FFCP PHASE1:Hg19::chr6:12296671..12296685,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr6:12296671..12296685,+ to FFCP PHASE1:Hg19::chr6:12296671..12296685,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:12296671..12296685,+ | |||
|coexpression_cluster_id=C4552 | |||
|description=CAGE_peak_at_chr6:12296671..12296685,+ | |||
|id=chr6:12296671..12296685,+ | |||
|ontology_enrichment_celltype=CL:0002139!5.64e-15!24;CL:0000115!1.21e-09!35;CL:0005020!4.17e-09!6;CL:0002138!4.17e-09!6;CL:0005022!4.17e-09!6;CL:0000071!1.53e-08!18;CL:0002546!1.53e-08!18;CL:0000213!1.81e-08!57;CL:0000215!1.81e-08!57;CL:0000066!2.12e-08!254;CL:0000076!2.59e-08!62 | |||
|ontology_enrichment_celltype_v019=CL:0002138;8.44e-37;6!CL:0002139;3.72e-35;24!CL:0000115;2.09e-24;36!CL:0002078;2.63e-16;45!CL:0002144;4.60e-13;3!CL:0000071;4.08e-12;18!CL:1000306;1.17e-09;4!CL:0002547;1.17e-09;4!CL:0000213;4.97e-09;58!CL:0000215;4.97e-09;58!CL:0002537;6.76e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.14e-36,6;CL:0002138,1.14e-36,6;CL:0005022,1.14e-36,6;CL:0002139,3.23e-35,24;CL:0000115,6.35e-28,36;CL:0002078,5.40e-22,45;CL:0000213,1.14e-16,58;CL:0000215,1.14e-16,58;CL:0002144,4.61e-13,3;CL:0000071,3.38e-12,18;CL:0002546,3.38e-12,18;CL:1000306,1.39e-09,4;CL:0002547,1.39e-09,4;CL:0000222,1.79e-08,121;CL:0002537,5.69e-08,5 | |||
|ontology_enrichment_development_v019=CL:0005022;8.44e-37;6!CL:0002546;4.08e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;6.91e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,4.85e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000055!3.58e-11!69;UBERON:0002049!4.25e-11!79;UBERON:0007798!4.25e-11!79;UBERON:0001986!1.53e-08!18;UBERON:0004638!1.53e-08!18;UBERON:0004852!1.53e-08!18;UBERON:0001009!2.10e-08!113;UBERON:0004535!2.30e-08!110;UBERON:0001981!6.61e-08!60;UBERON:0007500!6.61e-08!60;UBERON:0004537!6.61e-08!60;UBERON:0006965!6.61e-08!60;UBERON:0001637!1.58e-07!42;UBERON:0003509!1.58e-07!42;UBERON:0004572!1.58e-07!42;UBERON:0004872!2.95e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;1.33e-27;8!UBERON:0004536;1.33e-27;8!UBERON:0006558;1.33e-27;8!UBERON:0002465;4.46e-22;10!UBERON:0000055;6.92e-14;65!UBERON:0010523;4.60e-13;3!UBERON:0001915;4.60e-13;3!UBERON:0001982;4.60e-13;3!UBERON:0004638;4.08e-12;18!UBERON:0001986;4.08e-12;18!UBERON:0004852;4.08e-12;18!UBERON:0000487;6.95e-10;22!UBERON:0002049;1.06e-09;75!UBERON:0007798;1.06e-09;75!UBERON:0004797;1.17e-09;4!UBERON:0000415;1.17e-09;4!UBERON:0007240;1.17e-09;4!UBERON:0005742;1.17e-09;4!UBERON:0005734;1.17e-09;4!UBERON:0004664;1.17e-09;4!UBERON:0004663;1.17e-09;4!UBERON:0006914;1.12e-08;25!UBERON:0002405;4.36e-08;27!UBERON:0000490;7.36e-08;33!UBERON:0000947;8.03e-07;21!UBERON:0010191;8.03e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.66e-27,8;UBERON:0004536,1.66e-27,8;UBERON:0006558,1.66e-27,8;UBERON:0002465,5.33e-22,10;UBERON:0000055,1.47e-19,68;UBERON:0002049,9.00e-17,78;UBERON:0007798,9.00e-17,78;UBERON:0010523,4.61e-13,3;UBERON:0001915,4.61e-13,3;UBERON:0001982,4.61e-13,3;UBERON:0004638,3.38e-12,18;UBERON:0001986,3.38e-12,18;UBERON:0004852,3.38e-12,18;UBERON:0004535,2.25e-11,109;UBERON:0001009,5.20e-11,112;UBERON:0000487,5.97e-10,22;UBERON:0000415,1.39e-09,4;UBERON:0007240,1.39e-09,4;UBERON:0005742,1.39e-09,4;UBERON:0005734,1.39e-09,4;UBERON:0004664,1.39e-09,4;UBERON:0004663,1.39e-09,4;UBERON:0006914,9.81e-09,25;UBERON:0007500,1.89e-08,59;UBERON:0001981,1.89e-08,59;UBERON:0004537,1.89e-08,59;UBERON:0006965,1.89e-08,59;UBERON:0000947,8.96e-07,21;UBERON:0010191,8.96e-07,21 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,1.20538905604795,0.730310090387373,0.487932798790507,0,0,0,0,0,0.125542639594803,0.229240217243854,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,1.29096936716765,0,0,0,0,0.918251677112708,0.641858054152187,0.639337125799041,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0.144846518960824,0,0,0,0.443458794925128,0.790513071238134,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0,0.694281003215189,0.56530794192401,0.838998872419812,1.92582629358047,0.208994966536811,0.516833518338658,1.06729878806013,2.00832367658802,3.22263453687318,0,5.12530320851156,2.20597848207521,0,0.535798369704479,0,0.337834441449967,0,0,1.28241220751285,0,0,0,0,1.2663051166458,0.662045904066094,2.0078563452417,0,0,0,0.24666754841716,0,0.134710672069688,0.490385709340376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794025282120147,0.179389635688862,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0.710019185033229,0.10075209822764,0,0,0.272746120590835,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.857839051492628,