FFCP PHASE1:Hg19::chr5:121402009..121402030,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:121402009..121402030,- | |||
|coexpression_cluster_id=C421 | |coexpression_cluster_id=C421 | ||
|description=CAGE_peak_at_chr5:121402009..121402030,- | |description=CAGE_peak_at_chr5:121402009..121402030,- | ||
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|ontology_enrichment_celltype=CL:0000055!1.53e-33!180;CL:0000057!3.06e-27!75;CL:0002620!8.06e-14!23;CL:0000048!2.88e-13!430;CL:0000723!1.81e-12!436;CL:0000034!1.89e-11!444;CL:0000144!1.21e-10!625;CL:0002334!2.11e-10!12;CL:0000680!2.23e-09!57;CL:0000056!2.23e-09!57;CL:0000355!2.23e-09!57;CL:0002371!4.37e-09!591;CL:0000192!1.55e-08!42;CL:0000514!1.55e-08!42;CL:0000187!3.77e-08!54;CL:0000499!1.21e-07!27;CL:0000548!1.80e-07!679;CL:0000004!1.80e-07!679;CL:0000255!1.80e-07!679;CL:0002320!3.33e-07!365;CL:0000012!3.44e-07!682;CL:0000222!5.11e-07!119;CL:0000359!6.67e-07!32;CL:0000134!9.02e-07!358 | |ontology_enrichment_celltype=CL:0000055!1.53e-33!180;CL:0000057!3.06e-27!75;CL:0002620!8.06e-14!23;CL:0000048!2.88e-13!430;CL:0000723!1.81e-12!436;CL:0000034!1.89e-11!444;CL:0000144!1.21e-10!625;CL:0002334!2.11e-10!12;CL:0000680!2.23e-09!57;CL:0000056!2.23e-09!57;CL:0000355!2.23e-09!57;CL:0002371!4.37e-09!591;CL:0000192!1.55e-08!42;CL:0000514!1.55e-08!42;CL:0000187!3.77e-08!54;CL:0000499!1.21e-07!27;CL:0000548!1.80e-07!679;CL:0000004!1.80e-07!679;CL:0000255!1.80e-07!679;CL:0002320!3.33e-07!365;CL:0000012!3.44e-07!682;CL:0000222!5.11e-07!119;CL:0000359!6.67e-07!32;CL:0000134!9.02e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.26e-11;12!CL:0002620;2.20e-11;23!CL:0000057;5.70e-08;73!CL:1000306;6.27e-08;4!CL:0002547;6.27e-08;4!CL:0000135;1.80e-07;3!CL:0000388;1.80e-07;3!CL:0002579;5.77e-07;3 | |ontology_enrichment_celltype_v019=CL:0002334;1.26e-11;12!CL:0002620;2.20e-11;23!CL:0000057;5.70e-08;73!CL:1000306;6.27e-08;4!CL:0002547;6.27e-08;4!CL:0000135;1.80e-07;3!CL:0000388;1.80e-07;3!CL:0002579;5.77e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.52e-24,76;CL:0002334,1.22e-11,12;CL:0002620,1.65e-11,23;CL:0000048,7.74e-11,427;CL:0000723,2.12e-10,433;CL:0000134,2.20e-10,354;CL:0000034,7.75e-10,441;CL:0002320,7.82e-10,361;CL:0000219,6.97e-09,386;CL:1000306,7.11e-08,4;CL:0002547,7.11e-08,4;CL:0000135,1.73e-07,3;CL:0000388,1.73e-07,3;CL:0000136,3.12e-07,15;CL:0002579,5.56e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!9.94e-10!14 | |ontology_enrichment_disease=DOID:2394!9.94e-10!14 | ||
|ontology_enrichment_disease_v019=DOID:17;6.10e-07;5!DOID:450;6.10e-07;5!DOID:66;6.10e-07;5!DOID:423;6.10e-07;5!DOID:0080000;6.10e-07;5!DOID:11722;6.10e-07;5!DOID:0060084;6.43e-07;3!DOID:127;6.43e-07;3 | |ontology_enrichment_disease_v019=DOID:17;6.10e-07;5!DOID:450;6.10e-07;5!DOID:66;6.10e-07;5!DOID:423;6.10e-07;5!DOID:0080000;6.10e-07;5!DOID:11722;6.10e-07;5!DOID:0060084;6.43e-07;3!DOID:127;6.43e-07;3 | ||
