FFCP PHASE1:Hg19::chr6:132271546..132271561,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:132271546..132271561,- to FFCP PHASE1:Hg19::chr6:132271546..132271561,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:132271546..132271561,- | |||
|coexpression_cluster_id=C506 | |||
|description=CAGE_peak_at_chr6:132271546..132271561,- | |||
|id=chr6:132271546..132271561,- | |||
|ontology_enrichment_celltype=CL:0000055!1.31e-22!180;CL:0000222!7.47e-22!119;CL:0000220!3.39e-13!246;CL:0002321!8.69e-13!248;CL:0002139!2.51e-12!24;CL:0000213!3.72e-12!57;CL:0000215!3.72e-12!57;CL:0000057!3.78e-12!75;CL:0000359!4.93e-12!32;CL:0000115!5.28e-12!35;CL:0002078!6.76e-12!44;CL:0000680!1.93e-11!57;CL:0000056!1.93e-11!57;CL:0000355!1.93e-11!57;CL:0000183!5.74e-11!59;CL:0000187!1.29e-10!54;CL:0002371!7.44e-10!591;CL:0000192!1.68e-09!42;CL:0000514!1.68e-09!42;CL:0000144!2.11e-09!625;CL:0000071!3.91e-09!18;CL:0002546!3.91e-09!18;CL:0000393!9.05e-09!60;CL:0000211!9.05e-09!60;CL:0002494!2.39e-08!16;CL:0002334!4.26e-08!12;CL:1000413!2.62e-07!9;CL:0000548!7.92e-07!679;CL:0000004!7.92e-07!679;CL:0000255!7.92e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0002139;7.25e-17;24!CL:0000115;1.29e-16;36!CL:0002078;3.46e-13;45!CL:0000071;5.56e-12;18!CL:1000413;1.26e-10;9!CL:0002334;3.20e-10;12!CL:0002494;1.63e-08;16!CL:0000359;4.96e-08;32!CL:0000213;2.32e-07;58!CL:0000215;2.32e-07;58!CL:0002548;3.98e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.71e-19,36;CL:0002078,3.27e-18,45;CL:0002139,6.72e-17,24;CL:0000222,1.69e-13,121;CL:0000213,1.25e-12,58;CL:0000215,1.25e-12,58;CL:0000071,2.76e-12,18;CL:0002546,2.76e-12,18;CL:1000413,8.88e-11,9;CL:0000057,1.89e-10,76;CL:0002334,2.61e-10,12;CL:0002494,1.86e-08,16;CL:0000359,3.82e-08,32;CL:0002548,2.98e-07,6;CL:0002321,7.12e-07,250 | |||
|ontology_enrichment_development_v019=CL:0002546;5.56e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.95e-28!79;UBERON:0007798!2.95e-28!79;UBERON:0004872!4.10e-28!84;UBERON:0000055!2.24e-25!69;UBERON:0004535!3.36e-23!110;UBERON:0001981!3.53e-23!60;UBERON:0007500!3.53e-23!60;UBERON:0004537!3.53e-23!60;UBERON:0006965!3.53e-23!60;UBERON:0003914!5.18e-22!118;UBERON:0001009!9.38e-22!113;UBERON:0001637!3.04e-20!42;UBERON:0003509!3.04e-20!42;UBERON:0004572!3.04e-20!42;UBERON:0004573!2.27e-16!33;UBERON:0004571!2.27e-16!33;UBERON:0000490!5.61e-15!138;UBERON:0005256!7.23e-13!143;UBERON:0002100!7.51e-12!216;UBERON:0002385!1.41e-11!63;UBERON:0001015!1.41e-11!63;UBERON:0000383!1.41e-11!63;UBERON:0000914!2.09e-11!83;UBERON:0002329!2.09e-11!83;UBERON:0003077!2.09e-11!83;UBERON:0003059!2.09e-11!83;UBERON:0007282!2.09e-11!83;UBERON:0009618!2.09e-11!83;UBERON:0007285!2.09e-11!83;UBERON:0001134!3.86e-11!61;UBERON:0002036!3.86e-11!61;UBERON:0003082!3.86e-11!61;UBERON:0006914!1.66e-10!25;UBERON:0004290!1.74e-10!70;UBERON:0000947!7.22e-10!21;UBERON:0010191!7.22e-10!21;UBERON:0000477!1.00e-09!286;UBERON:0000119!1.14e-09!312;UBERON:0000487!1.84e-09!22;UBERON:0001986!3.91e-09!18;UBERON:0004638!3.91e-09!18;UBERON:0004852!3.91e-09!18;UBERON:0000483!4.01e-09!309;UBERON:0000486!9.25e-09!82;UBERON:0000025!5.03e-08!194;UBERON:0004111!6.07e-08!241;UBERON:0000475!1.21e-07!365;UBERON:0003915!2.62e-07!9;UBERON:0004700!2.62e-07!9;UBERON:0001917!2.62e-07!9;UBERON:0000926!3.28e-07!448;UBERON:0004120!3.28e-07!448;UBERON:0006603!3.28e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.10e-16;42!UBERON:0003509;3.10e-16;42!UBERON:0004572;3.10e-16;42!UBERON:0004573;2.14e-14;33!UBERON:0004571;2.14e-14;33!UBERON:0000055;2.09e-13;65!UBERON:0006914;2.71e-12;25!UBERON:0004638;5.56e-12;18!UBERON:0001986;5.56e-12;18!UBERON:0004852;5.56e-12;18!UBERON:0004457;9.60e-12;9!UBERON:0000042;9.60e-12;9!UBERON:0007500;1.22e-11;56!UBERON:0001981;1.22e-11;56!UBERON:0004537;1.22e-11;56!UBERON:0003688;2.54e-11;6!UBERON:0002358;2.54e-11;6!UBERON:0003684;2.54e-11;6!UBERON:0001178;2.54e-11;6!UBERON:0000487;4.79e-11;22!UBERON:0003915;1.26e-10;9!UBERON:0004700;1.26e-10;9!UBERON:0001917;1.26e-10;9!UBERON:0002049;1.49e-09;75!UBERON:0007798;1.49e-09;75!UBERON:0003914;5.20e-09;74!UBERON:0003513;1.96e-08;7!UBERON:0000947;1.13e-07;21!UBERON:0010191;1.13e-07;21!UBERON:0000948;7.22e-07;22!UBERON:0004535;7.32e-07;109 