FFCP PHASE1:Hg19::chr5:121402258..121402287,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:121402258..121402287,- to FFCP PHASE1:Hg19::chr5:121402258..121402287,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:121402258..121402287,- | |||
|coexpression_cluster_id=C421 | |||
|description=CAGE_peak_at_chr5:121402258..121402287,- | |||
|id=chr5:121402258..121402287,- | |||
|ontology_enrichment_celltype=CL:0000055!2.78e-33!180;CL:0000057!7.33e-24!75;CL:0000048!2.02e-14!430;CL:0000144!3.65e-14!625;CL:0000680!1.31e-13!57;CL:0000056!1.31e-13!57;CL:0000355!1.31e-13!57;CL:0000723!1.53e-13!436;CL:0000034!2.00e-12!444;CL:0000187!2.43e-12!54;CL:0002371!7.93e-12!591;CL:0002620!2.99e-11!23;CL:0000548!3.87e-11!679;CL:0000004!3.87e-11!679;CL:0000255!3.87e-11!679;CL:0000222!8.09e-11!119;CL:0000012!8.78e-11!682;CL:0000393!1.53e-10!60;CL:0000211!1.53e-10!60;CL:0000183!3.08e-10!59;CL:0000359!3.56e-10!32;CL:0000192!5.43e-10!42;CL:0000514!5.43e-10!42;CL:0002334!6.59e-09!12;CL:0000499!2.08e-07!27;CL:0002539!5.53e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.63e-12;12!CL:0002620;6.45e-11;23!CL:0000057;8.05e-09;73!CL:0000499;2.73e-08;28!CL:0002320;1.43e-07;188!CL:1000306;1.43e-07;4!CL:0002547;1.43e-07;4!CL:0000134;2.23e-07;55!CL:0000048;7.11e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.32e-25,76;CL:0000048,1.42e-14,427;CL:0000723,5.24e-14,433;CL:0000034,2.80e-13,441;CL:0002334,1.03e-12,12;CL:0000134,4.00e-11,354;CL:0002620,5.28e-11,23;CL:0002320,5.66e-11,361;CL:0000219,7.63e-09,386;CL:0000499,2.75e-08,28;CL:1000306,1.21e-07,4;CL:0002547,1.21e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.21e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:17;2.00e-08;5!DOID:450;2.00e-08;5!DOID:66;2.00e-08;5!DOID:423;2.00e-08;5!DOID:0080000;2.00e-08;5!DOID:11722;2.00e-08;5!DOID:2394;3.40e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.70e-08,5;DOID:450,1.70e-08,5;DOID:66,1.70e-08,5;DOID:423,1.70e-08,5;DOID:0080000,1.70e-08,5;DOID:11722,1.70e-08,5;DOID:2394,6.02e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!6.89e-13!83;UBERON:0002329!6.89e-13!83;UBERON:0003077!6.89e-13!83;UBERON:0003059!6.89e-13!83;UBERON:0007282!6.89e-13!83;UBERON:0009618!6.89e-13!83;UBERON:0007285!6.89e-13!83;UBERON:0004290!1.41e-12!70;UBERON:0000486!7.78e-12!82;UBERON:0001134!8.12e-12!61;UBERON:0002036!8.12e-12!61;UBERON:0003082!8.12e-12!61;UBERON:0002385!5.09e-11!63;UBERON:0001015!5.09e-11!63;UBERON:0000383!5.09e-11!63;UBERON:0004872!1.79e-09!84;UBERON:0005256!4.99e-09!143;UBERON:0004573!1.57e-08!33;UBERON:0004571!1.57e-08!33;UBERON:0001637!4.45e-08!42;UBERON:0003509!4.45e-08!42;UBERON:0004572!4.45e-08!42;UBERON:0002049!6.29e-08!79;UBERON:0007798!6.29e-08!79;UBERON:0004535!8.23e-08!110;UBERON:0001009!3.24e-07!113;UBERON:0001135!5.11e-07!15;UBERON:0004237!5.53e-07!10;UBERON:0004695!5.53e-07!10;UBERON:0002111!5.53e-07!10;UBERON:0004178!5.53e-07!10;UBERON:0003688!9.64e-07!6;UBERON:0002358!9.64e-07!6;UBERON:0003684!9.64e-07!6;UBERON:0001178!9.64e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;5.62e-12;9!UBERON:0000042;5.62e-12;9!UBERON:0003688;1.27e-10;6!UBERON:0002358;1.27e-10;6!UBERON:0003684;1.27e-10;6!UBERON:0001178;1.27e-10;6!UBERON:0002384;1.44e-08;198!UBERON:0004797;1.43e-07;4!UBERON:0000415;1.43e-07;4!UBERON:0007