FFCP PHASE1:Hg19::chr5:147470611..147470637,+: Difference between revisions
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|id=chr5:147470611..147470637,+
|short_description=p@chr5:147470611..147470637,+
|description=CAGE_peak_at_chr5:147470611..147470637,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:147470611..147470637,+ | |||
|coexpression_cluster_id=C2811 | |||
|description=CAGE_peak_at_chr5:147470611..147470637,+ | |||
|id=chr5:147470611..147470637,+ | |||
|ontology_enrichment_celltype=CL:0002076!3.22e-12!43;CL:0002150!3.69e-11!3;CL:0000861!3.69e-11!3;CL:0000066!1.17e-10!254;CL:0002368!1.37e-10!13;CL:0002618!2.53e-10!3;CL:0000223!2.40e-09!59;CL:0001014!1.37e-07!2;CL:0001016!1.37e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002623;7.02e-25;3!CL:0000622;2.34e-15;5!CL:0000154;5.76e-13;6!CL:0001014;2.99e-10;2!CL:0001016;2.99e-10;2!CL:0000150;5.87e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,8.95e-25,3;CL:0000622,2.70e-15,5;CL:0000154,6.50e-13,6;CL:0001014,2.99e-10,2;CL:0001016,2.99e-10,2;CL:0000150,6.36e-09,9 | |||
|ontology_enrichment_development_v019=UBERON:0009143;3.91e-19;1!UBERON:0008814;2.99e-10;2!UBERON:0010056;2.99e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;2.02e-15;5!DOID:4074;1.43e-10;2!DOID:4905;1.43e-10;2!DOID:3498;1.43e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,2.34e-15,5;DOID:4074,1.43e-10,2;DOID:4905,1.43e-10,2;DOID:3498,1.43e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.95e-09!72;UBERON:0004119!1.68e-08!169;UBERON:0000925!1.68e-08!169;UBERON:0006595!1.68e-08!169;UBERON:0000065!3.60e-08!53;UBERON:0001007!1.93e-07!155;UBERON:0001555!1.93e-07!155;UBERON:0007026!1.93e-07!155;UBERON:0000464!6.68e-07!104;UBERON:0000161!6.80e-07!35;UBERON:0000341!8.03e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000002;5.10e-13;6!UBERON:0001560;5.10e-13;6!UBERON:0001044;5.76e-13;6!UBERON:0003293;5.76e-13;6!UBERON:0003294;5.76e-13;6!UBERON:0010047;5.76e-13;6!UBERON:0003408;5.76e-13;6!UBERON:0000167;5.76e-13;6!UBERON:0001041;3.58e-12;14!UBERON:0001043;2.97e-07;3!UBERON:0001723;2.97e-07;3!UBERON:0001033;2.97e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,5.76e-13,6;UBERON:0001560,5.76e-13,6;UBERON:0001044,6.50e-13,6;UBERON:0003293,6.50e-13,6;UBERON:0003294,6.50e-13,6;UBERON:0010047,6.50e-13,6;UBERON:0000167,6.50e-13,6;UBERON:0003408,4.04e-08,10;UBERON:0000166,5.79e-08,22;UBERON:0001723,2.63e-07,3;UBERON:0001033,2.63e-07,3;UBERON:0010056,2.63e-07,3;UBERON:0001043,2.79e-07,3;UBERON:0009143,2.79e-07,3 | |||
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| ||
|short_description=p@chr5:147470611..147470637,+ | |||
}} | }} |
Latest revision as of 11:15, 30 July 2015
Short description: | p@chr5:147470611..147470637, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:147470611..147470637, + |
Coexpression cluster: | C2811_cervical_epitheloid_ductal_tongue_esophagus_immature_salivary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 8.95e-25 | 3 |
acinar cell | 2.70e-15 | 5 |
protein secreting cell | 6.50e-13 | 6 |
CD1a-positive Langerhans cell | 2.99e-10 | 2 |
immature CD1a-positive Langerhans cell | 2.99e-10 | 2 |
glandular epithelial cell | 6.36e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
uterine cervix | 5.76e-13 | 6 |
neck of organ | 5.76e-13 | 6 |
saliva-secreting gland | 6.50e-13 | 6 |
gland of oral region | 6.50e-13 | 6 |
gland of foregut | 6.50e-13 | 6 |
oral gland | 6.50e-13 | 6 |
oral cavity | 6.50e-13 | 6 |
gland of gut | 4.04e-08 | 10 |
oral opening | 5.79e-08 | 22 |
tongue | 2.63e-07 | 3 |
gustatory system | 2.63e-07 | 3 |
future tongue | 2.63e-07 | 3 |
esophagus | 2.79e-07 | 3 |
esophageal region | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 2.34e-15 | 5 |
pancreas adenocarcinoma | 1.43e-10 | 2 |
pancreatic carcinoma | 1.43e-10 | 2 |
pancreatic ductal adenocarcinoma | 1.43e-10 | 2 |