FFCP PHASE1:Hg19::chr6:11755328..11755345,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:11755328..11755345,- | |||
|description=CAGE_peak_at_chr6:11755328..11755345,- | |description=CAGE_peak_at_chr6:11755328..11755345,- | ||
|id=chr6:11755328..11755345,- | |id=chr6:11755328..11755345,- | ||
|ontology_enrichment_celltype=CL:0000071!4.18e-15!18;CL:0002546!4.18e-15!18;CL:0002570!9.04e-13!8;CL:0002139!2.25e-12!24;CL:0000569!3.37e-09!4;CL:0000011!3.37e-09!4;CL:0002543!4.92e-09!6;CL:1000413!1.95e-08!9;CL:0002334!4.95e-08!12;CL:0000115!1.75e-07!35;CL:0002078!2.90e-07!44;CL:0002582!3.08e-07!3;CL:0002371!6.73e-07!591;CL:0000144!8.27e-07!625 | |ontology_enrichment_celltype=CL:0000071!4.18e-15!18;CL:0002546!4.18e-15!18;CL:0002570!9.04e-13!8;CL:0002139!2.25e-12!24;CL:0000569!3.37e-09!4;CL:0000011!3.37e-09!4;CL:0002543!4.92e-09!6;CL:1000413!1.95e-08!9;CL:0002334!4.95e-08!12;CL:0000115!1.75e-07!35;CL:0002078!2.90e-07!44;CL:0002582!3.08e-07!3;CL:0002371!6.73e-07!591;CL:0000144!8.27e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0002583;1.57e-14;2!CL:0002543;5.35e-11;6!CL:0002573;1.19e-10;2!CL:0000071;1.64e-09;18!CL:0002570;3.54e-08;8!CL:0002601;4.10e-08;1!CL:0000569;7.18e-08;4!CL:0000048;3.57e-07;58!CL:0002139;4.46e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002583,1.47e-14,2;CL:0002543,3.73e-11,6;CL:0002573,1.22e-10,2;CL:0000071,1.60e-09,18;CL:0002546,1.60e-09,18;CL:0002570,4.12e-08,8;CL:0002601,6.68e-08,1;CL:0000569,6.71e-08,4;CL:0000011,6.71e-08,4;CL:0002139,4.37e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002546;1.64e-09;18!CL:0000011;7.18e-08;4 | |||
|ontology_enrichment_disease=DOID:2394!7.04e-18!14;DOID:120!3.99e-11!27;DOID:193!3.97e-10!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;7.41e-24;14!DOID:120;5.58e-12;27!DOID:193;4.27e-11;29!DOID:0060085;1.05e-08;1!DOID:3165;1.05e-08;1!DOID:0060121;1.05e-08;1!DOID:2438;1.05e-08;1!DOID:4418;1.05e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.48e-24,14;DOID:120,5.22e-12,27;DOID:193,4.02e-11,29;DOID:0060085,1.05e-08,1;DOID:3165,1.05e-08,1;DOID:0060121,1.05e-08,1;DOID:2438,1.05e-08,1;DOID:4418,1.05e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001986!4.18e-15!18;UBERON:0004638!4.18e-15!18;UBERON:0004852!4.18e-15!18;UBERON:0006914!1.23e-13!25;UBERON:0000487!8.44e-12!22;UBERON:0000992!2.46e-10!13;UBERON:0002119!5.81e-10!4;UBERON:0004531!5.81e-10!4;UBERON:0003915!1.95e-08!9;UBERON:0004700!1.95e-08!9;UBERON:0001917!1.95e-08!9;UBERON:0001981!9.34e-08!60;UBERON:0007500!9.34e-08!60;UBERON:0004537!9.34e-08!60;UBERON:0006965!9.34e-08!60;UBERON:0002118!1.14e-07!5;UBERON:0004532!1.14e-07!5;UBERON:0004872!3.13e-07!84;UBERON:0002049!5.36e-07!79;UBERON:0007798!5.36e-07!79;UBERON:0000055!5.89e-07!69;UBERON:0001013!9.09e-07!14 | |ontology_enrichment_uberon=UBERON:0001986!4.18e-15!18;UBERON:0004638!4.18e-15!18;UBERON:0004852!4.18e-15!18;UBERON:0006914!1.23e-13!25;UBERON:0000487!8.44e-12!22;UBERON:0000992!2.46e-10!13;UBERON:0002119!5.81e-10!4;UBERON:0004531!5.81e-10!4;UBERON:0003915!1.95e-08!9;UBERON:0004700!1.95e-08!9;UBERON:0001917!1.95e-08!9;UBERON:0001981!9.34e-08!60;UBERON:0007500!9.34e-08!60;UBERON:0004537!9.34e-08!60;UBERON:0006965!9.34e-08!60;UBERON:0002118!1.14e-07!5;UBERON:0004532!1.14e-07!5;UBERON:0004872!3.13e-07!84;UBERON:0002049!5.36e-07!79;UBERON:0007798!5.36e-07!79;UBERON:0000055!5.89e-07!69;UBERON:0001013!9.09e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0000992;3.49e-19;13!UBERON:0002119;2.03e-16;4!UBERON:0002118;1.55e-13;5!UBERON:0000991;1.11e-11;21!UBERON:0004638;1.64e-09;18!UBERON:0001986;1.64e-09;18!UBERON:0004852;1.64e-09;18!UBERON:0003134;3.81e-08;33!UBERON:0000487;9.64e-08;22!UBERON:0001638;1.73e-07;9!UBERON:0003920;1.73e-07;9!UBERON:0004582;1.73e-07;9!UBERON:0003100;2.78e-07;41!UBERON:0006914;8.74e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,3.62e-19,13;UBERON:0002119,2.26e-16,4;UBERON:0002118,1.49e-13,5;UBERON:0000991,1.13e-11,21;UBERON:0009196,1.13e-11,21;UBERON:0009117,1.13e-11,21;UBERON:0005564,1.13e-11,21;UBERON:0004176,4.07e-11,22;UBERON:0004638,1.60e-09,18;UBERON:0001986,1.60e-09,18;UBERON:0004852,1.60e-09,18;UBERON:0003134,1.80e-08,37;UBERON:0000474,1.80e-08,37;UBERON:0000487,9.44e-08,22;UBERON:0001638,1.37e-07,9;UBERON:0003920,1.37e-07,9;UBERON:0004582,1.37e-07,9;UBERON:0003100,1.46e-07,41;UBERON:0006914,8.58e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0.290209238628584,1.70215567407342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0.347140501607594,0.56530794192401,0.838998872419812,0,1.04497483268405,0.258416759169329,0,0,0.805658634218294,0,0,3.30896772311282,0,0.267899184852239,0,0.112611480483322,1.53316637465883,1.89853131913626,4.58004359826018,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423863802319124,0,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0.219500570817251,1.1240175325762,1.91005047582099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0.845302752556,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.640695746278505,0,0,0,1.23367755042124,1.24293207719189,0.492762936082855,2.07701771673448,0.348631135379878,0,0,0.460404944679482,0,0,0.131124414959424,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0.532306030317022,0,0.18532421910392,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0.551365343546124,0.66343897524122,0,0,0,0,0,0,0,0,0,1.06428319221179,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22439575525196,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0.548167698587004,5.16657990427773,0,0,0,0,0,0,0,0,0,1.11827282008889,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.653174720218818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19403842309499,1.40227985908335,1.10961172300523,0.378806010550178,0.754703705257725,0.889811221596536,2.05956061557231,0.302461847526478,1.5543720058278,0.443565449968902,1.11507737014592,3.59842489730884,0.931577741257556,2.48823724704513,1.59505028734797,0,0.751288044986092,0.380805212168795,2.44122439922797,2.18218391043071,0.214821114084977,9.74470895744837,0,0,0.686791410365586,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0.358177682162975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,3.31329602045583,4.34588364271704,0,0,0.93061915699296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0.290209238628584,1.70215567407342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0.347140501607594,0.56530794192401,0.838998872419812,0,1.04497483268405,0.258416759169329,0,0,0.805658634218294,0,0,3.30896772311282,0,0.267899184852239,0,0.112611480483322,1.53316637465883,1.89853131913626,4.58004359826018,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423863802319124,0,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