FFCP PHASE1:Hg19::chr5:54274654..54274657,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:54274654..54274657,-
|short_description=p@chr5:54274654..54274657,-
|description=CAGE_peak_at_chr5:54274654..54274657,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:54274654..54274657,- | |||
|coexpression_cluster_id=C1278 | |||
|description=CAGE_peak_at_chr5:54274654..54274657,- | |||
|id=chr5:54274654..54274657,- | |||
|ontology_enrichment_celltype=CL:0000222!4.03e-23!119;CL:0002139!7.26e-20!24;CL:0000359!3.78e-16!32;CL:0000680!2.11e-15!57;CL:0000056!2.11e-15!57;CL:0000355!2.11e-15!57;CL:0000071!5.75e-14!18;CL:0002546!5.75e-14!18;CL:0000187!2.65e-13!54;CL:0000192!3.98e-13!42;CL:0000514!3.98e-13!42;CL:0000115!1.78e-12!35;CL:0000183!9.28e-12!59;CL:0000393!1.76e-11!60;CL:0000211!1.76e-11!60;CL:1000413!2.87e-11!9;CL:0002078!1.25e-10!44;CL:0000220!1.36e-10!246;CL:0002321!2.02e-10!248;CL:0002595!7.62e-10!5;CL:0000213!8.08e-10!57;CL:0000215!8.08e-10!57;CL:0002539!1.22e-09!10;CL:0000055!7.53e-09!180;CL:0005020!1.36e-07!6;CL:0002138!1.36e-07!6;CL:0005022!1.36e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002595;2.02e-18;5!CL:1000413;2.59e-17;9!CL:0000359;2.92e-17;32!CL:0002139;6.81e-14;24!CL:0002573;9.28e-14;2!CL:0000192;4.32e-11;43!CL:0002539;4.76e-09;10!CL:0000071;9.30e-09;18!CL:0000115;1.53e-08;36!CL:0002544;2.41e-07;6!CL:0002138;3.35e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,2.08e-18,5;CL:0000359,4.69e-18,32;CL:1000413,1.85e-17,9;CL:0002139,5.54e-14,24;CL:0002573,8.44e-14,2;CL:0000222,3.37e-13,121;CL:0000192,3.40e-13,43;CL:0000514,3.40e-13,43;CL:0000187,4.19e-10,55;CL:0000680,1.57e-09,58;CL:0000056,1.57e-09,58;CL:0000355,1.57e-09,58;CL:0000115,3.53e-09,36;CL:0000393,5.17e-09,61;CL:0000211,5.17e-09,61;CL:0002539,5.62e-09,10;CL:0000071,7.90e-09,18;CL:0002546,7.90e-09,18;CL:0002544,2.16e-07,6;CL:0002078,2.99e-07,45;CL:0005020,3.25e-07,6;CL:0002138,3.25e-07,6;CL:0005022,3.25e-07,6;CL:0002321,4.01e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;4.32e-11;43!CL:0002546;9.30e-09;18!CL:0005022;3.35e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:201;1.03e-14;6!DOID:0060100;1.03e-14;6!DOID:0060085;9.04e-11;1!DOID:3165;9.04e-11;1!DOID:0060121;9.04e-11;1!DOID:2438;9.04e-11;1!DOID:4418;9.04e-11;1!DOID:3347;9.04e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:201,9.37e-15,6;DOID:0060100,9.37e-15,6;DOID:0060085,5.05e-11,1;DOID:3165,5.05e-11,1;DOID:0060121,5.05e-11,1;DOID:2438,5.05e-11,1;DOID:4418,5.05e-11,1;DOID:3347,9.97e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0000055!1.31e-30!69;UBERON:0001637!2.18e-29!42;UBERON:0003509!2.18e-29!42;UBERON:0004572!2.18e-29!42;UBERON:0002049!1.49e-27!79;UBERON:0007798!1.49e-27!79;UBERON:0001981!8.94e-27!60;UBERON:0007500!8.94e-27!60;UBERON:0004537!8.94e-27!60;UBERON:0006965!8.94e-27!60;UBERON:0004573!4.64e-23!33;UBERON:0004571!4.64e-23!33;UBERON:0004872!2.20e-21!84;UBERON:0004535!3.26e-21!110;UBERON:0001009!2.15e-20!113;UBERON:0000490!6.58e-16!138;UBERON:0003914!4.83e-15!118;UBERON:0001134!5.02e-14!61;UBERON:0002036!5.02e-14!61;UBERON:0003082!5.02e-14!61;UBERON:0001986!5.75e-14!18;UBERON:0004638!5.75e-14!18;UBERON:0004852!5.75e-14!18;UBERON:0006914!1.90e-13!25;UBERON:0002385!2.10e-13!63;UBERON:0001015!2.10e-13!63;UBERON:0000383!2.10e-13!63;UBERON:0000487!3.04e-13!22;UBERON:0004290!1.60e-11!70;UBERON:0000947!2.24e-11!21;UBERON:0010191!2.24e-11!21;UBERON:0003915!2.87e-11!9;UBERON:0004700!2.87e-11!9;UBERON:0001917!2.87e-11!9;UBERON:0000486!3.30e-11!82;UBERON:0003834!7.62e-10!5;UBERON:0001533!7.62e-10!5;UBERON:0004237!1.22e-09!10;UBERON:0004695!1.22e-09!10;UBERON:0002111!1.22e-09!10;UBERON:0004178!1.22e-09!10;UBERON:0000914!6.73e-09!83;UBERON:0002329!6.73e-09!83;UBERON:0003077!6.73e-09!83;UBERON:0003059!6.73e-09!83;UBERON:0007282!6.73e-09!83;UBERON:0009618!6.73e-09!83;UBERON:0007285!6.73e-09!83;UBERON:0004111!3.11e-08!241;UBERON:0000477!1.20e-07!286;UBERON:0000025!2.72e