FFCP PHASE1:Hg19::chr6:145244699..145244732,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:145244699..145244732,+ | |||
|description=CAGE_peak_at_chr6:145244699..145244732,+ | |description=CAGE_peak_at_chr6:145244699..145244732,+ | ||
|id=chr6:145244699..145244732,+ | |id=chr6:145244699..145244732,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.27e-21!254;CL:0000039!2.05e-09!7;CL:0000586!2.05e-09!7;CL:0002076!2.04e-08!43;CL:0000223!2.11e-08!59;CL:0002149!2.33e-07!6;CL:0002255!2.33e-07!6;CL:0002251!6.80e-07!21 | |ontology_enrichment_celltype=CL:0000066!1.27e-21!254;CL:0000039!2.05e-09!7;CL:0000586!2.05e-09!7;CL:0002076!2.04e-08!43;CL:0000223!2.11e-08!59;CL:0002149!2.33e-07!6;CL:0002255!2.33e-07!6;CL:0002251!6.80e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:1001319;3.54e-13;1!CL:1000600;3.54e-13;1!CL:0000083;4.78e-13;4!CL:0002149;6.26e-09;6!CL:0002255;6.26e-09;6!CL:0002076;9.14e-07;42 | |ontology_enrichment_celltype_v019=CL:1001319;3.54e-13;1!CL:1000600;3.54e-13;1!CL:0000083;4.78e-13;4!CL:0002149;6.26e-09;6!CL:0002255;6.26e-09;6!CL:0002076;9.14e-07;42 | ||
|ontology_enrichment_celltype_v019_2=CL:1001319,3.33e-13,1;CL:1000600,3.33e-13,1;CL:0000083,4.78e-13,4;CL:0000223,3.74e-12,58;CL:0002076,1.09e-09,42;CL:0002149,6.26e-09,6;CL:0002255,6.26e-09,6;CL:0000066,1.80e-08,253 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!2.72e-57!106;DOID:0050687!3.25e-45!143;DOID:1749!6.51e-29!14;DOID:162!5.48e-24!235;DOID:14566!2.61e-23!239;DOID:4929!2.53e-10!2;DOID:299!3.01e-10!25;DOID:7!1.66e-07!39;DOID:3001!2.33e-07!6 | |ontology_enrichment_disease=DOID:305!2.72e-57!106;DOID:0050687!3.25e-45!143;DOID:1749!6.51e-29!14;DOID:162!5.48e-24!235;DOID:14566!2.61e-23!239;DOID:4929!2.53e-10!2;DOID:299!3.01e-10!25;DOID:7!1.66e-07!39;DOID:3001!2.33e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:4929;1.45e-24;2!DOID:299;1.51e-16;25!DOID:6193;3.54e-13;1!DOID:1793;4.78e-13;4!DOID:3111;7.68e-13;1!DOID:3603;7.68e-13;1!DOID:170;5.35e-09;6!DOID:3001;6.26e-09;6!DOID:1749;5.18e-08;14!DOID:3910;2.15e-07;2!DOID:4074;2.28e-07;2!DOID:4905;2.28e-07;2!DOID:3498;2.28e-07;2!DOID:3350;3.18e-07;2!DOID:3493;5.28e-07;2 | |ontology_enrichment_disease_v019=DOID:4929;1.45e-24;2!DOID:299;1.51e-16;25!DOID:6193;3.54e-13;1!DOID:1793;4.78e-13;4!DOID:3111;7.68e-13;1!DOID:3603;7.68e-13;1!DOID:170;5.35e-09;6!DOID:3001;6.26e-09;6!DOID:1749;5.18e-08;14!DOID:3910;2.15e-07;2!DOID:4074;2.28e-07;2!DOID:4905;2.28e-07;2!DOID:3498;2.28e-07;2!DOID:3350;3.18e-07;2!DOID:3493;5.28e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4929,1.45e-24,2;DOID:305,5.93e-23,106;DOID:0050687,4.84e-19,143