FFCP PHASE1:Hg19::chr5:170179543..170179549,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:170179543..170179549,+ | |||
|coexpression_cluster_id=C556 | |||
|description=CAGE_peak_at_chr5:170179543..170179549,+ | |description=CAGE_peak_at_chr5:170179543..170179549,+ | ||
|id=chr5:170179543..170179549,+ | |id=chr5:170179543..170179549,+ | ||
|ontology_enrichment_celltype=CL:0000349!7.19e-15!3;CL:0002577!7.19e-15!3;CL:0002536!1.21e-10!2 | |ontology_enrichment_celltype=CL:0000349!7.19e-15!3;CL:0002577!7.19e-15!3;CL:0002536!1.21e-10!2 | ||
|ontology_enrichment_celltype_v019=CL:0002536;9.40e-14;2!CL:0000349;1.64e-12;19!CL:0002577;1.19e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002536,9.40e-14,2;CL:0000349,1.64e-12,19;CL:0002577,1.19e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!9.03e-12!14;UBERON:0000158!9.03e-12!14;UBERON:0001987!2.87e-11!4;UBERON:0004340!2.87e-11!4;UBERON:0003127!2.32e-10!2;UBERON:0000007!4.23e-10!2;UBERON:0006562!8.88e-10!11;UBERON:0004119!1.24e-08!169;UBERON:0000925!1.24e-08!169;UBERON:0006595!1.24e-08!169;UBERON:0004175!3.69e-08!25;UBERON:0000077!4.49e-08!130;UBERON:0007023!2.24e-07!115;UBERON:0000974!3.23e-07!10;UBERON:0002110!4.17e-07!3;UBERON:0006242!4.17e-07!3;UBERON:0006947!4.86e-07!3;UBERON:0004054!4.86e-07!3;UBERON:0001042!5.88e-07!10;UBERON:0009145!5.88e-07!10;UBERON:0001007!7.40e-07!155;UBERON:0001555!7.40e-07!155;UBERON:0007026!7.40e-07!155;UBERON:0000305!9.32e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;3.06e-15;7!UBERON:0006562;6.43e-14;2!UBERON:0003127;1.29e-13;2!UBERON:0000341;1.29e-13;2!UBERON:0005631;5.69e-11;10!UBERON:0000158;5.69e-11;10!UBERON:0000478;4.77e-10;24!UBERON:0001987;1.49e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.02e-16,14;UBERON:0000158,1.02e-16,14;UBERON:0000305,3.06e-15,7;UBERON:0003127,1.37e-13,2;UBERON:0000341,1.55e-13,2;UBERON:0004871,1.83e-13,8;UBERON:0000478,4.77e-10,24;UBERON:0001987,1.49e-07,4;UBERON:0004340,1.49e-07,4 | |||
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|short_description=p@chr5:170179543..170179549,+ | |short_description=p@chr5:170179543..170179549,+ | ||
}} | }} |
Latest revision as of 12:59, 30 July 2015
Short description: | p@chr5:170179543..170179549, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:170179543..170179549, + |
Coexpression cluster: | C556_pharyngeal_Gingival_Retinal_lung_Mallassezderived_Small_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amniotic epithelial cell | 9.40e-14 | 2 |
extraembryonic cell | 1.64e-12 | 19 |
placental epithelial cell | 1.19e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.02e-16 | 14 |
membranous layer | 1.02e-16 | 14 |
amnion | 3.06e-15 | 7 |
open tracheal system trachea | 1.37e-13 | 2 |
throat | 1.55e-13 | 2 |
somatic layer of lateral plate mesoderm | 1.83e-13 | 8 |
extraembryonic structure | 4.77e-10 | 24 |
placenta | 1.49e-07 | 4 |
allantois | 1.49e-07 | 4 |