FFCP PHASE1:Hg19::chr5:167689880..167689926,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:167689880..167689926,+ | |||
|coexpression_cluster_id=C1956 | |coexpression_cluster_id=C1956 | ||
|description=CAGE_peak_at_chr5:167689880..167689926,+ | |description=CAGE_peak_at_chr5:167689880..167689926,+ | ||
|id=chr5:167689880..167689926,+ | |id=chr5:167689880..167689926,+ | ||
|ontology_enrichment_celltype=CL:0002159!1.52e-07!13;CL:0002076!4.79e-07!43 | |ontology_enrichment_celltype=CL:0002159!1.52e-07!13;CL:0002076!4.79e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0002159;1.67e-11;14!CL:0002620;8.09e-11;23!CL:0000362;2.30e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,1.74e-11,14;CL:0002620,9.76e-11,23;CL:0000221,6.83e-08,72;CL:0000362,2.44e-07,9;CL:0002077,3.31e-07,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;8.88e-09;5!DOID:450;8.88e-09;5!DOID:66;8.88e-09;5!DOID:423;8.88e-09;5!DOID:0080000;8.88e-09;5!DOID:11722;8.88e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,8.68e-09,5;DOID:450,8.68e-09,5;DOID:66,8.68e-09,5;DOID:423,8.68e-09,5;DOID:0080000,8.68e-09,5;DOID:11722,8.68e-09,5 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;3.85e-20;22!UBERON:0001950;5.42e-18;20!UBERON:0000956;4.26e-17;25!UBERON:0000203;4.26e-17;25!UBERON:0001869;1.10e-13;32!UBERON:0002791;1.15e-13;32!UBERON:0003528;1.75e-13;34!UBERON:0002020;1.75e-13;34!UBERON:0002097;2.98e-13;41!UBERON:0001893;1.97e-12;34!UBERON:0002780;3.77e-10;41!UBERON:0001890;3.77e-10;41!UBERON:0002199;5.02e-10;46!UBERON:0002416;5.02e-10;46!UBERON:0003102;7.76e-10;50!UBERON:0010371;8.98e-10;31!UBERON:0000073;2.30e-08;53!UBERON:0002616;2.30e-08;53!UBERON:0001003;9.16e-08;15!UBERON:0007376;9.16e-08;15!UBERON:0000955;3.24e-07;68!UBERON:0001872;9.89e-07;5 | |||
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| ||
|short_description=p@chr5:167689880..167689926,+ | |short_description=p@chr5:167689880..167689926,+ | ||
}} | }} |
Latest revision as of 12:46, 30 July 2015
Short description: | p@chr5:167689880..167689926, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:167689880..167689926, + |
Coexpression cluster: | C1956_Fibroblast_mesothelioma_Mesothelial_pineal_Mallassezderived_mesenchymal_osteoclastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 1.74e-11 | 14 |
skin fibroblast | 9.76e-11 | 23 |
ectodermal cell | 6.83e-08 | 72 |
epidermal cell | 2.44e-07 | 9 |
ecto-epithelial cell | 3.31e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.68e-09 | 5 |
myotonic disease | 8.68e-09 | 5 |
muscle tissue disease | 8.68e-09 | 5 |
myopathy | 8.68e-09 | 5 |
muscular disease | 8.68e-09 | 5 |
myotonic dystrophy | 8.68e-09 | 5 |