|ontology_enrichment_disease_v019_2=DOID:17,4.84e-07,5;DOID:450,4.84e-07,5;DOID:66,4.84e-07,5;DOID:423,4.84e-07,5;DOID:0080000,4.84e-07,5;DOID:11722,4.84e-07,5;DOID:0060084,6.26e-07,3;DOID:127,6.26e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0004290!3.40e-11!70;UBERON:0000914!1.05e-10!83;UBERON:0002329!1.05e-10!83;UBERON:0003077!1.05e-10!83;UBERON:0003059!1.05e-10!83;UBERON:0007282!1.05e-10!83;UBERON:0009618!1.05e-10!83;UBERON:0007285!1.05e-10!83;UBERON:0001134!3.85e-10!61;UBERON:0002036!3.85e-10!61;UBERON:0003082!3.85e-10!61;UBERON:0000486!1.21e-09!82;UBERON:0002385!1.87e-09!63;UBERON:0001015!1.87e-09!63;UBERON:0000383!1.87e-09!63;UBERON:0002199!7.76e-09!45;UBERON:0002416!7.76e-09!45;UBERON:0002097!3.20e-08!40;UBERON:0004872!9.46e-08!84;UBERON:0002384!1.09e-07!375;UBERON:0003688!4.82e-07!6;UBERON:0002358!4.82e-07!6;UBERON:0003684!4.82e-07!6;UBERON:0001178!4.82e-07!6 | |ontology_enrichment_uberon=UBERON:0004290!3.40e-11!70;UBERON:0000914!1.05e-10!83;UBERON:0002329!1.05e-10!83;UBERON:0003077!1.05e-10!83;UBERON:0003059!1.05e-10!83;UBERON:0007282!1.05e-10!83;UBERON:0009618!1.05e-10!83;UBERON:0007285!1.05e-10!83;UBERON:0001134!3.85e-10!61;UBERON:0002036!3.85e-10!61;UBERON:0003082!3.85e-10!61;UBERON:0000486!1.21e-09!82;UBERON:0002385!1.87e-09!63;UBERON:0001015!1.87e-09!63;UBERON:0000383!1.87e-09!63;UBERON:0002199!7.76e-09!45;UBERON:0002416!7.76e-09!45;UBERON:0002097!3.20e-08!40;UBERON:0004872!9.46e-08!84;UBERON:0002384!1.09e-07!375;UBERON:0003688!4.82e-07!6;UBERON:0002358!4.82e-07!6;UBERON:0003684!4.82e-07!6;UBERON:0001178!4.82e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;7.59e-13;9!UBERON:0000042;7.59e-13;9!UBERON:0003688;1.43e-11;6!UBERON:0002358;1.43e-11;6!UBERON:0003684;1.43e-11;6!UBERON:0001178;1.43e-11;6!UBERON:0004797;6.27e-08;4!UBERON:0000415;6.27e-08;4!UBERON:0007240;6.27e-08;4!UBERON:0005742;6.27e-08;4!UBERON:0005734;6.27e-08;4!UBERON:0004664;6.27e-08;4!UBERON:0004663;6.27e-08;4!UBERON:0007846;1.80e-07;3!UBERON:0000043;1.80e-07;3!UBERON:0007845;1.80e-07;3!UBERON:0002384;5.17e-07;198 | |ontology_enrichment_uberon_v019=UBERON:0004457;7.59e-13;9!UBERON:0000042;7.59e-13;9!UBERON:0003688;1.43e-11;6!UBERON:0002358;1.43e-11;6!UBERON:0003684;1.43e-11;6!UBERON:0001178;1.43e-11;6!UBERON:0004797;6.27e-08;4!UBERON:0000415;6.27e-08;4!UBERON:0007240;6.27e-08;4!UBERON:0005742;6.27e-08;4!UBERON:0005734;6.27e-08;4!UBERON:0004664;6.27e-08;4!UBERON:0004663;6.27e-08;4!UBERON:0007846;1.80e-07;3!UBERON:0000043;1.80e-07;3!UBERON:0007845;1.80e-07;3!UBERON:0002384;5.17e-07;198 | ||
