FFCP PHASE1:Hg19::chr5:32829061..32829092,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:32829061..32829092,+ | |||
|description=CAGE_peak_at_chr5:32829061..32829092,+ | |description=CAGE_peak_at_chr5:32829061..32829092,+ | ||
|id=chr5:32829061..32829092,+ | |id=chr5:32829061..32829092,+ | ||
|ontology_enrichment_celltype=CL:0000153!4.85e-18!9;CL:0000447!4.85e-18!9;CL:0000667!8.70e-18!6;CL:0000058!8.70e-18!6;CL:0000138!8.70e-18!6;CL:0000327!4.00e-16!14;CL:0000515!1.85e-15!4;CL:0002617!5.52e-14!2;CL:0000499!6.36e-11!27;CL:0000151!3.34e-08!35;CL:0000055!1.28e-07!180 | |ontology_enrichment_celltype=CL:0000153!4.85e-18!9;CL:0000447!4.85e-18!9;CL:0000667!8.70e-18!6;CL:0000058!8.70e-18!6;CL:0000138!8.70e-18!6;CL:0000327!4.00e-16!14;CL:0000515!1.85e-15!4;CL:0002617!5.52e-14!2;CL:0000499!6.36e-11!27;CL:0000151!3.34e-08!35;CL:0000055!1.28e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000515;2.17e-54;3!CL:0000056;5.02e-41;4!CL:0002617;2.45e-36;2!CL:0000138;5.65e-28;6!CL:0000680;8.36e-24;7!CL:0000153;6.60e-19;9!CL:0000447;6.60e-19;9!CL:0000327;1.30e-11;15!CL:0002321;1.76e-11;15!CL:0000499;8.63e-11;28!CL:0000054;3.13e-10;2!CL:0000137;3.13e-10;2!CL:0000092;3.13e-10;2!CL:0000151;1.23e-07;36!CL:0000135;2.12e-07;3!CL:0000388;2.12e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,5.02e-41,4;CL:0002617,2.93e-36,2;CL:0000058,5.91e-28,6;CL:0000138,5.91e-28,6;CL:0000153,6.80e-19,9;CL:0000447,6.80e-19,9;CL:0000327,1.32e-11,15;CL:0000499,8.85e-11,28;CL:0000054,2.72e-10,2;CL:0000137,2.72e-10,2;CL:0000092,2.72e-10,2;CL:0000151,2.05e-08,36;CL:0000135,2.19e-07,3;CL:0000388,2.19e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000515;5.02e-41;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:200;3.13e-10;2!DOID:4305;3.13e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:200,2.72e-10,2;DOID:4305,2.72e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0007195!5.96e-08!1;UBERON:0002363!3.17e-07!1;UBERON:0007647!3.17e-07!1;UBERON:0010115!3.17e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;2.47e-19;1!UBERON:0001134;8.39e-11;16!UBERON:0002036;8.39e-11;16!UBERON:0000310;4.50e-08;10!UBERON:0001443;2.03e-07;11!UBERON:0007846;2.12e-07;3!UBERON:0000043;2.12e-07;3!UBERON:0007845;2.12e-07;3!UBERON:0002371;6.54e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,2.25e-19,1;UBERON:0000310,4.66e-08,10;UBERON:0001443,2.10e-07,11;UBERON:0007846,2.19e-07,3;UBERON:0000043,2.19e-07,3;UBERON:0007845,2.19e-07,3 | |||
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|short_description=p@chr5:32829061..32829092,+ | |short_description=p@chr5:32829061..32829092,+ | ||
}} | }} |
Latest revision as of 14:23, 30 July 2015
Short description: | p@chr5:32829061..32829092, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:32829061..32829092, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 5.02e-41 | 4 |
adipocyte of breast | 2.93e-36 | 2 |
chondroblast | 5.91e-28 | 6 |
chondrocyte | 5.91e-28 | 6 |
GAG secreting cell | 6.80e-19 | 9 |
carbohydrate secreting cell | 6.80e-19 | 9 |
extracellular matrix secreting cell | 1.32e-11 | 15 |
stromal cell | 8.85e-11 | 28 |
bone matrix secreting cell | 2.72e-10 | 2 |
osteocyte | 2.72e-10 | 2 |
osteoclast | 2.72e-10 | 2 |
secretory cell | 2.05e-08 | 36 |
fibrocyte | 2.19e-07 | 3 |
tendon cell | 2.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 2.25e-19 | 1 |
breast | 4.66e-08 | 10 |
chest | 2.10e-07 | 11 |
dense regular connective tissue | 2.19e-07 | 3 |
tendon | 2.19e-07 | 3 |
regular connective tissue | 2.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
giant cell tumor | 2.72e-10 | 2 |
bone giant cell tumor | 2.72e-10 | 2 |