FFCP PHASE1:Hg19::chr5:121400825..121400873,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:121400825..121400873,- | |||
|coexpression_cluster_id=C421 | |||
|description=CAGE_peak_at_chr5:121400825..121400873,- | |description=CAGE_peak_at_chr5:121400825..121400873,- | ||
|id=chr5:121400825..121400873,- | |id=chr5:121400825..121400873,- | ||
|ontology_enrichment_celltype=CL:0000055!7.54e-38!180;CL:0000057!1.15e-24!75;CL:0000680!1.14e-16!57;CL:0000056!1.14e-16!57;CL:0000355!1.14e-16!57;CL:0000187!4.57e-15!54;CL:0000048!1.60e-14!430;CL:0000723!1.29e-13!436;CL:0002620!2.36e-13!23;CL:0000144!2.88e-13!625;CL:0000183!3.01e-13!59;CL:0000034!3.72e-13!444;CL:0000192!5.03e-13!42;CL:0000514!5.03e-13!42;CL:0000359!1.25e-12!32;CL:0002371!2.12e-12!591;CL:0000222!2.40e-12!119;CL:0000393!4.08e-12!60;CL:0000211!4.08e-12!60;CL:0002334!4.72e-11!12;CL:0000012!1.77e-09!682;CL:0000548!1.95e-09!679;CL:0000004!1.95e-09!679;CL:0000255!1.95e-09!679;CL:0002494!2.60e-07!16;CL:0002539!8.32e-07!10 | |ontology_enrichment_celltype=CL:0000055!7.54e-38!180;CL:0000057!1.15e-24!75;CL:0000680!1.14e-16!57;CL:0000056!1.14e-16!57;CL:0000355!1.14e-16!57;CL:0000187!4.57e-15!54;CL:0000048!1.60e-14!430;CL:0000723!1.29e-13!436;CL:0002620!2.36e-13!23;CL:0000144!2.88e-13!625;CL:0000183!3.01e-13!59;CL:0000034!3.72e-13!444;CL:0000192!5.03e-13!42;CL:0000514!5.03e-13!42;CL:0000359!1.25e-12!32;CL:0002371!2.12e-12!591;CL:0000222!2.40e-12!119;CL:0000393!4.08e-12!60;CL:0000211!4.08e-12!60;CL:0002334!4.72e-11!12;CL:0000012!1.77e-09!682;CL:0000548!1.95e-09!679;CL:0000004!1.95e-09!679;CL:0000255!1.95e-09!679;CL:0002494!2.60e-07!16;CL:0002539!8.32e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.42e-17;12!CL:0002620;7.94e-11;23!CL:0000057;3.42e-08;73!CL:0000134;6.19e-07;55!CL:0002320;8.88e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.98e-24,76;CL:0002334,1.08e-17,12;CL:0000048,1.88e-13,427;CL:0000723,6.83e-13,433;CL:0000034,3.60e-12,441;CL:0002620,7.40e-11,23;CL:0000134,1.53e-08,354;CL:0002320,2.24e-08,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!8.46e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.88e-09;14!DOID:17;1.41e-08;5!DOID:450;1.41e-08;5!DOID:66;1.41e-08;5!DOID:423;1.41e-08;5!DOID:0080000;1.41e-08;5!DOID:11722;1.41e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.23e-09,14;DOID:17,1.08e-08,5;DOID:450,1.08e-08,5;DOID:66,1.08e-08,5;DOID:423,1.08e-08,5;DOID:0080000,1.08e-08,5;DOID:11722,1.08e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!7.39e-17!83;UBERON:0002329!7.39e-17!83;UBERON:0003077!7.39e-17!83;UBERON:0003059!7.39e-17!83;UBERON:0007282!7.39e-17!83;UBERON:0009618!7.39e-17!83;UBERON:0007285!7.39e-17!83;UBERON:0004290!2.24e-16!70;UBERON:0001134!3.57e-15!61;UBERON:0002036!3.57e-15!61;UBERON:0003082!3.57e-15!61;UBERON:0002385!3.45e-14!63;UBERON:0001015!3.45e-14!63;UBERON:0000383!3.45e-14!63;UBERON:0000486!7.44e-14!82;UBERON:0004872!2.00e-10!84;UBERON:0005256!4.68e-10!143;UBERON:0004573!7.99e-10!33;UBERON:0004571!7.99e-10!33;UBERON:0001637!9.69e-10!42;UBERON:0003509!9.69e-10!42;UBERON:0004572!9.69e-10!42;UBERON:0002049!1.23e-09!79;UBERON:0007798!1.23e-09!79;UBERON:0004535!2.12e-09!110;UBERON:0001009!1.06e-08!113;UBERON:0002199!1.21e-08!45;UBERON:0002416!1.21e-08!45;UBERON:0000055!6.92e-08!69;UBERON:0002100!1.26e-07!216;UBERON:0002097!1.78e-07!40;UBERON:0000490!2.77e-07!138;UBERON:0003914!3.