FFCP PHASE1:Hg19::chr5:52549443..52549447,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:52549443..52549447,-
|short_description=p@chr5:52549443..52549447,-
|description=CAGE_peak_at_chr5:52549443..52549447,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:52549443..52549447,- | |||
|description=CAGE_peak_at_chr5:52549443..52549447,- | |||
|id=chr5:52549443..52549447,- | |||
|ontology_enrichment_celltype=CL:0002368!7.81e-11!13;CL:0000012!1.07e-10!682;CL:0000548!2.64e-10!679;CL:0000004!2.64e-10!679;CL:0000255!2.64e-10!679;CL:0000066!1.59e-09!254;CL:0000076!1.76e-09!62;CL:0000063!4.41e-09!578;CL:0002076!7.96e-09!43;CL:0002159!2.23e-08!13;CL:0000003!4.59e-08!722;CL:0000144!3.38e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0002328;1.78e-19;3!CL:0002202;2.02e-17;9!CL:0002632;2.02e-17;9!CL:0002368;4.20e-17;13!CL:0000307;1.74e-09;3!CL:1001319;1.25e-07;1!CL:1000600;1.25e-07;1!CL:0002174;2.91e-07;1!CL:0000501;2.91e-07;1!CL:0002159;4.18e-07;14!CL:0000306;7.48e-07;4!CL:0002222;7.48e-07;4!CL:0002224;7.48e-07;4!CL:0002327;7.48e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002328,1.02e-19,3;CL:0002202,1.60e-17,9;CL:0002632,1.60e-17,9;CL:0002368,3.46e-17,13;CL:0000068,1.90e-09,3;CL:0000069,1.90e-09,3;CL:0000307,1.90e-09,3;CL:0000377,1.90e-09,3;CL:1001319,1.33e-07,1;CL:1000600,1.33e-07,1;CL:0000066,2.83e-07,253;CL:0002174,3.40e-07,1;CL:0000501,3.40e-07,1;CL:0002159,4.09e-07,14;CL:0002327,6.45e-07,4;CL:0000306,8.69e-07,4;CL:0002222,8.69e-07,4;CL:0002224,8.69e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000377;1.74e-09;3 | |||
|ontology_enrichment_disease=DOID:2394!2.79e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.70e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.69e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0003102!7.30e-10!95;UBERON:0002097!6.19e-09!40;UBERON:0002199!2.75e-08!45;UBERON:0002416!2.75e-08!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.78e-19;3!UBERON:0002031;1.78e-19;3!UBERON:0002185;6.69e-12;5!UBERON:0007196;2.31e-10;15!UBERON:0001558;2.31e-10;15!UBERON:0001003;6.63e-10;15!UBERON:0007376;6.63e-10;15!UBERON:0000485;1.24e-08;7!UBERON:0010371;1.61e-08;31!UBERON:0004645;1.25e-07;1!UBERON:0001282;1.25e-07;1!UBERON:0009842;1.25e-07;1!UBERON:0003704;1.25e-07;1!UBERON:0001171;1.25e-07;1!UBERON:0001256;1.25e-07;1!UBERON:0001172;1.25e-07;1!UBERON:0001259;1.25e-07;1!UBERON:0001911;7.48e-07;4!UBERON:0010077;7.48e-07;4!UBERON:0005389;7.48e-07;4!UBERON:0000484;7.48e-07;4!UBERON:0000965;7.48e-07;4!UBERON:0001803;7.48e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.02e-19,3;UBERON:0002031,1.02e-19,3;UBERON:0000076,4.49e-12,8;UBERON:0002185,4.81e-12,5;UBERON:0007196,2.01e-10,15;UBERON:0001558,2.01e-10,15;UBERON:0001003,7.45e-10,15;UBERON:0007376,7.45e-10,15;UBERON:0007383,7.45e-10,15;UBERON:0005085,1.40e-08,31;UBERON:0001282,1.25e-07,1;UBERON:0009842,1.25e-07,1;UBERON:0003704,1.25e-07,1;UBERON:0001171,1.25e-07,1;UBERON:0001172,1.25e-07,1;UBERON:0004645,1.33e-07,1;UBERON:0001256,1.33e-07,1;UBERON:0001259,1.33e-07,1;UBERON:0001911,6.45e-07,4;UBERON:0005333,6.45e-07,4;UBERON:0008425,6.45e-07,4;UBERON:0005311,6.45e-07,4;UBERON:0000485,6.96e-07,9;UBERON:0010077,8.69e-07,4;UBERON:0005389,8.69e-07,4;UBERON:0000484,8.69e-07,4;UBERON:0002546,8.69e-07,4;UBERON:0000965,8.69e-07,4;UBERON:0001803,8.69e-07,4;UBERON:0003073,8.69e-07,4;UBERON:0005426,8.69e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,2.75826367343678,2.71085326900425,2.9580320813343,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45718115317017,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,2.1185468930115,0.573673241497627,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.485618833104395,0.280901613404497,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0.113432183160021,0.89694817844431,0.213557388818567,0,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,0,0,1.26216887122057,0,0.161646056818812,0,0.10075209822764,0,0,0.818238361772504,0.860413786167011,0,0,0,0,0,0,0,0,1.38134921352481,0.928735856