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|phase1_expression=2.72517568905835,6.20891519283851,1.9733616573436,8.00586386825043,1.78784437770915,9.59572376510406,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0,2.01697543935533,0.602694528023977,0,0.487932798790507,0.123121058076788,0.408001382488506,1.25381888591235,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,1.0843174571537,0.50133791063589,4.77993512570718,0.795285947051099,2.43317435151318,0.189069634328136,0.665188192387692,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0.258416759169329,0,0,0.402829317109147,0,0.732186172644509,0,0,0,0,0,0,0,0.183201743930407,0,0,0,1.49091585508596,1.2663051166458,2.25095607382472,8.03142538096678,1.41867352879343,0.560677600142307,1.06748995729705,1.72667283892012,0,0.404132016209064,0.163461903113459,0.302714855289863,0.576175924479999,0.468642863667593,0.312160076830321,0,0.448346041655403,0.117434498643765,1.13311061057692,0.421352420106746,0,0,0.103325781175765,0,2.22540236350701,0,0.718618141816238,0,0,0.277064115484183,0,1.83892677479412,1.20190447125277,0.567160915800105,5.56107870635472,2.98980344345994,2.7551147150743,5.10154863343484,0.824420233907511,5.15281080091258,2.60563598864226,3.37552664482532,0.779496041289589,2.77677151668526,1.93304787148829,0.80823028409406,6.03516307278244,1.61203357164224,1.18692414617341,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,1.39310378409594,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0.112131084345361,0.87192013766656,0.36669142910475,1.29271715757778,0,0.845302752556,1.32969058292435,0,0.257207374262142,0,0.532844358032199,2.43062589218851,0,0,0.325736184293735,2.48774364119782,0,1.80863626235752,0,1.89948683245908,0,0,0,2.87549826589899,0,0,3.61953266668948,0.410952645100767,0.358121926479791,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0.49076596687656,0.500170521059677,0.271265023699736,1.03985430765404,5.17444067511769,0.788512075169673,1.28855556491985,0.902838299183157,0,1.03473071292505,1.32845119707087,1.10621501125022,0.60818530127658,0,0,0,0,0,0,1.66435439510497,0,1.48864684691266,2.14846762603287,7.29716245525991,2.43464383585832,3.58195074346692,5.62988724002626,1.48418066444991,1.23367755042124,2.66342587969691,0.410635780069046,0.519254429183621,0.581051892299796,0,0,0,0.918515585316854,1.82091168006717,1.31124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.64103579064957,0.193341436584244,0,0.15350367472613,0,0.429680979473094,0.290033387828457,0,0.267096106940212,0,0,0,0.2023155617111,1.85938219718914,15.740617341532,0,0.924100740528266,0,0.869932992075073,0,0.286249773483982,0.372158369359667,0,0.571890581771475,0.255897791311334,0,0,0.78494864019923,1.07923474549989,0.823611089208164,0.353437207037059,0.202182481573316,0,0.421258456238981,0,0.487426979262569,1.05650146756755,0.409499734223957,1.55545975149084,0,1.65409603063837,0.66343897524122,1.31535265576129,0.578775534266688,0,0.608731130888112,1.239293992399,0,0.286822704408103,0.294747123039363,0,0,1.47775344708365,3.95153871551882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,1.00177834520615,0,0,0,0,0,0,0,6.22079175323615,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,9.45923178593891,0.0967563312890851,0.0730893170861856,0,0,0,0.225980740780532,0.274083849293502,0,0,0,0,0,0,0,0,0,0,0,