FFCP PHASE1:Hg19::chr5:121401698..121401726,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:121401698..121401726,- | |||
|coexpression_cluster_id=C421 | |||
|description=CAGE_peak_at_chr5:121401698..121401726,- | |description=CAGE_peak_at_chr5:121401698..121401726,- | ||
|id=chr5:121401698..121401726,- | |id=chr5:121401698..121401726,- | ||
|ontology_enrichment_celltype=CL:0000055!6.62e-24!180;CL:0000057!3.60e-19!75;CL:0002620!6.07e-13!23;CL:0000048!1.05e-11!430;CL:0002334!3.83e-11!12;CL:0000723!4.39e-11!436;CL:0000144!9.18e-11!625;CL:0000034!1.15e-10!444;CL:0000680!3.72e-09!57;CL:0000056!3.72e-09!57;CL:0000355!3.72e-09!57;CL:0002371!4.74e-09!591;CL:0000548!2.16e-08!679;CL:0000004!2.16e-08!679;CL:0000255!2.16e-08!679;CL:0000012!3.71e-08!682;CL:0000187!1.72e-07!54;CL:0000222!2.82e-07!119 | |ontology_enrichment_celltype=CL:0000055!6.62e-24!180;CL:0000057!3.60e-19!75;CL:0002620!6.07e-13!23;CL:0000048!1.05e-11!430;CL:0002334!3.83e-11!12;CL:0000723!4.39e-11!436;CL:0000144!9.18e-11!625;CL:0000034!1.15e-10!444;CL:0000680!3.72e-09!57;CL:0000056!3.72e-09!57;CL:0000355!3.72e-09!57;CL:0002371!4.74e-09!591;CL:0000548!2.16e-08!679;CL:0000004!2.16e-08!679;CL:0000255!2.16e-08!679;CL:0000012!3.71e-08!682;CL:0000187!1.72e-07!54;CL:0000222!2.82e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.07e-15;23!CL:0002579;3.95e-13;3!CL:0000135;3.35e-12;3!CL:0000388;3.35e-12;3!CL:0002334;7.83e-12;12!CL:0002617;4.54e-09;2!CL:0000136;9.78e-08;13!CL:0000153;3.54e-07;9!CL:0000447;3.54e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.29e-20,76;CL:0002620,1.16e-15,23;CL:0002579,5.98e-13,3;CL:0000135,1.39e-12,3;CL:0000388,1.39e-12,3;CL:0002334,7.81e-12,12;CL:0000136,3.85e-09,15;CL:0000134,4.41e-09,354;CL:0002617,7.54e-09,2;CL:0002320,9.77e-09,361;CL:0000048,1.12e-08,427;CL:0000723,1.99e-08,433;CL:0000034,4.21e-08,441;CL:0000219,1.59e-07,386;CL:0000153,4.91e-07,9;CL:0000447,4.91e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!7.00e-09!14;DOID:17!4.84e-07!5;DOID:450!4.84e-07!5;DOID:66!4.84e-07!5;DOID:423!4.84e-07!5;DOID:0080000!4.84e-07!5;DOID:11722!4.84e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.84e-13;5!DOID:450;1.84e-13;5!DOID:66;1.84e-13;5!DOID:423;1.84e-13;5!DOID:0080000;1.84e-13;5!DOID:11722;1.84e-13;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.60e-13,5;DOID:450,2.60e-13,5;DOID:66,2.60e-13,5;DOID:423,2.60e-13,5;DOID:0080000,2.60e-13,5;DOID:11722,2.60e-13,5;DOID:2394,8.02e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!7.34e-09!61;UBERON:0002036!7.34e-09!61;UBERON:0003082!7.34e-09!61;UBERON:0004290!1.53e-08!70;UBERON:0002385!2.59e-08!63;UBERON:0001015!2.59e-08!63;UBERON:0000383!2.59e-08!63;UBERON:0003688!2.79e-08!6;UBERON:0002358!2.79e-08!6;UBERON:0003684!2.79e-08!6;UBERON:0001178!2.79e-08!6;UBERON:0002199!7.25e-08!45;UBERON:0002416!7.25e-08!45;UBERON:0000914!1.18e-07!83;UBERON:0002329!1.18e-07!83;UBERON:0003077!1.18e-07!83;UBERON:0003059!1.18e-07!83;UBERON:0007282!1.18e-07!83;UBERON:0009618!1.18e-07!83;UBERON:0007285!1.18e-07!83;UBERON:0000486!2.43e-07!82;UBERON:0002097!7.45e-07!40;UBERON:0004872!8.76e-07!84 | |ontology_enrichment_uberon=UBERON:0001134!7.34e-09!61;UBERON:0002036!7.34e-09!61;UBERON:0003082!7.34e-09!61;UBERON:0004290!1.53e-08!70;UBERON:0002385!2.59e-08!63;UBERON:0001015!2.59e-08!63;UBERON:0000383!2.59e-08!63;UBERON:0003688!2.79e-08!6;UBERON:0002358!2.79e-08!6;UBERON:0003684!2.79e-08!6;UBERON:0001178!2.79e-08!6;UBERON:0002199!7.25e-08!45;UBERON:0002416!7.25e-08!45;UBERON:0000914!1.18e-07!83;UBERON:0002329!1.18e-07!83;UBERON:0003077!1.18e-07!83;UBERON:0003059!1.18e-07!83;UBERON:0007282!1.18e-07!83;UBERON:0009618!1.18e-07!83;UBERON:0007285!1.18e-07!83;UBERON:0000486!2.43e-07!82;UBERON:0002097!7.45e-07!40;UBERON:0004872!8.76e-07!84 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.48e-17;6!UBERON:0002358;3.48e-17;6!UBERON:0003684;3.48e-17;6!UBERON:0001178;3.48e-17;6!UBERON:0004457;3.88e-16;9!UBERON:0000042;3.88e-16;9!UBERON:0007846;3.35e-12;3!UBERON:0000043;3.35e-12;3!UBERON:0007845;3.35e-12;3!UBERON:0005406;3.35e-09;2!UBERON:0002118;1.68e-07;5!UBERON:0000310;9.63e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.71e-17,6;UBERON:0002358,5.71e-17,6;UBERON:0003684,5.71e-17,6;UBERON:0001178,5.71e-17,6;UBERON:0007846,1.39e-12,3;UBERON:0000043,1.39e-12,3;UBERON:0007845,1.39e-12,3;UBERON:0004457,7.66e-12,12;UBERON:0000042,7.66e-12,12;UBERON:0005406,2.43e-09,2;UBERON:0002384,5.05e-09,371;UBERON:0002097,6.19e-08,41;UBERON:0002118,1.52e-07,5;UBERON:0002199,7.17e-07,46;UBERON:0002416,7.17e-07,46 | |||
|phase1_expression=1.09007027562334,2.35510576280081,1.26858963686374,5.00366491765652,0.446961094427288,3.48935409640147,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0,0.626909442956176,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.255725123687061,1.44575660953827,1.00267582127178,1.01392563272577,0,0.973269740605272,0.0945348171640679,0.443458794925128,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,2.98183171017191,0.759783069987479,0.662045904066094,4.58938593198102,0.709336764396714,0,0,0.49333509683432,0,0,0.163461903113459,0,0,0,0,0,0.597794722207204,0.117434498643765,0.161872944368132,0,0,0,0,0,1.23633464639278,0,0.718618141816238,0,0,0,0,0.612975591598039,0.600952235626387,0,2.33206526395521,1.2813443329114,2.11931901159562,2.70081986475962,0.412210116953756,1.8034837803194,1.30281799432113,3.03797398034279,0.68205903612839,1.00973509697646,1.47279837827679,0.161646056818812,3.55009592516614,0.403008392910561,0.169560592310488,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0,0,0.266422179016099,1.28680194292333,0,0,0,0.355391948742546,0,0.904318131178758,0,0.99972991182057,0,0,0,0.718874566474748,0,0,1.44781306667579,0.410952645100767,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,1.24782516918484,1.42743191037729,0.473107245101804,0.702848489956279,0,0,0,0,0.368738337083406,0.347534457872331,0,0,0,0,0,0,0,0,2.48107807818777,0.920771839728375,2.80660094433074,2.56278298511402,1.02341449813341,4.66476371316462,1.48418066444991,0.771048469013278,0.710246901252508,0.0821271560138091,0,0.232420756919918,0,0.200506470303285,0,0.459257792658427,0.546273504020151,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,1.6068392984416,0,0.154048617114644,0,0.137836572484531,0,0.145016693914229,0,0.267096106940212,0,0.192190067365106,0,0,0.464845549297286,17.3146790756852,0,0,0.532306030317022,0,0.18532421910392,0.286249773483982,0,0,0.190630193923825,0,0.855877976067841,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