063958,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09750285408626,4.49607013030478,0.804231779293047,0.648119116109707,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.283550194484773,1.34337784054272,1.74380363108377,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0.246381468041427,1.03850885836724,0.116210378459959,0,0.200506470303285,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,1.72279661398852,0,0,0,0,0,0,0,0,0,0,0.661139661443912,0.768760269460425,9.57095343709381,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0.636406495851874,0.78494864019923,0,0.54907405947211,0,0,0,0.421258456238981,0.48763373908959,0,2.11300293513511,0,0,0,0,0,0,0,0,0.405820753925408,0,0.281695602532241,0,0,0,0,0,0,0,0,2.4055528181378,0,4.3556393944529,0,0.43050537267123,0,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.890469640183247,0,0,0,0,0,0,0,0,0.449341755736634,0,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62066728448103,0,0,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0.75901493089674,1.43042921082341,0,0,0,0,0,0,0,1.48260564340311,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,3.04707223031409,0,0,0,0.0730893170861856,0,0,0,0,0.685209623233754,0,0,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0.124252535565433,0,0.407712618220842,0.523014231561666,0.407992870545287,0,0,0,0,1.28929632425987,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68681276247223,0,0,0,0,0,0,1.19730191562487,0.82092520749339,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0.74988244777264,1.21319294033318,0,0,0,0,0.597019211547496,0.233713309847224,0,0,0,0,0.228840068396924,0.151230923763239,0.466311601748341,0.147855149989634,0.477890301491107,0,0.310525913752519,0,0.53168342911599,1.5652351854352,0.751288044986092,0,0.813741466409323,0.727394636810238,0.859284456339908,0,0.398095888698616,1.20008329398946,0,0.336749488765919,0,0,0.857766365499703,0.260994291965212,0.680117776536817,0.231522474323834,0,0.71635536432595,0,0,0,0.38582807654183,0.168942440653073,0,0.690860683462397,0.303859956177382,0,0,0,0,0.982829546539238,0.245772908753719,0,0.19998739585493,0,0,0,0.184105950251841,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0.917142992608395,3.00366731990879,0.381382095467167,0,0,0,0,0,0,0.49131575253029,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0.236387681767936,0.556157009460346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76447435857846,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.1488789154827,0,0,0,0,0,0,0,2.52350132694021,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,2.75826367343678,2.71085326900425,2.9580320813343,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45718115317017,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,2.1185468930115,0.573673241497627,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.485618833104395,0.280901613404497,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0.113432183160021,0.89694817844431,0.213557388818567,0,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,0,0,1.26216887122057,0,0.161646056818812,0,0.10075209822764,0,0,0.818238361772504,0.860413786167011,0,0,0,0,0,0,0,0,1.38134921352481,0.928735856063958,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09750285408626,4.49607013030478,0.804231779293047,0.648119116109707,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.283550194484773,1.34337784054272,1.74380363108377,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0.246381468041427,1.03850885836724,0.116210378459959,0,0.200506470303285,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,1.72279661398852,0,0,0,0,0,0,0,0,0,0,0.661139661443912,0.768760269460425,9.57095343709381,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0.636406495851874,0.78494864019923,0,0.54907405947211,0,0,0,0.421258456238981,0.48763373908959,0,2.11300293513511,0,0,0,0,0,0,0,0,0.405820753925408,0,0.281695602532241,0,0,0,0,0,0,0,0,2.4055528181378,0,4.3556393944529,0,0.43050537267123,0,