FFCP PHASE1:Hg19::chr5:135378786..135378804,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:135378786..135378804,+ | |||
|coexpression_cluster_id=C598 | |||
|description=CAGE_peak_at_chr5:135378786..135378804,+ | |description=CAGE_peak_at_chr5:135378786..135378804,+ | ||
|id=chr5:135378786..135378804,+ | |id=chr5:135378786..135378804,+ | ||
|ontology_enrichment_celltype=CL:0000071!1.33e-10!18;CL:0002546!1.33e-10!18;CL:0000064!1.63e-10!3;CL:0005012!1.63e-10!3;CL:0000067!1.63e-10!3;CL:0002304!1.63e-10!3;CL:0000054!2.51e-08!2;CL:0000137!2.51e-08!2;CL:0000092!2.51e-08!2;CL:0002139!1.32e-07!24;CL:0000062!1.69e-07!11;CL:0000375!1.69e-07!11;CL:0000335!1.69e-07!11 | |ontology_enrichment_celltype=CL:0000071!1.33e-10!18;CL:0002546!1.33e-10!18;CL:0000064!1.63e-10!3;CL:0005012!1.63e-10!3;CL:0000067!1.63e-10!3;CL:0002304!1.63e-10!3;CL:0000054!2.51e-08!2;CL:0000137!2.51e-08!2;CL:0000092!2.51e-08!2;CL:0002139!1.32e-07!24;CL:0000062!1.69e-07!11;CL:0000375!1.69e-07!11;CL:0000335!1.69e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000054;1.33e-15;2!CL:0000137;1.33e-15;2!CL:0000092;1.33e-15;2!CL:0000306;2.52e-08;4!CL:0002222;2.52e-08;4!CL:0002224;2.52e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,1.33e-15,2;CL:0000137,1.33e-15,2;CL:0000092,1.33e-15,2;CL:0000306,2.43e-08,4;CL:0002222,2.43e-08,4;CL:0002224,2.43e-08,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:200!2.51e-08!2;DOID:4305!2.51e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:200;1.33e-15;2!DOID:4305;1.33e-15;2!DOID:1115;1.81e-13;20!DOID:5409;2.11e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:200,1.33e-15,2;DOID:4305,1.33e-15,2;DOID:1115,1.92e-13,20;DOID:5409,2.11e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0000487!1.24e-10!22;UBERON:0001986!1.33e-10!18;UBERON:0004638!1.33e-10!18;UBERON:0004852!1.33e-10!18;UBERON:0001778!1.63e-10!3;UBERON:0001775!1.63e-10!3;UBERON:0006914!3.77e-09!25;UBERON:0000488!5.53e-08!4;UBERON:0007625!2.99e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;2.52e-08;4!UBERON:0005389;2.52e-08;4!UBERON:0000484;2.52e-08;4!UBERON:0000965;2.52e-08;4!UBERON:0001803;2.52e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,2.43e-08,4;UBERON:0005389,2.43e-08,4;UBERON:0000484,2.43e-08,4;UBERON:0002546,2.43e-08,4;UBERON:0000965,2.43e-08,4;UBERON:0001803,2.43e-08,4;UBERON:0003073,2.43e-08,4;UBERON:0005426,2.43e-08,4 | |||
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| ||
|short_description=p@chr5:135378786..135378804,+ | |short_description=p@chr5:135378786..135378804,+ | ||
}} | }} |
Latest revision as of 10:01, 30 July 2015
Short description: | p@chr5:135378786..135378804, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:135378786..135378804, + |
Coexpression cluster: | C598_fibrosarcoma_osteoclastoma_fibrous_astrocytoma_large_liposarcoma_embryonic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 1.33e-15 | 2 |
osteocyte | 1.33e-15 | 2 |
osteoclast | 1.33e-15 | 2 |
crystallin accumulating cell | 2.43e-08 | 4 |
vertebrate lens cell | 2.43e-08 | 4 |
lens epithelial cell | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 2.43e-08 | 4 |
transparent eye structure | 2.43e-08 | 4 |
simple cuboidal epithelium | 2.43e-08 | 4 |
cranial placode | 2.43e-08 | 4 |
lens of camera-type eye | 2.43e-08 | 4 |
epithelium of lens | 2.43e-08 | 4 |
lens placode | 2.43e-08 | 4 |
lens vesicle | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
giant cell tumor | 1.33e-15 | 2 |
bone giant cell tumor | 1.33e-15 | 2 |
sarcoma | 1.92e-13 | 20 |
lung small cell carcinoma | 2.11e-08 | 4 |