57e-07!118;UBERON:0001981!4.01e-07!60;UBERON:0007500!4.01e-07!60;UBERON:0004537!4.01e-07!60;UBERON:0006965!4.01e-07!60;UBERON:0004237!8.32e-07!10;UBERON:0004695!8.32e-07!10;UBERON:0002111!8.32e-07!10;UBERON:0004178!8.32e-07!10;UBERON:0001135!9.33e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.16e-11;9!UBERON:0000042;3.16e-11;9!UBERON:0003688;5.41e-10;6!UBERON:0002358;5.41e-10;6!UBERON:0003684;5.41e-10;6!UBERON:0001178;5.41e-10;6!UBERON:0002384;2.67e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.67e-10,6;UBERON:0002358,4.67e-10,6;UBERON:0003684,4.67e-10,6;UBERON:0001178,4.67e-10,6;UBERON:0002384,5.06e-09,371;UBERON:0004457,5.84e-08,12;UBERON:0000042,5.84e-08,12;UBERON:0002199,1.21e-07,46;UBERON:0002416,1.21e-07,46;UBERON:0002097,4.10e-07,41 | |||
|phase1_expression=4.90531624030503,3.8538094300377,3.80576891059122,22.0161256376887,2.68176656656373,13.9574163856059,0,0.631719873426831,0.261185628199839,0.491467873003018,0,0,0,0.123766352960047,0.994192127183747,0.672325146451775,1.20538905604795,0.730310090387373,1.46379839637152,0.861847406537515,0.408001382488506,0.313454721478088,0.572471974262113,0.410623275218653,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,1.34140171940727,0.767175371061182,6.14446559053763,1.50401373190767,4.63508860674636,0,4.37971383272372,0.283604451492204,1.33037638477538,0.87834785693126,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0.516833518338658,0.35576626268671,1.00416183829401,0,0,0.488124115096339,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,11.9273268406876,2.40597972162702,4.10468460520978,18.0707071071753,1.41867352879343,0.560677600142307,2.1349799145941,1.97334038733728,0.311211035399766,0.538842688278752,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0.570471821544449,0.448346041655403,0.23486899728753,0.647491777472526,0.561803226808994,0.408308342509787,0,0,3.56400857184616,2.47266929278557,0,0,0.168336113954066,0.250237039743928,0,0.877955241761676,2.14541457059314,0.300476117813194,0.794025282120147,8.9694817844431,5.12537733164562,6.14602513362729,11.7035527472917,1.8549455262919,7.47157566132325,5.76962254627928,6.24472429292685,2.33848812386877,4.79624171063818,2.48534726334208,0.646584227275248,10.2952781829818,2.31729825923573,2.37384829234683,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,1.85747171212792,2.16563844500876,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,1.3725424823882,0,0,0,0,0,0,1.44331342025273,0.231860809950154,1.17408694235822,0.144366447761074,0.925971025153221,0.761016608938393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.224262168690721,0.87192013766656,0.36669142910475,2.97324946242889,0,1.690605505112,1.86156681609409,2.08014873822732,0.257207374262142,0,0.532844358032199,2.43062589218851,0,0,0,0.710783897485092,0,1.50719688529793,0,2.39935178836937,0,0,0,2.87549826589899,1.14861935834114,0,9.70034754672781,0.61642896765115,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,1.00034104211935,0.271265023699736,2.07970861530807,3.03329280955175,1.26161932027148,1.52283839490527,0.902838299183157,0,0,1.32845119707087,0.921845842708516,0.868836144680828,0,0,0,0,0,0,0,0.30239029332968,9.42809669711352,4.75732117192994,5.05188169979532,5.38184426873944,4.09365799253363,6.75586468803151,13.3576259800492,1.54209693802656,4.97172830876756,2.87445046048