;DOID:299,1.46e-16,25;DOID:6193,2.95e-13,1;DOID:1793,4.78e-13,4;DOID:3111,7.68e-13,1;DOID:3603,7.68e-13,1;DOID:162,9.56e-11,235;DOID:14566,1.77e-10,239;DOID:170,5.35e-09,6;DOID:3001,6.26e-09,6;DOID:1749,5.44e-08,14;DOID:3910,2.15e-07,2;DOID:4074,2.28e-07,2;DOID:4905,2.28e-07,2;DOID:3498,2.28e-07,2;DOID:7,2.34e-07,39;DOID:3350,2.91e-07,2;DOID:3493,4.98e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.17e-29!9;UBERON:0003343!2.01e-17!4;UBERON:0004785!2.01e-17!4;UBERON:0001557!1.12e-16!19;UBERON:0003729!5.74e-14!5;UBERON:0000344!1.24e-12!12;UBERON:0008947!1.46e-11!38;UBERON:0003258!1.46e-11!38;UBERON:0000072!5.77e-11!46;UBERON:0001007!1.76e-10!155;UBERON:0001555!1.76e-10!155;UBERON:0007026!1.76e-10!155;UBERON:0004119!3.64e-10!169;UBERON:0000925!3.64e-10!169;UBERON:0006595!3.64e-10!169;UBERON:0001004!4.53e-10!72;UBERON:0000065!3.40e-09!53;UBERON:0001041!5.31e-09!98;UBERON:0004921!7.44e-09!129;UBERON:0004185!7.44e-09!129;UBERON:0000077!8.83e-09!130;UBERON:0000473!2.98e-08!8;UBERON:0000974!5.09e-07!10;UBERON:0003133!5.22e-07!48 | |ontology_enrichment_uberon=UBERON:0001737!2.17e-29!9;UBERON:0003343!2.01e-17!4;UBERON:0004785!2.01e-17!4;UBERON:0001557!1.12e-16!19;UBERON:0003729!5.74e-14!5;UBERON:0000344!1.24e-12!12;UBERON:0008947!1.46e-11!38;UBERON:0003258!1.46e-11!38;UBERON:0000072!5.77e-11!46;UBERON:0001007!1.76e-10!155;UBERON:0001555!1.76e-10!155;UBERON:0007026!1.76e-10!155;UBERON:0004119!3.64e-10!169;UBERON:0000925!3.64e-10!169;UBERON:0006595!3.64e-10!169;UBERON:0001004!4.53e-10!72;UBERON:0000065!3.40e-09!53;UBERON:0001041!5.31e-09!98;UBERON:0004921!7.44e-09!129;UBERON:0004185!7.44e-09!129;UBERON:0000077!8.83e-09!130;UBERON:0000473!2.98e-08!8;UBERON:0000974!5.09e-07!10;UBERON:0003133!5.22e-07!48 | ||
|ontology_enrichment_uberon_v019=UBERON:0004645;3.54e-13;1!UBERON:0001256;3.54e-13;1!UBERON:0001259;3.54e-13;1!UBERON:0004913;6.06e-13;1!UBERON:0003703;6.06e-13;1!UBERON:0001174;6.06e-13;1!UBERON:0004914;6.06e-13;1!UBERON:0002394;1.13e-12;4!UBERON:0003928;1.13e-12;4!UBERON:0000058;2.89e-11;10!UBERON:0002294;1.27e-07;7!UBERON:0001173;1.27e-07;7!UBERON:0004903;2.15e-07;2!UBERON:0002173;2.15e-07;2!UBERON:0002186;2.15e-07;2!UBERON:0001255;3.18e-07;2!UBERON:0001556;3.18e-07;2!UBERON:0006562;5.28e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0004645;3.54e-13;1!UBERON:0001256;3.54e-13;1!UBERON:0001259;3.54e-13;1!UBERON:0004913;6.06e-13;1!UBERON:0003703;6.06e-13;1!UBERON:0001174;6.06e-13;1!UBERON:0004914;6.06e-13;1!UBERON:0002394;1.13e-12;4!UBERON:0003928;1.13e-12;4!UBERON:0000058;2.89e-11;10!UBERON:0002294;1.27e-07;7!UBERON:0001173;1.27e-07;7!UBERON:0004903