FFCP PHASE1:Hg19::chr5:121406259..121406287,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:121406259..121406287,-
|short_description=p@chr5:121406259..121406287,-
|description=CAGE_peak_at_chr5:121406259..121406287,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:121406259..121406287,- | |||
|coexpression_cluster_id=C421 | |||
|description=CAGE_peak_at_chr5:121406259..121406287,- | |||
|id=chr5:121406259..121406287,- | |||
|ontology_enrichment_celltype=CL:0000055!2.19e-30!180;CL:0000057!3.40e-23!75;CL:0002620!1.61e-12!23;CL:0000680!1.18e-10!57;CL:0000056!1.18e-10!57;CL:0000355!1.18e-10!57;CL:0000222!1.87e-10!119;CL:0000048!2.69e-10!430;CL:0000192!3.12e-10!42;CL:0000514!3.12e-10!42;CL:0000187!3.23e-10!54;CL:0000393!6.06e-10!60;CL:0000211!6.06e-10!60;CL:0000723!1.37e-09!436;CL:0000144!2.86e-09!625;CL:0002334!3.10e-09!12;CL:0000034!5.41e-09!444;CL:0000183!1.97e-08!59;CL:0002371!1.23e-07!591;CL:0000359!8.11e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.48e-17;12!CL:0002620;4.96e-11;23!CL:0000057;5.30e-09;73!CL:0000499;1.59e-08;28!CL:1000306;8.10e-08;4!CL:0002547;8.10e-08;4!CL:0000135;1.86e-07;3!CL:0000388;1.86e-07;3!CL:0002579;3.73e-07;3!CL:0002580;6.59e-07;3!CL:0000153;6.85e-07;9!CL:0000447;6.85e-07;9!CL:0000136;6.92e-07;13!CL:0002615;9.94e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.23e-27,76;CL:0002334,2.37e-17,12;CL:0002620,4.06e-11,23;CL:0000134,3.36e-10,354;CL:0000048,9.82e-10,427;CL:0002320,1.16e-09,361;CL:0000723,2.51e-09,433;CL:0000136,3.14e-09,15;CL:0000034,8.34e-09,441;CL:0000219,9.38e-09,386;CL:0000499,1.30e-08,28;CL:1000306,3.83e-08,4;CL:0002547,3.83e-08,4;CL:0000135,1.88e-07,3;CL:0000388,1.88e-07,3;CL:0002579,3.46e-07,3;CL:0000153,6.14e-07,9;CL:0000447,6.14e-07,9;CL:0002580,6.82e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.15e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:17;3.14e-09;5!DOID:450;3.14e-09;5!DOID:66;3.14e-09;5!DOID:423;3.14e-09;5!DOID:0080000;3.14e-09;5!DOID:11722;3.14e-09;5!DOID:2394;4.17e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.90e-09,5;DOID:450,1.90e-09,5;DOID:66,1.90e-09,5;DOID:423,1.90e-09,5;DOID:0080000,1.90e-09,5;DOID:11722,1.90e-09,5;DOID:2394,4.44e-08,14;DOID:0060084,9.33e-07,3;DOID:127,9.33e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0004290!6.25e-10!70;UBERON:0001134!9.60e-10!61;UBERON:0002036!9.60e-10!61;UBERON:0003082!9.60e-10!61;UBERON:0002385!1.38e-09!63;UBERON:0001015!1.38e-09!63;UBERON:0000383!1.38e-09!63;UBERON:0000914!6.75e-09!83;UBERON:0002329!6.75e-09!83;UBERON:0003077!6.75e-09!83;UBERON:0003059!6.75e-09!83;UBERON:0007282!6.75e-09!83;UBERON:0009618!6.75e-09!83;UBERON:0007285!6.75e-09!83;UBERON:0000486!1.45e-08!82;UBERON:0004872!8.09e-08!84;UBERON:0002049!8.84e-08!79;UBERON:0007798!8.84e-08!79;UBERON:0002199!1.67e-07!45;UBERON:0002416!1.67e-07!45;UBERON:0004535!4.26e-07!110;UBERON:0003688!6.35e-07!6;UBERON:0002358!6.35e-07!6;UBERON:0003684!6.35e-07!6;UBERON:0001178!6.35e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;9.76e-14;9!UBERON:0000042;9.76e-14;9!UBERON:0003688;3.11e-12;6!UBERON:0002358;3.11e-12;6!UBERON:0003684;3.11e-12;6!UBERON:0001178;3.11e-12;6!UBERON:0004797;8.10e-08;4!UBERON:0000415;8.10e-08;4!UBERON:0007240;8.10e-08;4!UBERON:0005742;8.10e-08;4!UBERON:0005734;8.10e-08;4!UBERON:0004664;8.10e-08;4!UBERON:0004663;8.10e-08;4!UBERON:0007846;1.86e-07;3!UBERON:0000043;1.86e-07;3!UBERON:0007845;1.86e-07;3!UBERON:0002384;3.82e-07;198!UBERON:0002199;5.91e-07;