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,2.38e-26,83;UBERON:0000055,1.02e-25,68;UBERON:0002049,1.48e-23,78;UBERON:0007798,1.48e-23,78;UBERON:0007500,5.36e-23,59;UBERON:0001981,5.36e-23,59;UBERON:0004537,5.36e-23,59;UBERON:0006965,5.36e-23,59;UBERON:0004535,4.04e-22,109;UBERON:0001009,3.86e-21,112;UBERON:0001637,4.76e-20,42;UBERON:0003509,4.76e-20,42;UBERON:0004572,4.76e-20,42;UBERON:0003914,7.09e-20,117;UBERON:0004573,2.32e-15,33;UBERON:0004571,2.32e-15,33;UBERON:0006914,1.64e-12,25;UBERON:0004638,2.76e-12,18;UBERON:0001986,2.76e-12,18;UBERON:0004852,2.76e-12,18;UBERON:0003688,2.35e-11,6;UBERON:0002358,2.35e-11,6;UBERON:0003684,2.35e-11,6;UBERON:0001178,2.35e-11,6;UBERON:0000487,2.59e-11,22;UBERON:0003915,8.88e-11,9;UBERON:0004700,8.88e-11,9;UBERON:0001917,8.88e-11,9;UBERON:0003081,5.89e-09,203;UBERON:0004457,2.51e-08,12;UBERON:0000042,2.51e-08,12;UBERON:0003513,2.52e-08,7;UBERON:0004111,5.86e-08,240;UBERON:0000025,6.12e-08,192;UBERON:0000947,9.89e-08,21;UBERON:0010191,9.89e-08,21;UBERON:0000926,1.07e-07,315;UBERON:0004120,1.07e-07,315;UBERON:0006603,1.07e-07,315;UBERON:0000948,2.79e-07,24;UBERON:0005498,2.79e-07,24;UBERON:0004140,2.79e-07,24;UBERON:0009881,2.79e-07,24;UBERON:0004141,2.79e-07,24;UBERON:0003084,2.79e-07,24;UBERON:0007005,2.79e-07,24;UBERON:0004139,2.79e-07,24;UBERON:0004291,2.79e-07,24 | |||
|phase1_expression=3.45188920614058,5.78071414505655,3.38290569830331,10.007329835313,4.91657203870017,17.4467704820074,5.06599756336621,0,0,0.491467873003018,0,0,0,0.618831764800233,0.994192127183747,3.36162573225888,4.82155622419182,0.730310090387373,0.975865597581014,0,1.02000345622126,0.313454721478088,0.85870796139317,0.410623275218653,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,0.895037932904712,2.1686349143074,0,0.724232594804119,3.1811437882044,5.35298357332899,0.472674085820339,1.55210578223795,0.966182642624386,0.130979075497713,0,0,0,0,0,0,0,0,0.79504962946682,1.72046919021225,1.38856200643038,1.13061588384802,1.67799774483962,3.85165258716094,3.13492449805216,0.516833518338658,1.06729878806013,1.00416183829401,1.61131726843659,1.52054421143703,2.92874469057803,2.20597848207521,10.5318453224629,1.42879565254528,0,0.788280363383256,1.53316637465883,0,0.916008719652036,0,0,0,6.95760732373446,3.03913227994991,0.794455084879313,6.88407889797153,0.354668382198357,3.36406560085384,3.20246987189115,3.94668077467456,0.311211035399766,1.61652806483626,2.45192854670188,0.454072282934794,0.576175924479999,0.234321431833797,0,0.570471821544449,0,0.117434498643765,0.161872944368132,0.280901613404497,0.204154171254893,0,0,0,2.22540236350701,0,0.718618141816238,0,0,0.277064115484183,0.877955241761676,9.50112166976961,1.35214253015937,1.81491493056034,1.79389635688862,0,0.211931901159562,0.900273288253207,0.618315175430633,0.772921620136887,1.11670113798954,0.168776332241266,1.55899208257918,0.252433774244115,0.0920498986422993,0.161646056818812,1.42003837006646,1.41052937518696,0.508681776931463,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0.643240938192885,0,2.3218396401599,2.16563844500876,0,0,0,0,0,0,0,0,0,2.21446636387394,2.80483547606892,0,0,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,0,0,0,0,0,0.70445216541