240;1.43e-07;4!UBERON:0005742;1.43e-07;4!UBERON:0005734;1.43e-07;4!UBERON:0004664;1.43e-07;4!UBERON:0004663;1.43e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.33e-11,371;UBERON:0003688,1.26e-10,6;UBERON:0002358,1.26e-10,6;UBERON:0003684,1.26e-10,6;UBERON:0001178,1.26e-10,6;UBERON:0004457,1.64e-08,12;UBERON:0000042,1.64e-08,12;UBERON:0002199,4.38e-08,46;UBERON:0002416,4.38e-08,46;UBERON:0000415,1.21e-07,4;UBERON:0007240,1.21e-07,4;UBERON:0005742,1.21e-07,4;UBERON:0005734,1.21e-07,4;UBERON:0004664,1.21e-07,4;UBERON:0004663,1.21e-07,4;UBERON:0002097,1.54e-07,41 | |||
|phase1_expression=3.45188920614058,4.71021152560163,2.25527046553554,26.0190575718139,3.12872766099101,20.9361245784089,0,0,0,0.245733936501509,0,0,0,0.247532705920093,0.331397375727916,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0.492484232307152,0.204000691244253,0.313454721478088,0.286235987131057,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.767175371061182,1.44575660953827,1.00267582127178,5.06962816362883,0,6.32625331393427,0.0945348171640679,0.665188192387692,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0.33472061276467,0,0,0.732186172644509,0,0,0.0892997282840798,0,0,1.53316637465883,0,0,0,0,0,7.45457927542978,3.03913227994991,3.70745706277013,10.8997915884549,2.83734705758686,1.68203280042692,1.06748995729705,0.98667019366864,0,0.134710672069688,0,0.454072282934794,1.15235184896,0,0.624320153660641,0,0.448346041655403,0.352303495931295,0.809364721840658,0.140450806702248,0.204154171254893,0,0.206651562351531,1.18800285728205,2.47266929278557,0,0,0,0.125118519871964,0.277064115484183,0,2.14541457059314,1.50238058906597,0.453728732640084,5.91985797773244,2.56268866582281,2.7551147150743,5.40163972951924,1.23663035086127,4.89517026086695,3.53622027030021,4.21940830603166,1.75386609290158,5.80597680761463,1.56484827691909,1.13152239773168,6.39017266529906,2.31729825923573,0.339121184620975,0,0,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,2.3218396401599,4.33127689001751,0.118306800039844,0.337169380156203,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,1.20097467208968,0,0,0,0,0,0,1.44331342025273,0.115930404975077,0.469634776943287,0,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.1466765716419,1.03417372606222,0,2.535908257668,1.59562869950922,1.04007436911366,0,0,0.532844358032199,3.57444984145369,1.08524321078289,0,0.325736184293735,2.84313558994037,0.791951872933429,0.904318131178758,0.871533458600294,3.09916272664377,0,0,0,2.87549826589899,0,0,7.38384664004654,0.410952645100767,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.858840442033979,0,1.08506009479894,1.03985430765404,6.95873056308931,1.41932173530541,0.702848489956279,0.601892199455438,0,1.03473071292505,1.99267679560631,0.921845842708516,1.47702144595741,0,0,0,0,0,0,0,0.604780586659361,4.71404834855676,2.76231551918512,5.3325417942284,2.81906128362542,3.58195074346692,10.4555048743345,10.3892646511494,1.3878872442239,2.66342587969691,0.739144404124282,0,1.51073491997947,0,0,0,0.803701137152247,1.82091168006717,1.18011973463482,0,0.15403067420883,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0,0,0,0,0,4.82051789532479,0.096670718292122,0.154048617114644,0.614014698904518,0,0.322260734604821,0.290033387828