FFCP PHASE1:Hg19::chr6:135501708..135501716,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:135501708..135501716,+ | |||
|coexpression_cluster_id=C440 | |coexpression_cluster_id=C440 | ||
|description=CAGE_peak_at_chr6:135501708..135501716,+ | |description=CAGE_peak_at_chr6:135501708..135501716,+ | ||
|id=chr6:135501708..135501716,+ | |id=chr6:135501708..135501716,+ | ||
|ontology_enrichment_celltype=CL:0000763;1.00e-09;100!CL:0000785;8.12e-08;1!CL:0000819;8.12e-08;1 | |ontology_enrichment_celltype=CL:0000037!1.74e-28!172;CL:0000566!1.74e-28!172;CL:0000988!4.66e-28!182;CL:0002032!1.13e-25!165;CL:0000837!1.13e-25!165;CL:0000763!5.07e-19!112;CL:0000049!5.07e-19!112;CL:0000738!3.50e-09!140;CL:0002087!6.43e-08!119;CL:0002031!6.50e-08!124;CL:0000134!5.53e-07!358 | ||
| | |ontology_enrichment_celltype_v019=CL:0000763;1.00e-09;100!CL:0000785;8.12e-08;1!CL:0000819;8.12e-08;1 | ||
|ontology_enrichment_disease=DOID:8692;7.57e-65;31!DOID:1240;1.89e-50;39!DOID:2531;2.52e-36;51!DOID:0060083;2.52e-36;51!DOID:9119;2.61e-08;1!DOID:1036;4.56e-08;8!DOID:0060073;8.12e-08;1!DOID:8675;8.12e-08;1!DOID:8552;8.12e-08;1!DOID:225;8.12e-08;1!DOID:0050686;1.16e-07;137!DOID:5093;1.46e-07;4!DOID:1612;1.46e-07;4 | |ontology_enrichment_celltype_v019_2=CL:0000763,1.58e-16,108;CL:0000049,1.58e-16,108;CL:0002032,7.61e-16,161;CL:0000837,7.61e-16,161;CL:0000037,5.19e-15,168;CL:0000988,4.92e-14,177;CL:0000819,1.06e-07,1 | ||
|ontology_enrichment_development_v019=CL:0000049;9.17e-08;108 | |||
|ontology_enrichment_disease=DOID:1240!4.60e-51!39;DOID:2531!3.49e-44!51;DOID:0060083!3.49e-44!51;DOID:8692!1.20e-41!31;DOID:0050686!1.11e-18!137;DOID:162!4.87e-12!235;DOID:1036!1.58e-11!8;DOID:14566!1.81e-11!239;DOID:5093!6.22e-08!4;DOID:1612!6.22e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:8692;7.57e-65;31!DOID:1240;1.89e-50;39!DOID:2531;2.52e-36;51!DOID:0060083;2.52e-36;51!DOID:9119;2.61e-08;1!DOID:1036;4.56e-08;8!DOID:0060073;8.12e-08;1!DOID:8675;8.12e-08;1!DOID:8552;8.12e-08;1!DOID:225;8.12e-08;1!DOID:0050686;1.16e-07;137!DOID:5093;1.46e-07;4!DOID:1612;1.46e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.35e-67,31;DOID:1240,3.35e-65,39;DOID:2531,1.58e-59,51;DOID:0060083,1.58e-59,51;DOID:0050686,6.62e-26,137;DOID:162,3.30e-13,235;DOID:14566,7.77e-13,239;DOID:9119,2.35e-08,1;DOID:1036,4.91e-08,8;DOID:8552,6.19e-08,1;DOID:225,7.59e-08,1;DOID:0060073,1.06e-07,1;DOID:8675,1.06e-07,1;DOID:5093,1.18e-07,4;DOID:1612,1.18e-07,4 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687720651731561,0.328402357799783,0.236132343941038,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0.485168122375632,0,0,0.309706370895104,0.28769239232215,0,0.236482229888585,0,0.645484683583826,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37061319387782,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.577076851905779,0.142283686696828,0.318852545457645,3.19326994292507,0.383010740264733,3.38677732358213,1.62310970137278,2.24637742490767,5.70586697582981,4.0736772900986,5.01268954180134,0.50787533340481,1.605880751037,2.01799707191048,2.12923118845163,3.09154810280188,0.614481528616916,2.01308497103174,0.667396566847634,1.36771666781428,0.278406173895242,0,0,3.99686361597384,0,0,0,0,0.780103689942349,0,0,0,0,0,0,0,1.81284261649436,0,0.19924798825107,0,0,0,0,0,0,0,17.3934605877136,0,0,0,0,0,0,0.260427761085233,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04386596391473,2.66866435871542,1.66211681900156,0.676786981851542,0.784250137270958,0.839107934879214,0,1.27149263184303,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,1.27718352450966,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0.290268993867255,0,0.0821154570532092,