0,0.543616824294456,0.209205692624666,0,0,0,0,0,2.14882720709979,0,0.558564802544508,0,0.717873024576814,0,0,0,0,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844802692155252,0,0,0,0,0,2.71499800876856,3.45688596480507,4.24563568142232,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,1.04478362020812,2.10341978862502,2.21922344601045,0.568209015825267,1.25783950876288,0,1.60188047877847,1.05861646634267,0.310874401165561,0.147855149989634,0.955780602982214,0.449803112163605,0.931577741257556,0.829412415681711,5.84851772027589,1.5652351854352,4.50772826991655,4.56966254602554,2.03435366602331,0.727394636810238,1.39633724155235,0.928067519756987,4.37905477568478,0.400027764663154,1.71697852591396,1.34699795506368,0,0,0,0,1.13352962756136,1.15761237161917,0.489473409012935,0.895444205407437,0,0.219284049578707,1.59020231351293,0.964570191354574,1.01365464391844,0,0,0.303859956177382,0,0,0,0,0,0.737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| ||
|short_description=p@chr5:121402009..121402030,- | |short_description=p@chr5:121402009..121402030,- | ||
}} | }} |
Latest revision as of 09:07, 30 July 2015
Short description: | p@chr5:121402009..121402030, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:121402009..121402030, - |
Coexpression cluster: | C421_Smooth_Fibroblast_epithelioid_hepatic_Sertoli_Ewing_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.52e-24 | 76 |
preadipocyte | 1.22e-11 | 12 |
skin fibroblast | 1.65e-11 | 23 |
multi fate stem cell | 7.74e-11 | 427 |
somatic stem cell | 2.12e-10 | 433 |
mesenchymal cell | 2.20e-10 | 354 |
stem cell | 7.75e-10 | 441 |
connective tissue cell | 7.82e-10 | 361 |
motile cell | 6.97e-09 | 386 |
fibroblast of tunica adventitia of artery | 7.11e-08 | 4 |
fibroblast of the aortic adventitia | 7.11e-08 | 4 |
fibrocyte | 1.73e-07 | 3 |
tendon cell | 1.73e-07 | 3 |
fat cell | 3.12e-07 | 15 |
omentum preadipocyte | 5.56e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 5.47e-12 | 6 |
peritoneum | 5.47e-12 | 6 |
abdominal cavity | 5.47e-12 | 6 |
visceral peritoneum | 5.47e-12 | 6 |
connective tissue | 4.03e-10 | 371 |
cavity lining | 1.60e-09 | 12 |
serous membrane | 1.60e-09 | 12 |
integument | 6.90e-09 | 46 |
integumental system | 6.90e-09 | 46 |
skin of body | 4.11e-08 | 41 |
artery wall | 7.11e-08 | 4 |
tunica adventitia of artery | 7.11e-08 | 4 |
adventitia | 7.11e-08 | 4 |
tunica adventitia of blood vessel | 7.11e-08 | 4 |
aorta tunica adventitia | 7.11e-08 | 4 |
aorta wall | 7.11e-08 | 4 |
dense regular connective tissue | 1.73e-07 | 3 |
tendon | 1.73e-07 | 3 |
regular connective tissue | 1.73e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.84e-07 | 5 |
myotonic disease | 4.84e-07 | 5 |
muscle tissue disease | 4.84e-07 | 5 |
myopathy | 4.84e-07 | 5 |
muscular disease | 4.84e-07 | 5 |
myotonic dystrophy | 4.84e-07 | 5 |
cell type benign neoplasm | 6.26e-07 | 3 |
leiomyoma | 6.26e-07 | 3 |