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.59e-25;42!UBERON:0003509;1.59e-25;42!UBERON:0004572;1.59e-25;42!UBERON:0004573;1.87e-25;33!UBERON:0004571;1.87e-25;33!UBERON:0003834;2.02e-18;5!UBERON:0001533;2.02e-18;5!UBERON:0003915;2.59e-17;9!UBERON:0004700;2.59e-17;9!UBERON:0001917;2.59e-17;9!UBERON:0000055;3.90e-14;65!UBERON:0003513;2.52e-13;7!UBERON:0002049;2.60e-13;75!UBERON:0007798;2.60e-13;75!UBERON:0000947;3.31e-11;21!UBERON:0010191;3.31e-11;21!UBERON:0007500;2.00e-10;56!UBERON:0001981;2.00e-10;56!UBERON:0004537;2.00e-10;56!UBERON:0003914;1.45e-09;74!UBERON:0004237;4.76e-09;10!UBERON:0004695;4.76e-09;10!UBERON:0002111;4.76e-09;10!UBERON:0004178;4.76e-09;10!UBERON:0004638;9.30e-09;18!UBERON:0001986;9.30e-09;18!UBERON:0004852;9.30e-09;18!UBERON:0000487;3.43e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,7.87e-31,42;UBERON:0003509,7.87e-31,42;UBERON:0004572,7.87e-31,42;UBERON:0004573,2.06e-27,33;UBERON:0004571,2.06e-27,33;UBERON:0000055,3.20e-25,68;UBERON:0002049,1.04e-21,78;UBERON:0007798,1.04e-21,78;UBERON:0007500,2.00e-21,59;UBERON:0001981,2.00e-21,59;UBERON:0004537,2.00e-21,59;UBERON:0006965,2.00e-21,59;UBERON:0003834,2.08e-18,5;UBERON:0001533,2.08e-18,5;UBERON:0003915,1.85e-17,9;UBERON:0004700,1.85e-17,9;UBERON:0001917,1.85e-17,9;UBERON:0004535,6.69e-15,109;UBERON:0004872,1.08e-14,83;UBERON:0001009,1.93e-14,112;UBERON:0003513,2.57e-13,7;UBERON:0000947,3.50e-11,21;UBERON:0010191,3.50e-11,21;UBERON:0003914,7.20e-10,117;UBERON:0004237,5.62e-09,10;UBERON:0004695,5.62e-09,10;UBERON:0002111,5.62e-09,10;UBERON:0004178,5.62e-09,10;UBERON:0001134,7.49e-09,62;UBERON:0002036,7.49e-09,62;UBERON:0003082,7.49e-09,62;UBERON:0004638,7.90e-09,18;UBERON:0001986,7.90e-09,18;UBERON:0004852,7.90e-09,18;UBERON:0000490,8.34e-09,148;UBERON:0002385,1.52e-08,64;UBERON:0001015,1.52e-08,64;UBERON:0000383,1.52e-08,64;UBERON:0002329,1.33e-07,71;UBERON:0003059,1.33e-07,71;UBERON:0007282,1.33e-07,71;UBERON:0004290,1.33e-07,71;UBERON:0009618,1.33e-07,71;UBERON:0003077,1.75e-07,72;UBERON:0007285,1.75e-07,72;UBERON:0007524,2.28e-07,73;UBERON:0000487,3.01e-07,22;UBERON:0007503,7.84e-07,78 | |||
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| ||
|short_description=p@chr5:54274654..54274657,- | |||
}} | }} |
Latest revision as of 15:15, 30 July 2015
Short description: | p@chr5:54274654..54274657, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:54274654..54274657, - |
Coexpression cluster: | C1278_Smooth_Endothelial_osteosarcoma_schwannoma_large_Renal_Lymphatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 2.08e-18 | 5 |
vascular associated smooth muscle cell | 4.69e-18 | 32 |
endothelial cell of artery | 1.85e-17 | 9 |
endothelial cell of vascular tree | 5.54e-14 | 24 |
Schwann cell | 8.44e-14 | 2 |
mesodermal cell | 3.37e-13 | 121 |
smooth muscle cell | 3.40e-13 | 43 |
smooth muscle myoblast | 3.40e-13 | 43 |
muscle cell | 4.19e-10 | 55 |
muscle precursor cell | 1.57e-09 | 58 |
myoblast | 1.57e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.57e-09 | 58 |
endothelial cell | 3.53e-09 | 36 |
electrically responsive cell | 5.17e-09 | 61 |
electrically active cell | 5.17e-09 | 61 |
aortic smooth muscle cell | 5.62e-09 | 10 |
blood vessel endothelial cell | 7.90e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.90e-09 | 18 |
aortic endothelial cell | 2.16e-07 | 6 |
meso-epithelial cell | 2.99e-07 | 45 |
lymphangioblast | 3.25e-07 | 6 |
endothelial cell of lymphatic vessel | 3.25e-07 | 6 |
vascular lymphangioblast | 3.25e-07 | 6 |
embryonic cell | 4.01e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
connective tissue cancer | 9.37e-15 | 6 |
musculoskeletal system cancer | 9.37e-15 | 6 |
organ system benign neoplasm | 5.05e-11 | 1 |
skin benign neoplasm | 5.05e-11 | 1 |
integumentary system benign neoplasm | 5.05e-11 | 1 |
dermis tumor | 5.05e-11 | 1 |
cutaneous fibrous histiocytoma | 5.05e-11 | 1 |
osteosarcoma | 9.97e-11 | 1 |