493,1.29929802984966,3.70388410061289,3.04406643575357,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,1.71072446022705,0.205654985406647,0,0,0.224262168690721,0.87192013766656,0.4400297149257,0.387815147273333,3.57656445851882,1.690605505112,1.59562869950922,0,0,0,0.266422179016099,0.857867961948885,0,0,0,1.06617584622764,0.791951872933429,0,0,0.399891964728228,0,0,0,1.19812427745791,1.14861935834114,0,0.579125226670317,0.61642896765115,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,1.00034104211935,0.271265023699736,3.53550464602372,6.78030157429215,3.15404830067869,3.5142424497814,1.50473049863859,0,0,1.32845119707087,1.65932251687533,0.173767228936166,0,0,0,0,0,0.303127571446259,1.66435439510497,0.30239029332968,2.48107807818777,1.68808170616869,4.77122160536225,2.69092213436972,4.09365799253363,6.91671860917512,8.90508398669946,1.07946785661859,1.59805552781814,0.0821271560138091,0.519254429183621,0.348631135379878,0.362578348774867,1.40354529212299,0,0.114814448164607,0.364182336013434,0.524497659837696,0,0.0770153371044148,0,0,0.316654886678627,3.4120015221269,1.53084334748864,2.59099099322567,3.08454505380579,0.812839312631559,1.00337954770971,0,0,0,0,0,0,1.64007322849853,0.325378394664303,0.206082023295445,0,0,0,0.650060246036521,4.82051789532479,0,0.770243085573222,0.614014698904518,0.689182862422653,0,0.145016693914229,0.170453254832202,0.0890320356467374,0,0,0.255225424989168,0,0.464845549297286,7.24068397710472,0,0.308033580176089,0,0.869932992075073,1.11194531462352,2.57624796135584,0.744316738719335,0.632758849437452,1.5250415513906,0.511795582622668,0,0.318203247925937,4.70969184119538,0.539617372749944,0.274537029736055,0.471249609382746,1.41527737101321,3.17020642346017,0.421258456238981,0,1.21856744815642,2.11300293513511,0,0,0,0.551365343546124,4.64407282668854,3.5076070820301,0,0,0.811641507850816,1.54911749049875,1.97186921772569,0,0.392996164052485,0.7133421029625,0,1.26664581178598,1.31717957183961,0.379473173765715,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0.606802608747567,0,0.284136146806413,0.23874448473769,0,0,0,0.140669416410513,0.111308705022906,0,0,1.79323189425963,0,0,1.22722419002586,0,8.08702927920699,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0.10893846351899,0,0.769502585037971,0.797594390929008,0,0,0,0,1.09917112082235,1.06606955203727,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.379119477770928,0,0,0,0.661983911750998,0,0,0,0,0.347119476670262,0,0.0870592065804026,0.17472666824203,0,0,0,0,0,0.441280633457501,0,0,0,0,0,0.160317640503067,0.213452994739353,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0.104602846312333,0.101998217636322,0.288950589901519,0,0,0,1.289296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| ||
|short_description=p@chr6:132271546..132271561,- | |||
}} | }} |
Latest revision as of 19:29, 30 July 2015
Short description: | p@chr6:132271546..132271561, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:132271546..132271561, - |
Coexpression cluster: | C506_Smooth_Renal_Endothelial_hepatic_Adipocyte_Fibroblast_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.71e-19 | 36 |
meso-epithelial cell | 3.27e-18 | 45 |
endothelial cell of vascular tree | 6.72e-17 | 24 |
mesodermal cell | 1.69e-13 | 121 |
lining cell | 1.25e-12 | 58 |
barrier cell | 1.25e-12 | 58 |
blood vessel endothelial cell | 2.76e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.76e-12 | 18 |
endothelial cell of artery | 8.88e-11 | 9 |
fibroblast | 1.89e-10 | 76 |
preadipocyte | 2.61e-10 | 12 |
cardiocyte | 1.86e-08 | 16 |
vascular associated smooth muscle cell | 3.82e-08 | 32 |
cardiac fibroblast | 2.98e-07 | 6 |
embryonic cell | 7.12e-07 | 250 |