46!UBERON:0002416;5.91e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.30e-12,6;UBERON:0002358,3.30e-12,6;UBERON:0003684,3.30e-12,6;UBERON:0001178,3.30e-12,6;UBERON:0002199,6.05e-10,46;UBERON:0002416,6.05e-10,46;UBERON:0004457,6.40e-10,12;UBERON:0000042,6.40e-10,12;UBERON:0002384,1.75e-09,371;UBERON:0000415,3.83e-08,4;UBERON:0007240,3.83e-08,4;UBERON:0005742,3.83e-08,4;UBERON:0005734,3.83e-08,4;UBERON:0004664,3.83e-08,4;UBERON:0004663,3.83e-08,4;UBERON:0002097,5.40e-08,41;UBERON:0007846,1.88e-07,3;UBERON:0000043,1.88e-07,3;UBERON:0007845,1.88e-07,3 | |||
|phase1_expression=3.27021082687002,7.27941781229343,2.11431606143957,6.00439790118782,2.68176656656373,6.10636966870258,2.53299878168311,0,0,0,0,0,0,0.123766352960047,0,0,2.41077811209591,0.730310090387373,0.975865597581014,0.246242116153576,0.816002764977012,1.25381888591235,0.85870796139317,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.767175371061182,3.2529523714611,1.00267582127178,1.88300474649071,0,1.45990461090791,0.0945348171640679,0.443458794925128,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0,0.258416759169329,0.35576626268671,0.66944122552934,0,0,0.24406205754817,0,0,0,0,0,1.53316637465883,0,0,0,0,0,2.98183171017191,1.77282716330412,2.64818361626438,9.46560848471085,1.77334191099179,0.560677600142307,1.06748995729705,0.49333509683432,0.311211035399766,0,0.163461903113459,0.151357427644931,0.576175924479999,0,0.312160076830321,0,0.149448680551801,0.23486899728753,0.647491777472526,0.561803226808994,0,0,0,1.18800285728205,3.4617370098998,0.910161361938026,0,0,0,0,0,2.75839016219118,1.05166641234618,0.113432183160021,7.5343646989322,1.70845911054854,1.48352330811693,3.30100205692843,1.64884046781502,5.41045134095821,2.23340227597908,5.73839529620305,1.36411807225678,3.78650661366172,0.368199594569197,1.2931684545505,9.58525899794859,1.5112814734146,0.847802961552438,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,2.3218396401599,4.33127689001751,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36669142910475,1.42198887333556,0,0,0.531876233169741,0,0,0,0.266422179016099,1.14382394926518,0,0,0,0,0.791951872933429,1.20575750823834,0,4.29883862082845,0,0,0,1.67737398844108,0,0,2.17171960001369,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0.500170521059677,0,2.49565033836969,4.10386674233472,0.788512075169673,1.28855556491985,0,0,1.03473071292505,0.664225598535437,0.368738337083406,0.260650843404249,0,0,0,0,0,0,1.66435439510497,0,3.96972492510043,2.14846762603287,6.17452207752762,3.33161788064823,3.58195074346692,8.84696566289841,0,2.15893571323718,1.42049380250502,1.14978018419333,1.55776328755086,2.09178681227927,0,0,0,0.574072240823034,2.54927635209404,0.262248829918848,0,0.0770153371044148,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0,0,0,0,0,4.82051789532479,0,0,0.15350367472613,0,0.214840489736547,0.290033387828457,0.170453254832202,0.0890320356467374,0,0.192190067365106,0,0.10115778085555,0.464845549297286,21.4072395844835,0,0.308033580176089,0,0,0.18532421910392,1.43124886741991,0.372158369359667,0,0.38126038784765,0,0.42793898803392,0.636406495851874,2.35484592059769,0.539617372749944,0.823611089208164,0.706874414074119,0.202182481573316,0,0,0.48763373908959,0.731140468893853,1.05650146756755,0.818999468447914,2.12108147930569,1.13008116620243,0.551365343546124,0.66343897524122,5.26141062304515,0.578775534266688,0.655894752046633,0,0.6196469961995,0.563391205064483