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0.83088067605837,0,0.77380195455795,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,1.32506888912221,0,0,0,0,0.106787412567695,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0.79994958341972,1.49368421571797,0,0,0,0,0,0,0,0,0.109209638192014,0,0.212574920101683,0,0,0,8.59593020513661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,2.58636007709779,0.118920090777569,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0.126698501011437,0,0,0.18378979906969,0,0,0,0,0,0,0,0.968833647540092,1.30356900021302,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687720651731561,0.328402357799783,0.236132343941038,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0.485168122375632,0,0,0.309706370895104,0.28769239232215,0,0.236482229888585,0,0.645484683583826,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37061319387782,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.577076851905779,0.142283686696828,0.318852545457645,3.19326994292507,0.383010740264733,3.38677732358213,1.62310970137278,2.24637742490767,5.70586697582981,4.0736772900986,5.01268954180134,0.50787533340481,1.605880751037,2.01799707191048,2.12923118845163,3.09154810280188,0.614481528616916,2.01308497103174,0.667396566847634,1.36771666781428,0.278406173895242,0,0,3.99686361597384,0,0,0,0,0.780103689942349,0,0,0,0,0,0,0,1.81284261649436,0,0.19924798825107,0,0,0,0,0,0,0,17.3934605877136,0,0,0,0,0,0,0.260427761085233,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04386596391473,2.66866435871542,1.66211681900156,0.676786981851542,0.784250137270958,0.839107934879214,0,1.27149263184303,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,1.27718352450966,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0.290268993867255,0,0.0821154570532092,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0.83088067605837,0,0.77380195455795,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,1.32506888912221,0,0,0,0,0.106787412567695,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0.79994958341972,1.49368421571797,0,0,0,0,0,0,0,0,0.109209638192014,0,0.212574920101683,0,0,0,8.59593020513661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,2.58636007709779,0.118920090777569,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0.126698501011437,0,0,0.18378979906969,0,0,0,0,0,0,0,0.968833647540092,1.30356900021302,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p@chr6:135501708..135501716,+ | |short_description=p@chr6:135501708..135501716,+ | ||
}} | }} |
Latest revision as of 19:46, 30 July 2015
Short description: | p@chr6:135501708..135501716, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:135501708..135501716, + |
Coexpression cluster: | C440_biphenotypic_acute_immature_splenic_B_myelodysplastic_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.58e-16 | 108 |
common myeloid progenitor | 1.58e-16 | 108 |
hematopoietic oligopotent progenitor cell | 7.61e-16 | 161 |
hematopoietic multipotent progenitor cell | 7.61e-16 | 161 |
hematopoietic stem cell | 5.19e-15 | 168 |
hematopoietic cell | 4.92e-14 | 177 |
B-1 B cell | 1.06e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.35e-67 | 31 |
leukemia | 3.35e-65 | 39 |
hematologic cancer | 1.58e-59 | 51 |
immune system cancer | 1.58e-59 | 51 |
organ system cancer | 6.62e-26 | 137 |
cancer | 3.30e-13 | 235 |
disease of cellular proliferation | 7.77e-13 | 239 |
acute myeloid leukemia | 2.35e-08 | 1 |
chronic leukemia | 4.91e-08 | 8 |
chronic myeloid leukemia | 6.19e-08 | 1 |
syndrome | 7.59e-08 | 1 |
lymphatic system cancer | 1.06e-07 | 1 |
lymphosarcoma | 1.06e-07 | 1 |
thoracic cancer | 1.18e-07 | 4 |
breast cancer | 1.18e-07 | 4 |