Personal tools

FFCP PHASE1:Hg19::chr6:151054827..151054836,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=not supported
|DHSsupport=supported
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=57480
|EntrezGene=entrezgene:57480
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding
|HGNC=20884
|HGNC=HGNC:20884
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=Q5JYA6
|UniProt=uniprot:Q5JYA6
|association_with_transcript=58bp_to_BC140864,BC151134_5end
|association_with_transcript=58bp_to_BC140864,BC151134_5end
|cluster_id=chr6:151054827..151054836,+
|coexpression_cluster_id=C162
|coexpression_cluster_id=C162
|description=CAGE_peak_23_at_PLEKHG1_5end
|description=CAGE_peak_23_at_PLEKHG1_5end

Revision as of 20:55, 30 July 2015

Short description:p23@PLEKHG1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_23_at_PLEKHG1_5end
Coexpression cluster:C162_spinal_locus_medulla_substantia_thalamus_globus_diencephalon
Association with transcript: 58bp_to_BC140864, BC151134_5end
EntrezGene:57480
HGNC: 20884
UniProt: Q5JYA6
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0.0
0.5
1.0
1.5
2.0
2.5




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data