0.989838023675989,1.13008116620243,0.551365343546124,0.66343897524122,0.876901770507525,0,0,0.405820753925408,0.30982349809975,0.281695602532241,0.143411352204052,0.196498082026242,0.35667105148125,0,0.422215270595328,2.96365403663912,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,3.0957485844891,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0.203996435272644,0,0,0,0,0.859530882839914,0,0,0.229160424011684,0,0,0,0,0,0.720599767084807,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0.701139929541673,1.66441758450784,0.568209015825267,0.251567901752575,0,0.915360273587694,0.453692771289717,0.466311601748341,0.147855149989634,0.477890301491107,0.899606224327209,0.776314784381297,0.414706207840855,1.59505028734797,0,0,1.52322084867518,1.22061219961398,0.181848659202559,0.966695013382396,1.39210127963548,1.59238355479446,0,1.37358282073117,0.673498977531838,0,0,0,0,0,0.463044948647668,0,0.358177682162975,0,0.657852148736121,0.530067437837643,0.192914038270915,1.01365464391844,0,0,0,0,0,0,0,0.327609848846413,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0.078493092850514,0,0,0,0,1.43325506366115,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37897960562944,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48798007266701,1.84870251452567,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560659312903067,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 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| ||
|short_description=p@chr5:121401698..121401726,- | |short_description=p@chr5:121401698..121401726,- | ||
}} | }} |
Latest revision as of 09:07, 30 July 2015
Short description: | p@chr5:121401698..121401726, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:121401698..121401726, - |
Coexpression cluster: | C421_Smooth_Fibroblast_epithelioid_hepatic_Sertoli_Ewing_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.29e-20 | 76 |
skin fibroblast | 1.16e-15 | 23 |
omentum preadipocyte | 5.98e-13 | 3 |
fibrocyte | 1.39e-12 | 3 |
tendon cell | 1.39e-12 | 3 |
preadipocyte | 7.81e-12 | 12 |
fat cell | 3.85e-09 | 15 |
mesenchymal cell | 4.41e-09 | 354 |
adipocyte of breast | 7.54e-09 | 2 |
connective tissue cell | 9.77e-09 | 361 |
multi fate stem cell | 1.12e-08 | 427 |
somatic stem cell | 1.99e-08 | 433 |
stem cell | 4.21e-08 | 441 |
motile cell | 1.59e-07 | 386 |
GAG secreting cell | 4.91e-07 | 9 |
carbohydrate secreting cell | 4.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
omentum | 5.71e-17 | 6 |
peritoneum | 5.71e-17 | 6 |
abdominal cavity | 5.71e-17 | 6 |
visceral peritoneum | 5.71e-17 | 6 |
dense regular connective tissue | 1.39e-12 | 3 |
tendon | 1.39e-12 | 3 |
regular connective tissue | 1.39e-12 | 3 |
cavity lining | 7.66e-12 | 12 |
serous membrane | 7.66e-12 | 12 |
perirenal fat | 2.43e-09 | 2 |
connective tissue | 5.05e-09 | 371 |
skin of body | 6.19e-08 | 41 |
right ovary | 1.52e-07 | 5 |
integument | 7.17e-07 | 46 |
integumental system | 7.17e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.60e-13 | 5 |
myotonic disease | 2.60e-13 | 5 |
muscle tissue disease | 2.60e-13 | 5 |
myopathy | 2.60e-13 | 5 |
muscular disease | 2.60e-13 | 5 |
myotonic dystrophy | 2.60e-13 | 5 |
ovarian cancer | 8.02e-07 | 14 |