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.890469640183247,0,0,0,0,0,0,0,0,0.449341755736634,0,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62066728448103,0,0,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0.75901493089674,1.43042921082341,0,0,0,0,0,0,0,1.48260564340311,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,3.04707223031409,0,0,0,0.0730893170861856,0,0,0,0,0.685209623233754,0,0,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0.124252535565433,0,0.407712618220842,0.523014231561666,0.407992870545287,0,0,0,0,1.28929632425987,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68681276247223,0,0,0,0,0,0,1.19730191562487,0.82092520749339,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0.74988244777264,1.21319294033318,0,0,0,0,0.597019211547496,0.233713309847224,0,0,0,0,0.228840068396924,0.151230923763239,0.466311601748341,0.147855149989634,0.477890301491107,0,0.310525913752519,0,0.53168342911599,1.5652351854352,0.751288044986092,0,0.813741466409323,0.727394636810238,0.859284456339908,0,0.398095888698616,1.20008329398946,0,0.336749488765919,0,0,0.857766365499703,0.260994291965212,0.680117776536817,0.231522474323834,0,0.71635536432595,0,0,0,0.38582807654183,0.168942440653073,0,0.690860683462397,0.303859956177382,0,0,0,0,0.982829546539238,0.245772908753719,0,0.19998739585493,0,0,0,0.184105950251841,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0.917142992608395,3.00366731990879,0.381382095467167,0,0,0,0,0,0,0.49131575253029,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0.236387681767936,0.556157009460346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76447435857846,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.1488789154827,0,0,0,0,0,0,0,2.52350132694021,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:52549443..52549447,- | |||
}} | }} |
Latest revision as of 15:10, 30 July 2015
Short description: | p@chr5:52549443..52549447, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:52549443..52549447, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial epithelial cell | 1.02e-19 | 3 |
epithelial cell of tracheobronchial tree | 1.60e-17 | 9 |
epithelial cell of lower respiratory tract | 1.60e-17 | 9 |
respiratory epithelial cell | 3.46e-17 | 13 |
duct epithelial cell | 1.90e-09 | 3 |
branched duct epithelial cell | 1.90e-09 | 3 |
tracheal epithelial cell | 1.90e-09 | 3 |
tracheoblast | 1.90e-09 | 3 |
bladder cell | 1.33e-07 | 1 |
lower urinary tract cell | 1.33e-07 | 1 |
epithelial cell | 2.83e-07 | 253 |
follicular cell of ovary | 3.40e-07 | 1 |
granulosa cell | 3.40e-07 | 1 |
general ecto-epithelial cell | 4.09e-07 | 14 |
mammary gland epithelial cell | 6.45e-07 | 4 |
crystallin accumulating cell | 8.69e-07 | 4 |
vertebrate lens cell | 8.69e-07 | 4 |
lens epithelial cell | 8.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.02e-19 | 3 |
epithelium of bronchus | 1.02e-19 | 3 |
external ectoderm | 4.49e-12 | 8 |
bronchus | 4.81e-12 | 5 |
tracheobronchial tree | 2.01e-10 | 15 |
lower respiratory tract | 2.01e-10 | 15 |
skin epidermis | 7.45e-10 | 15 |
outer epithelium | 7.45e-10 | 15 |
enveloping layer of ectoderm | 7.45e-10 | 15 |
ectodermal placode | 1.40e-08 | 31 |
intralobular bile duct | 1.25e-07 | 1 |
acinus | 1.25e-07 | 1 |
intrahepatic bile duct | 1.25e-07 | 1 |
portal lobule | 1.25e-07 | 1 |
hepatic acinus | 1.25e-07 | 1 |
urinary bladder urothelium | 1.33e-07 | 1 |
wall of urinary bladder | 1.33e-07 | 1 |
mucosa of urinary bladder | 1.33e-07 | 1 |
mammary gland | 6.45e-07 | 4 |
mammary bud | 6.45e-07 | 4 |
mammary ridge | 6.45e-07 | 4 |
mammary placode | 6.45e-07 | 4 |
simple columnar epithelium | 6.96e-07 | 9 |
cuboidal epithelium | 8.69e-07 | 4 |
transparent eye structure | 8.69e-07 | 4 |
simple cuboidal epithelium | 8.69e-07 | 4 |
cranial placode | 8.69e-07 | 4 |
lens of camera-type eye | 8.69e-07 | 4 |
epithelium of lens | 8.69e-07 | 4 |
lens placode | 8.69e-07 | 4 |
lens vesicle | 8.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.69e-11 | 14 |