FFCP PHASE1:Hg19::chr6:31797946..31797949,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:31797946..31797949,+ | |||
|coexpression_cluster_id=C4593 | |coexpression_cluster_id=C4593 | ||
|description=CAGE_peak_at_chr6:31797946..31797949,+ | |description=CAGE_peak_at_chr6:31797946..31797949,+ | ||
|id=chr6:31797946..31797949,+ | |id=chr6:31797946..31797949,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.95e-08;33!CL:0002057;8.95e-08;33 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.02e-07;29 | |||
|ontology_enrichment_disease=DOID:0050687!1.04e-17!143;DOID:305!1.12e-16!106;DOID:162!4.93e-14!235;DOID:14566!3.88e-13!239 | |ontology_enrichment_disease=DOID:0050687!1.04e-17!143;DOID:305!1.12e-16!106;DOID:162!4.93e-14!235;DOID:14566!3.88e-13!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.71e-17,143;DOID:305,1.47e-16,106;DOID:162,9.97e-14,235;DOID:14566,1.16e-12,239 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.59e-16!115;UBERON:0000062!1.51e-15!511;UBERON:0001049!1.09e-11!57;UBERON:0005068!1.09e-11!57;UBERON:0006241!1.09e-11!57;UBERON:0007135!1.09e-11!57;UBERON:0002346!1.79e-10!90;UBERON:0003075!1.12e-09!86;UBERON:0007284!1.12e-09!86;UBERON:0001017!3.60e-09!82;UBERON:0000073!3.99e-09!94;UBERON:0001016!3.99e-09!94;UBERON:0000955!5.19e-09!69;UBERON:0006238!5.19e-09!69;UBERON:0005743!7.88e-09!86;UBERON:0000468!3.33e-08!659;UBERON:0000064!4.02e-08!219;UBERON:0000922!4.21e-08!612;UBERON:0003080!4.28e-08!42;UBERON:0002616!5.09e-08!59;UBERON:0002050!7.42e-08!605;UBERON:0005423!7.42e-08!605;UBERON:0004921!1.20e-07!129;UBERON:0004185!1.20e-07!129;UBERON:0002780!1.32e-07!41;UBERON:0001890!1.32e-07!41;UBERON:0006240!1.32e-07!41;UBERON:0000923!1.37e-07!604;UBERON:0005291!1.37e-07!604;UBERON:0006598!1.37e-07!604;UBERON:0002532!1.37e-07!604;UBERON:0002020!5.15e-07!34;UBERON:0003528!5.15e-07!34 | |ontology_enrichment_uberon=UBERON:0007023!1.59e-16!115;UBERON:0000062!1.51e-15!511;UBERON:0001049!1.09e-11!57;UBERON:0005068!1.09e-11!57;UBERON:0006241!1.09e-11!57;UBERON:0007135!1.09e-11!57;UBERON:0002346!1.79e-10!90;UBERON:0003075!1.12e-09!86;UBERON:0007284!1.12e-09!86;UBERON:0001017!3.60e-09!82;UBERON:0000073!3.99e-09!94;UBERON:0001016!3.99e-09!94;UBERON:0000955!5.19e-09!69;UBERON:0006238!5.19e-09!69;UBERON:0005743!7.88e-09!86;UBERON:0000468!3.33e-08!659;UBERON:0000064!4.02e-08!219;UBERON:0000922!4.21e-08!612;UBERON:0003080!4.28e-08!42;UBERON:0002616!5.09e-08!59;UBERON:0002050!7.42e-08!605;UBERON:0005423!7.42e-08!605;UBERON:0004921!1.20e-07!129;UBERON:0004185!1.20e-07!129;UBERON:0002780!1.32e-07!41;UBERON:0001890!1.32e-07!41;UBERON:0006240!1.32e-07!41;UBERON:0000923!1.37e-07!604;UBERON:0005291!1.37e-07!604;UBERON:0006598!1.37e-07!604;UBERON:0002532!1.37e-07!604;UBERON:0002020!5.15e-07!34;UBERON:0003528!5.15e-07!34 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.12e-16,114;UBERON:0011216,8.03e-14,223;UBERON:0001049,2.19e-11,56;UBERON:0005068,2.19e-11,56;UBERON:0006241,2.19e-11,56;UBERON:0007135,2.19e-11,56;UBERON:0002346,2.07e-10,86;UBERON:0000073,3.14e-10,53;UBERON:0002616,3.14e-10,53;UBERON:0003075,1.35e-09,82;UBERON:0007284,1.35e-09,82;UBERON:0001016,8.05e-09,89;UBERON:0001017,1.23e-08,81;UBERON:0000955,1.53e-08,68;UBERON:0006238,1.53e-08,68;UBERON:0002780,9.63e-08,41;UBERON:0001890,9.63e-08,41;UBERON:0003080,9.63e-08,41;UBERON:0006240,9.63e-08,41;UBERON:0004921,1.93e-07,118;UBERON:0003528,3.87e-07,34;UBERON:0002020,3.87e-07,34 | |||
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| ||
|short_description=p@chr6:31797946..31797949,+ | |short_description=p@chr6:31797946..31797949,+ | ||
}} | }} |
Latest revision as of 00:11, 31 July 2015
Short description: | p@chr6:31797946..31797949, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:31797946..31797949, + |
Coexpression cluster: | C4593_Mast_heart_vagina_aorta_peripheral_substantia_breast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 8.12e-16 | 114 |
organ system subdivision | 8.03e-14 | 223 |
neural tube | 2.19e-11 | 56 |
neural rod | 2.19e-11 | 56 |
future spinal cord | 2.19e-11 | 56 |
neural keel | 2.19e-11 | 56 |
neurectoderm | 2.07e-10 | 86 |
regional part of nervous system | 3.14e-10 | 53 |
regional part of brain | 3.14e-10 | 53 |
neural plate | 1.35e-09 | 82 |
presumptive neural plate | 1.35e-09 | 82 |
nervous system | 8.05e-09 | 89 |
central nervous system | 1.23e-08 | 81 |
brain | 1.53e-08 | 68 |
future brain | 1.53e-08 | 68 |
regional part of forebrain | 9.63e-08 | 41 |
forebrain | 9.63e-08 | 41 |
anterior neural tube | 9.63e-08 | 41 |
future forebrain | 9.63e-08 | 41 |
subdivision of digestive tract | 1.93e-07 | 118 |
brain grey matter | 3.87e-07 | 34 |
gray matter | 3.87e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.71e-17 | 143 |
carcinoma | 1.47e-16 | 106 |
cancer | 9.97e-14 | 235 |
disease of cellular proliferation | 1.16e-12 | 239 |