FFCP PHASE1:Hg19::chr5:153673183..153673186,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:153673183..153673186,+ | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_at_chr5:153673183..153673186,+ | |description=CAGE_peak_at_chr5:153673183..153673186,+ | ||
|id=chr5:153673183..153673186,+ | |id=chr5:153673183..153673186,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000054;7.14e-26;2!CL:0000137;7.14e-26;2!CL:0000092;7.14e-26;2!CL:0000214;9.45e-18;3!CL:0000153;8.37e-07;9!CL:0000447;8.37e-07;9!CL:0000062;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,5.56e-26,2;CL:0000137,5.56e-26,2;CL:0000092,5.56e-26,2;CL:0000062,5.63e-19,11;CL:0000375,5.63e-19,11;CL:0000335,5.63e-19,11;CL:0000214,9.46e-18,3;CL:0000153,8.37e-07,9;CL:0000447,8.37e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000335;5.63e-19;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:200;7.14e-26;2!DOID:4305;7.14e-26;2!DOID:201;1.44e-09;6!DOID:0060100;1.44e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:200,5.56e-26,2;DOID:4305,5.56e-26,2;DOID:201,1.32e-09,6;DOID:0060100,1.32e-09,6 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0006915;9.45e-18;3!UBERON:0007616;9.45e-18;3!UBERON:0002217;9.45e-18;3!UBERON:0002018;9.45e-18;3!UBERON:0004905;1.69e-07;8!UBERON:0000982;1.69e-07;8!UBERON:0004770;1.69e-07;8!UBERON:0004457;8.37e-07;9!UBERON:0000042;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,9.46e-18,3;UBERON:0007616,9.46e-18,3;UBERON:0002217,9.46e-18,3;UBERON:0002018,9.46e-18,3;UBERON:0004905,1.69e-07,8;UBERON:0000982,1.69e-07,8;UBERON:0004770,1.69e-07,8 | |||
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|short_description=p@chr5:153673183..153673186,+ | |short_description=p@chr5:153673183..153673186,+ | ||
}} | }} |
Latest revision as of 12:09, 30 July 2015
Short description: | p@chr5:153673183..153673186, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:153673183..153673186, + |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 5.56e-26 | 2 |
osteocyte | 5.56e-26 | 2 |
osteoclast | 5.56e-26 | 2 |
osteoblast | 5.63e-19 | 11 |
osteoprogenitor cell | 5.63e-19 | 11 |
mesenchyme condensation cell | 5.63e-19 | 11 |
synovial cell | 9.46e-18 | 3 |
GAG secreting cell | 8.37e-07 | 9 |
carbohydrate secreting cell | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 9.46e-18 | 3 |
layer of synovial tissue | 9.46e-18 | 3 |
synovial joint | 9.46e-18 | 3 |
synovial membrane of synovial joint | 9.46e-18 | 3 |
articulation | 1.69e-07 | 8 |
skeletal joint | 1.69e-07 | 8 |
articular system | 1.69e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
giant cell tumor | 5.56e-26 | 2 |
bone giant cell tumor | 5.56e-26 | 2 |
connective tissue cancer | 1.32e-09 | 6 |
musculoskeletal system cancer | 1.32e-09 | 6 |