;2.15e-07;2!UBERON:0002173;2.15e-07;2!UBERON:0002186;2.15e-07;2!UBERON:0001255;3.18e-07;2!UBERON:0001556;3.18e-07;2!UBERON:0006562;5.28e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,3.33e-13,1;UBERON:0001256,3.33e-13,1;UBERON:0001259,3.33e-13,1;UBERON:0004913,6.06e-13,1;UBERON:0003703,6.06e-13,1;UBERON:0001174,6.06e-13,1;UBERON:0004914,6.06e-13,1;UBERON:0002394,9.63e-09,6;UBERON:0003928,9.63e-09,6;UBERON:0004903,2.15e-07,2;UBERON:0002173,2.15e-07,2;UBERON:0002186,2.15e-07,2;UBERON:0001255,3.09e-07,2;UBERON:0001556,3.09e-07,2 | |||
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| ||
|short_description=p@chr6:145244699..145244732,+ | |short_description=p@chr6:145244699..145244732,+ | ||
}} | }} |
Latest revision as of 20:33, 30 July 2015
Short description: | p@chr6:145244699..145244732, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:145244699..145244732, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 3.33e-13 | 1 |
lower urinary tract cell | 3.33e-13 | 1 |
epithelial cell of pancreas | 4.78e-13 | 4 |
endodermal cell | 3.74e-12 | 58 |
endo-epithelial cell | 1.09e-09 | 42 |
epithelial cell of uterus | 6.26e-09 | 6 |
stromal cell of endometrium | 6.26e-09 | 6 |
epithelial cell | 1.80e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 3.33e-13 | 1 |
wall of urinary bladder | 3.33e-13 | 1 |
mucosa of urinary bladder | 3.33e-13 | 1 |
hepatopancreatic ampulla | 6.06e-13 | 1 |
extrahepatic bile duct | 6.06e-13 | 1 |
common bile duct | 6.06e-13 | 1 |
duodenal papilla | 6.06e-13 | 1 |
bile duct | 9.63e-09 | 6 |
digestive system duct | 9.63e-09 | 6 |
bronchoalveolar duct junction | 2.15e-07 | 2 |
alveolar duct | 2.15e-07 | 2 |
bronchiole | 2.15e-07 | 2 |
urinary bladder | 3.09e-07 | 2 |
lower urinary tract | 3.09e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.45e-24 | 2 |
carcinoma | 5.93e-23 | 106 |
cell type cancer | 4.84e-19 | 143 |
adenocarcinoma | 1.46e-16 | 25 |
epithelioid sarcoma | 2.95e-13 | 1 |
pancreatic cancer | 4.78e-13 | 4 |
cystadenocarcinoma | 7.68e-13 | 1 |
mucinous cystadenocarcinoma | 7.68e-13 | 1 |
cancer | 9.56e-11 | 235 |
disease of cellular proliferation | 1.77e-10 | 239 |
endocrine gland cancer | 5.35e-09 | 6 |
female reproductive endometrioid cancer | 6.26e-09 | 6 |
squamous cell carcinoma | 5.44e-08 | 14 |
lung adenocarcinoma | 2.15e-07 | 2 |
pancreas adenocarcinoma | 2.28e-07 | 2 |
pancreatic carcinoma | 2.28e-07 | 2 |
pancreatic ductal adenocarcinoma | 2.28e-07 | 2 |
disease of anatomical entity | 2.34e-07 | 39 |
mesenchymal cell neoplasm | 2.91e-07 | 2 |
signet ring cell adenocarcinoma | 4.98e-07 | 2 |