332,2.07701771673448,2.78904908303902,0,0,0,0.803701137152247,2.54927635209404,1.04899531967539,0,0,0,0,0.316654886678627,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0.769350375349168,0.656029291399411,0,0,0,0,0,0,12.8547143875328,0.193341436584244,0,0.15350367472613,0.275673144969061,0.322260734604821,0.290033387828457,0.340906509664404,0.356128142586949,0.165284915360978,0,0.127612712494584,0,4.64845549297286,37.7774816196768,0.6970372701606,0.308033580176089,1.06461206063404,2.60979897622522,0.55597265731176,0.715624433709956,0.372158369359667,0.632758849437452,0.953150969619124,0,1.28381696410176,0.95460974377781,1.56989728039846,1.61885211824983,1.37268514868027,1.06031162111118,0.808729926293264,0,0.842516912477962,0,2.68084838594413,0,0.545999645631943,1.97967604735198,1.13008116620243,0.551365343546124,1.32687795048244,3.06915619677634,0,1.31178950409327,1.01455188481352,0.6196469961995,0.563391205064483,0.573645408816206,0.589494246078727,0,0,4.01104507065562,7.24448764511784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,1.00177834520615,0,0,0.398495976502139,0,0,0,0,9.95326680517784,0,0,0,0,0,3.33410970433911,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0.278847488557207,0.0769502585037971,0.341826167541004,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,12.7269664028996,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,0,0.543616824294456,0.104602846312333,0,0,0,0,0,3.43812353135966,0,0,0,0,0,0,0,0.0671834724867263,5.04419836959365,0,0,0.164831716762333,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0.633602019116439,0,0,0,0,0,7.05899482279827,12.0991008768177,2.61269888087527,0,0,0.170388021785422,0,0,0,0,0,0,0,0.320362237703084,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,1.64180283175561,3.50569964770837,4.99325275352352,0.757612021100357,3.0188148210309,2.66943366478961,2.74608082076308,1.51230923763239,0.466311601748341,0.591420599958536,1.43367090447332,1.3494093364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| ||
|short_description=p@chr5:121400825..121400873,- | |short_description=p@chr5:121400825..121400873,- | ||
}} | }} |
Latest revision as of 09:07, 30 July 2015
Short description: | p@chr5:121400825..121400873, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:121400825..121400873, - |
Coexpression cluster: | C421_Smooth_Fibroblast_epithelioid_hepatic_Sertoli_Ewing_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.98e-24 | 76 |
preadipocyte | 1.08e-17 | 12 |
multi fate stem cell | 1.88e-13 | 427 |
somatic stem cell | 6.83e-13 | 433 |
stem cell | 3.60e-12 | 441 |
skin fibroblast | 7.40e-11 | 23 |
mesenchymal cell | 1.53e-08 | 354 |
connective tissue cell | 2.24e-08 | 361 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.67e-10 | 6 |
peritoneum | 4.67e-10 | 6 |
abdominal cavity | 4.67e-10 | 6 |
visceral peritoneum | 4.67e-10 | 6 |
connective tissue | 5.06e-09 | 371 |
cavity lining | 5.84e-08 | 12 |
serous membrane | 5.84e-08 | 12 |
integument | 1.21e-07 | 46 |
integumental system | 1.21e-07 | 46 |
skin of body | 4.10e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.23e-09 | 14 |
musculoskeletal system disease | 1.08e-08 | 5 |
myotonic disease | 1.08e-08 | 5 |
muscle tissue disease | 1.08e-08 | 5 |
myopathy | 1.08e-08 | 5 |
muscular disease | 1.08e-08 | 5 |
myotonic dystrophy | 1.08e-08 | 5 |