457,0.170453254832202,0.445160178233687,0,0.192190067365106,0,0,3.71876439437829,24.5553630527899,0.6970372701606,0.924100740528266,1.06461206063404,1.73986598415015,0.37064843820784,0.286249773483982,0.372158369359667,0,1.71567174531442,0,0.855877976067841,0,0,1.43897966066652,1.37268514868027,1.17812402345686,0.202182481573316,1.58510321173008,0.421258456238981,0,1.46228093778771,1.05650146756755,0.272999822815972,2.40389234321312,2.26016233240486,2.2054613741845,0,2.19225442626881,0,0,0,0,0.845086807596724,0.286822704408103,0.88424136911809,1.07001315444375,0,3.37772216476263,6.58589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.556543525114529,0,0,0.597743964753209,0,0,0,0,6.53183134089796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,12.0390222730132,0,0,0.0821154570532092,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,2.57859264851974,0,0,0,0,0,0,0,0.134366944973453,3.60299883542404,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0.528001682597033,0,0,0.714695326373367,0,0,2.17199840701485,6.91377192961014,4.57222304153173,0,0,0.170388021785422,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34329322598187,2.57084640831947,1.66441758450784,0.189403005275089,2.51567901752575,1.77962244319307,2.51724075236616,1.20984739010591,0.932623203496683,0.443565449968902,0.955780602982214,0.449803112163605,1.39736661188633,0.829412415681711,7.17772629306586,2.08698024724694,3.00515217994437,5.71207818253193,2.03435366602331,2.00033525122815,1.18151612746737,0.928067519756987,6.36953421917786,0.400027764663154,1.7169785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| ||
|short_description=p@chr5:121402258..121402287,- | |||
}} | }} |
Latest revision as of 09:07, 30 July 2015
Short description: | p@chr5:121402258..121402287, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:121402258..121402287, - |
Coexpression cluster: | C421_Smooth_Fibroblast_epithelioid_hepatic_Sertoli_Ewing_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.32e-25 | 76 |
multi fate stem cell | 1.42e-14 | 427 |
somatic stem cell | 5.24e-14 | 433 |
stem cell | 2.80e-13 | 441 |
preadipocyte | 1.03e-12 | 12 |
mesenchymal cell | 4.00e-11 | 354 |
skin fibroblast | 5.28e-11 | 23 |
connective tissue cell | 5.66e-11 | 361 |
motile cell | 7.63e-09 | 386 |
stromal cell | 2.75e-08 | 28 |
fibroblast of tunica adventitia of artery | 1.21e-07 | 4 |
fibroblast of the aortic adventitia | 1.21e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.33e-11 | 371 |
omentum | 1.26e-10 | 6 |
peritoneum | 1.26e-10 | 6 |
abdominal cavity | 1.26e-10 | 6 |
visceral peritoneum | 1.26e-10 | 6 |
cavity lining | 1.64e-08 | 12 |
serous membrane | 1.64e-08 | 12 |
integument | 4.38e-08 | 46 |
integumental system | 4.38e-08 | 46 |
artery wall | 1.21e-07 | 4 |
tunica adventitia of artery | 1.21e-07 | 4 |
adventitia | 1.21e-07 | 4 |
tunica adventitia of blood vessel | 1.21e-07 | 4 |
aorta tunica adventitia | 1.21e-07 | 4 |
aorta wall | 1.21e-07 | 4 |
skin of body | 1.54e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.70e-08 | 5 |
myotonic disease | 1.70e-08 | 5 |
muscle tissue disease | 1.70e-08 | 5 |
myopathy | 1.70e-08 | 5 |
muscular disease | 1.70e-08 | 5 |
myotonic dystrophy | 1.70e-08 | 5 |
ovarian cancer | 6.02e-08 | 14 |