4.30e-50!33;UBERON:0000073!7.79e-50!94;UBERON:0001016!7.79e-50!94;UBERON:0002780!1.65e-49!41;UBERON:0001890!1.65e-49!41;UBERON:0006240!1.65e-49!41;UBERON:0003080!2.96e-48!42;UBERON:0000956!3.70e-46!25;UBERON:0000203!3.70e-46!25;UBERON:0003075!8.53e-45!86;UBERON:0007284!8.53e-45!86;UBERON:0001950!2.17e-43!20;UBERON:0002346!1.40e-42!90;UBERON:0007023!4.98e-41!115;UBERON:0000033!3.79e-40!123;UBERON:0000153!4.93e-38!129;UBERON:0007811!4.93e-38!129;UBERON:0003056!1.60e-35!61;UBERON:0000349!2.90e-28!5;UBERON:0004121!1.68e-25!169;UBERON:0001871!3.95e-25!7;UBERON:0000924!8.77e-25!173;UBERON:0006601!8.77e-25!173;UBERON:0000200!1.64e-23!6;UBERON:0004733!1.39e-21!12;UBERON:0002028!1.39e-21!12;UBERON:0007277!1.39e-21!12;UBERON:0004732!7.35e-20!13;UBERON:0001872!9.93e-19!5;UBERON:0000988!2.83e-17!3;UBERON:0002771!3.16e-17!3;UBERON:0003076!4.21e-17!15;UBERON:0003057!4.21e-17!15;UBERON:0002298!4.52e-17!8;UBERON:0000025!1.99e-15!194;UBERON:0002680!3.50e-15!9;UBERON:0001895!3.50e-15!9;UBERON:0010092!3.50e-15!9;UBERON:0001876!1.18e-12!2;UBERON:0001954!3.13e-12!2;UBERON:0003022!3.13e-12!2;UBERON:0002421!3.13e-12!2;UBERON:0002600!3.13e-12!2;UBERON:0002148!6.49e-12!2;UBERON:0009662!6.49e-12!2;UBERON:0000064!7.16e-12!219;UBERON:0004111!2.41e-11!241;UBERON:0000475!1.61e-10!365;UBERON:0002420!2.02e-10!9;UBERON:0007245!2.02e-10!9;UBERON:0010009!2.02e-10!9;UBERON:0010011!2.02e-10!9;UBERON:0000454!2.02e-10!9;UBERON:0002308!4.19e-10!9;UBERON:0000125!4.19e-10!9;UBERON:0000477!1.22e-09!286;UBERON:0000483!2.33e-09!309;UBERON:0000119!3.26e-09!312;UBERON:0006331!3.13e-08!3;UBERON:0001896!3.25e-08!3;UBERON:0005290!3.25e-08!3;UBERON:0010096!3.25e-08!3;UBERON:0002581!2.99e-07!1;UBERON:0007190!3.17e-07!1;UBERON:0001874!3.57e-07!1;UBERON:0002902!3.78e-07!1;UBERON:0009899!3.78e-07!1;UBERON:0003112!4.25e-07!1;UBERON:0000032!4.25e-07!1;UBERON:0005253!4.25e-07!1;UBERON:0003128!4.25e-07!1;UBERON:0002241!4.25e-07!1;UBERON:0001703!4.25e-07!1;UBERON:0004761!4.25e-07!1;UBERON:0009617!4.25e-07!1;UBERON:0002022!5.37e-07!1;UBERON:0000481!6.84e-07!347;UBERON:0001882!7.15e-07!1;UBERON:0005403!7.15e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001871;1.44e-23;6!UBERON:0001876;4.66e-21;2!UBERON:0001950;9.30e-18;20!UBERON:0002619;2.71e-16;22!UBERON:0000956;1.62e-14;25!UBERON:0000203;1.62e-14;25!UBERON:0003528;4.69e-12;34!UBERON:0002020;4.69e-12;34!UBERON:0001893;4.69e-12;34!UBERON:0000955;1.46e-11;68!UBERON:0001869;2.05e-11;32!UBERON:0002791;3.94e-10;32!UBERON:0001872;2.97e-09;5!UBERON:0000349;2.97e-09;5!UBERON:0001017;3.07e-09;75!UBERON:0002780;8.52e-07;41!UBERON:0001890;8.52e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001871,1.61e-23,6;UBERON:0001876,3.81e-21,2;UBERON:0001950,1.04e-17,20;UBERON:0002619,3.01e-16,22;UBERON:0000955,9.02e-15,68;UBERON:0006238,9.02e-15,68;UBERON:0000956,1.78e-14,25;UBERON:0000203,1.78e-14,25;UBERON:0001017,1.45e-12,81;UBERON:0002791,1.38e-11,32;UBERON:0001869,1.38e-11,32;UBERON:0001016,2.13e-11,89;UBERON:0003528,5.68e-11,34;UBERON:0002020,5.68e-11,34;UBERON:0001893,5.68e-11,34;UBERON:0000349,2.74e-09,5;UBERON:0002780,2.82e-09,41;UBERON:0001890,2.82e-09,41;UBERON:0003080,2.82e-09,41;UBERON:0006240,2.82e-09,41;UBERON:0001872,3.22e-09,5;UBERON:0000073,2.22e-07,53;UBERON:0002616,2.22e-07,53;UBERON:0001049,4.98e-07,56;UBERON:0005068,4.98e-07,56;UBERON:0006241,4.98e-07,56;UBERON:0007135,4.98e-07,56 | |||
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|short_description=p@chr6:34497272..34497283,- | |short_description=p@chr6:34497272..34497283,- | ||
}} | }} |
Latest revision as of 00:54, 31 July 2015
Short description: | p@chr6:34497272..34497283, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:34497272..34497283, - |
Coexpression cluster: | C1913_brain_parietal_insula_temporal_frontal_postcentral_paracentral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
temporal lobe | 1.61e-23 | 6 |
amygdala | 3.81e-21 | 2 |
neocortex | 1.04e-17 | 20 |
regional part of cerebral cortex | 3.01e-16 | 22 |
brain | 9.02e-15 | 68 |
future brain | 9.02e-15 | 68 |
cerebral cortex | 1.78e-14 | 25 |
pallium | 1.78e-14 | 25 |
central nervous system | 1.45e-12 | 81 |
regional part of telencephalon | 1.38e-11 | 32 |
cerebral hemisphere | 1.38e-11 | 32 |
nervous system | 2.13e-11 | 89 |
brain grey matter | 5.68e-11 | 34 |
gray matter | 5.68e-11 | 34 |
telencephalon | 5.68e-11 | 34 |
limbic system | 2.74e-09 | 5 |
regional part of forebrain | 2.82e-09 | 41 |
forebrain | 2.82e-09 | 41 |
anterior neural tube | 2.82e-09 | 41 |
future forebrain | 2.82e-09 | 41 |
parietal lobe | 3.22e-09 | 5 |
regional part of nervous system | 2.22e-07 | 53 |
regional part of brain | 2.22e-07 | 53 |
neural tube | 4.98e-07 | 56 |
neural rod | 4.98e-07 | 56 |
future spinal cord | 4.98e-07 | 56 |
neural keel | 4.98e-07 | 56 |