0,0,0.201057944823262,0,0,0,1.44331342025273,0.231860809950154,0.234817388471643,2.7429625074604,3.24089858803628,8.75169100279152,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0.170093705276516,3.02282282542995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0,0,0.94443704049192,0,0,0,0,0.37064843820784,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0.405820753925408,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,1.90995587790152,0.296964680832639,2.15012491469462,0.994147647766298,0,0,0.16480387422676,1.26675244876796,0,0,0,0.306806047506464,0,0.622079175323615,0.179736702294654,0.537063524026827,0,0,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,0,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.424059214301822,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0.30607276163049,0,0,0,0,0,0,0,0,0.277349346026277,0.173559738335131,0.0979923974143777,0.174118413160805,0,0.171986032471617,0,0,0.0821154570532092,0,0.441280633457501,0.225980740780532,0,0,0,0.195551382734803,0.0801588202515337,0,0.19980960958213,0,0.114536596165916,0,0,0,0,0.271808412147228,0.104602846312333,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.732157589411779,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310874401165561,0.147855149989634,0.159296767163702,0,0,0,0.265841714557995,0,0,0,0,0.363697318405119,0,0,0,0.400027764663154,0,0,0,0,0,0,0.680117776536817,0,0.244736704506468,0.358177682162975,0.617602894321944,0.219284049578707,0.176689145945881,0,0,0,0,0,0.138258436151731,0.389720617678777,0,0,0,0.737318726261158,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0.0981477185010256,0,0.366857197043358,0.115525666150338,0,0,0,0,0.40341013740704,0,0,1.80149109261106,0.591424344868181,0,0,0,0,0,0,0,0,1.27762427639595,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0.280272163313789,0,0.431855182437243,0.47775168788705,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0,0,0,0,0,0,0.205325613712494,1.1598144313382,0.485710993059139,0,0,0.118920090777569,0,0,0.150962843566674,0,0.437119121007915,0,0,0,0,0,0,0.339854229375634,0,0.0644578879735772,0,0,0,0,0,0,0.286679166302903,0,0.0679914901909147,0,0,0,0,0.432626562123789,0.126166424835079,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0.224263725161227,0,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0.0898252021065869,0,0,0.406896178315738,0,0,0.320568492303233 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| ||
|short_description=p@chr6:12296671..12296685,+ | |||
}} | }} |
Latest revision as of 18:56, 30 July 2015
Short description: | p@chr6:12296671..12296685, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:12296671..12296685, + |
Coexpression cluster: | C4552_Lymphatic_Endothelial_Renal_pharyngeal_papillary_amniotic_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.14e-36 | 6 |
endothelial cell of lymphatic vessel | 1.14e-36 | 6 |
vascular lymphangioblast | 1.14e-36 | 6 |
endothelial cell of vascular tree | 3.23e-35 | 24 |
endothelial cell | 6.35e-28 | 36 |
meso-epithelial cell | 5.40e-22 | 45 |
lining cell | 1.14e-16 | 58 |
barrier cell | 1.14e-16 | 58 |
capillary endothelial cell | 4.61e-13 | 3 |
blood vessel endothelial cell | 3.38e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.38e-12 | 18 |
fibroblast of tunica adventitia of artery | 1.39e-09 | 4 |
fibroblast of the aortic adventitia | 1.39e-09 | 4 |
mesodermal cell | 1.79e-08 | 121 |
amnion mesenchymal stem cell | 5.69e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 1.66e-27 | 8 |
lymph vasculature | 1.66e-27 | 8 |
lymphatic part of lymphoid system | 1.66e-27 | 8 |
lymphoid system | 5.33e-22 | 10 |
vessel | 1.47e-19 | 68 |
vasculature | 9.00e-17 | 78 |
vascular system | 9.00e-17 | 78 |
microcirculatory vessel | 4.61e-13 | 3 |
endothelium of capillary | 4.61e-13 | 3 |
capillary | 4.61e-13 | 3 |
blood vessel endothelium | 3.38e-12 | 18 |
endothelium | 3.38e-12 | 18 |
cardiovascular system endothelium | 3.38e-12 | 18 |
cardiovascular system | 2.25e-11 | 109 |
circulatory system | 5.20e-11 | 112 |
simple squamous epithelium | 5.97e-10 | 22 |
artery wall | 1.39e-09 | 4 |
tunica adventitia of artery | 1.39e-09 | 4 |
adventitia | 1.39e-09 | 4 |
tunica adventitia of blood vessel | 1.39e-09 | 4 |
aorta tunica adventitia | 1.39e-09 | 4 |
aorta wall | 1.39e-09 | 4 |
squamous epithelium | 9.81e-09 | 25 |
epithelial tube open at both ends | 1.89e-08 | 59 |
blood vessel | 1.89e-08 | 59 |
blood vasculature | 1.89e-08 | 59 |
vascular cord | 1.89e-08 | 59 |
aorta | 8.96e-07 | 21 |
aortic system | 8.96e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 4.85e-10 | 1 |