0.219500570817251,1.1240175325762,1.91005047582099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0.845302752556,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.640695746278505,0,0,0,1.23367755042124,1.24293207719189,0.492762936082855,2.07701771673448,0.348631135379878,0,0,0.460404944679482,0,0,0.131124414959424,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0.532306030317022,0,0.18532421910392,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0.551365343546124,0.66343897524122,0,0,0,0,0,0,0,0,0,1.06428319221179,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22439575525196,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0.548167698587004,5.16657990427773,0,0,0,0,0,0,0,0,0,1.11827282008889,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.653174720218818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19403842309499,1.40227985908335,1.10961172300523,0.378806010550178,0.754703705257725,0.889811221596536,2.05956061557231,0.302461847526478,1.5543720058278,0.443565449968902,1.11507737014592,3.59842489730884,0.931577741257556,2.48823724704513,1.59505028734797,0,0.751288044986092,0.380805212168795,2.44122439922797,2.18218391043071,0.214821114084977,9.74470895744837,0,0,0.686791410365586,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0.358177682162975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,3.31329602045583,4.34588364271704,0,0,0.93061915699296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:11755328..11755345,- | |short_description=p@chr6:11755328..11755345,- | ||
}} | }} |
Latest revision as of 18:42, 30 July 2015
Short description: | p@chr6:11755328..11755345, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:11755328..11755345, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous preadipocyte | 1.47e-14 | 2 |
vein endothelial cell | 3.73e-11 | 6 |
Schwann cell | 1.22e-10 | 2 |
blood vessel endothelial cell | 1.60e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.60e-09 | 18 |
mesenchymal stem cell of adipose | 4.12e-08 | 8 |
uterine smooth muscle cell | 6.68e-08 | 1 |
cardiac mesenchymal cell | 6.71e-08 | 4 |
migratory trunk neural crest cell | 6.71e-08 | 4 |
endothelial cell of vascular tree | 4.37e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
female gonad | 3.62e-19 | 13 |
left ovary | 2.26e-16 | 4 |
right ovary | 1.49e-13 | 5 |
gonad | 1.13e-11 | 21 |
indifferent external genitalia | 1.13e-11 | 21 |
indifferent gonad | 1.13e-11 | 21 |
gonad primordium | 1.13e-11 | 21 |
external genitalia | 4.07e-11 | 22 |
blood vessel endothelium | 1.60e-09 | 18 |
endothelium | 1.60e-09 | 18 |
cardiovascular system endothelium | 1.60e-09 | 18 |
female reproductive organ | 1.80e-08 | 37 |
female reproductive system | 1.80e-08 | 37 |
simple squamous epithelium | 9.44e-08 | 22 |
vein | 1.37e-07 | 9 |
venous blood vessel | 1.37e-07 | 9 |
venous system | 1.37e-07 | 9 |
female organism | 1.46e-07 | 41 |
squamous epithelium | 8.58e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.48e-24 | 14 |
female reproductive organ cancer | 5.22e-12 | 27 |
reproductive organ cancer | 4.02e-11 | 29 |
organ system benign neoplasm | 1.05e-08 | 1 |
skin benign neoplasm | 1.05e-08 | 1 |
integumentary system benign neoplasm | 1.05e-08 | 1 |
dermis tumor | 1.05e-08 | 1 |
cutaneous fibrous histiocytoma | 1.05e-08 | 1 |