,0,0.88424136911809,0,0.354761064070598,2.9555068941673,5.59801318031833,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0.333926115068718,0,0,0.398495976502139,0,0,0,0,2.17727711363265,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.0769502585037971,0.113942055847001,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,7.91135749369436,0,0,0.0821154570532092,0,0,0.451961481561065,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14882720709979,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,2.52209918479682,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0.105600336519406,0,0.191915197319445,0.714695326373367,0,0,5.97299561929084,3.45688596480507,1.95952416065645,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,1.63599316893057,2.77402930751307,0.568209015825267,0.754703705257725,1.77962244319307,1.60188047877847,0.907385542579434,0.310874401165561,0,0.796483835818512,2.69881867298163,0.310525913752519,0.414706207840855,2.12673371646396,5.73919567992907,1.35231848097497,9.52013030421988,2.44122439922797,0.909243296012797,0.429642228169954,6.03243887842042,9.15620544006817,0.400027764663154,1.71697852591396,2.02049693259551,0,0.192619830407303,0.214441591374926,0,0.453411851024545,0.463044948647668,0.489473409012935,1.4327107286519,0.308801447160972,0.438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| ||
|short_description=p@chr5:121406259..121406287,- | |||
}} | }} |
Latest revision as of 09:07, 30 July 2015
Short description: | p@chr5:121406259..121406287, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:121406259..121406287, - |
Coexpression cluster: | C421_Smooth_Fibroblast_epithelioid_hepatic_Sertoli_Ewing_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.23e-27 | 76 |
preadipocyte | 2.37e-17 | 12 |
skin fibroblast | 4.06e-11 | 23 |
mesenchymal cell | 3.36e-10 | 354 |
multi fate stem cell | 9.82e-10 | 427 |
connective tissue cell | 1.16e-09 | 361 |
somatic stem cell | 2.51e-09 | 433 |
fat cell | 3.14e-09 | 15 |
stem cell | 8.34e-09 | 441 |
motile cell | 9.38e-09 | 386 |
stromal cell | 1.30e-08 | 28 |
fibroblast of tunica adventitia of artery | 3.83e-08 | 4 |
fibroblast of the aortic adventitia | 3.83e-08 | 4 |
fibrocyte | 1.88e-07 | 3 |
tendon cell | 1.88e-07 | 3 |
omentum preadipocyte | 3.46e-07 | 3 |
GAG secreting cell | 6.14e-07 | 9 |
carbohydrate secreting cell | 6.14e-07 | 9 |
preadipocyte of the breast | 6.82e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.30e-12 | 6 |
peritoneum | 3.30e-12 | 6 |
abdominal cavity | 3.30e-12 | 6 |
visceral peritoneum | 3.30e-12 | 6 |
integument | 6.05e-10 | 46 |
integumental system | 6.05e-10 | 46 |
cavity lining | 6.40e-10 | 12 |
serous membrane | 6.40e-10 | 12 |
connective tissue | 1.75e-09 | 371 |
artery wall | 3.83e-08 | 4 |
tunica adventitia of artery | 3.83e-08 | 4 |
adventitia | 3.83e-08 | 4 |
tunica adventitia of blood vessel | 3.83e-08 | 4 |
aorta tunica adventitia | 3.83e-08 | 4 |
aorta wall | 3.83e-08 | 4 |
skin of body | 5.40e-08 | 41 |
dense regular connective tissue | 1.88e-07 | 3 |
tendon | 1.88e-07 | 3 |
regular connective tissue | 1.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.90e-09 | 5 |
myotonic disease | 1.90e-09 | 5 |
muscle tissue disease | 1.90e-09 | 5 |
myopathy | 1.90e-09 | 5 |
muscular disease | 1.90e-09 | 5 |
myotonic dystrophy | 1.90e-09 | 5 |
ovarian cancer | 4.44e-08 | 14 |
cell type benign neoplasm | 9.33e-07 | 3 |
leiomyoma | 9.33e-07 | 3 |