FFCP PHASE1:Hg19::chr5:121399703..121399718,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:121399703..121399718,- | |||
|coexpression_cluster_id=C421 | |||
|description=CAGE_peak_at_chr5:121399703..121399718,- | |||
|id=chr5:121399703..121399718,- | |||
|ontology_enrichment_celltype=CL:0000055!3.65e-28!180;CL:0000057!5.03e-16!75;CL:0000680!3.07e-13!57;CL:0000056!3.07e-13!57;CL:0000355!3.07e-13!57;CL:0002620!9.97e-12!23;CL:0000187!1.58e-11!54;CL:0000048!1.81e-10!430;CL:0000393!5.40e-10!60;CL:0000211!5.40e-10!60;CL:0000723!9.12e-10!436;CL:0000183!1.39e-09!59;CL:0000144!1.43e-09!625;CL:0000034!3.73e-09!444;CL:0002334!5.65e-09!12;CL:0002371!5.81e-09!591;CL:0000222!7.04e-09!119;CL:0000192!7.53e-09!42;CL:0000514!7.53e-09!42;CL:0000548!2.60e-07!679;CL:0000004!2.60e-07!679;CL:0000255!2.60e-07!679;CL:0000359!2.84e-07!32;CL:0000012!4.97e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0002334;6.04e-14;12!CL:0002620;6.96e-13;23!CL:0000135;1.56e-07;3!CL:0000388;1.56e-07;3!CL:0000057;3.90e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.12e-21,76;CL:0002334,4.41e-14,12;CL:0002620,8.73e-13,23;CL:0000048,1.14e-11,427;CL:0000723,3.20e-11,433;CL:0000034,1.22e-10,441;CL:0000134,1.93e-09,354;CL:0002320,6.26e-09,361;CL:0000135,1.59e-07,3;CL:0000388,1.59e-07,3;CL:0000219,3.63e-07,386;CL:0002580,8.50e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.85e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.35e-10;14!DOID:0060084;3.69e-07;3!DOID:127;3.69e-07;3!DOID:17;7.30e-07;5!DOID:450;7.30e-07;5!DOID:66;7.30e-07;5!DOID:423;7.30e-07;5!DOID:0080000;7.30e-07;5!DOID:11722;7.30e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.27e-10,14;DOID:0060084,3.26e-07,3;DOID:127,3.26e-07,3;DOID:17,8.49e-07,5;DOID:450,8.49e-07,5;DOID:66,8.49e-07,5;DOID:423,8.49e-07,5;DOID:0080000,8.49e-07,5;DOID:11722,8.49e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.07e-13!83;UBERON:0002329!1.07e-13!83;UBERON:0003077!1.07e-13!83;UBERON:0003059!1.07e-13!83;UBERON:0007282!1.07e-13!83;UBERON:0009618!1.07e-13!83;UBERON:0007285!1.07e-13!83;UBERON:0004290!1.37e-13!70;UBERON:0001134!1.93e-12!61;UBERON:0002036!1.93e-12!61;UBERON:0003082!1.93e-12!61;UBERON:0000486!8.43e-12!82;UBERON:0002385!1.25e-11!63;UBERON:0001015!1.25e-11!63;UBERON:0000383!1.25e-11!63;UBERON:0005256!5.60e-08!143;UBERON:0002199!6.09e-08!45;UBERON:0002416!6.09e-08!45;UBERON:0002097!2.85e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.20e-10;9!UBERON:0000042;3.20e-10;9!UBERON:0002199;3.29e-09;46!UBERON:0002416;3.29e-09;46!UBERON:0002097;5.08e-09;41!UBERON:0003688;4.87e-08;6!UBERON:0002358;4.87e-08;6!UBERON:0003684;4.87e-08;6!UBERON:0001178;4.87e-08;6!UBERON:0007846;1.56e-07;3!UBERON:0000043;1.56e-07;3!UBERON:0007845;1.56e-07;3!UBERON:0002384;6.08e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.61e-12,46;UBERON:0002416,1.61e-12,46;UBERON:0002097,1.12e-11,41;UBERON:0002384,8.88e-10,371;UBERON:0003688,3.58e-08,6;UBERON:0002358,3.58e-08,6;UBERON:0003684,3.58e-08,6;UBERON:0001178,3.58e-08,6;UBERON:0007846,1.59e-07,3;UBERON:0000043,1.59e-07,3;UBERON:0007845,1.59e-07,3;UBERON:0004457,1.84e-07,12;UBERON:0000042,1.84e-07,12 | |||
|phase1_expression=3.08853244759946,2.99740733447376,0.704772020479856,10.007329835313,1.78784437770915,6.10636966870258,0,0,0.261185628199839,0,0,0,0,0,0.994192127183747,0.672325146451775,1.20538905604795,0,0.487932798790507,0,0.204000691244253,0,0.286235987131057,0.410623275218653,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,1.40648818027883,1.80719576192283,1.50401373190767,3.76600949298142,0,0.973269740605272,0.0945348171640679,0.221729397462564,0.702678285545008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06729878806013,0.33472061276467,0.805658634218294,0.760272105718513,0,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,6.46063537203914,2.65924074495618,1.45650098894541,8.3182620017156,0.354668382198357,0,0,1.72667283892012,0,0,0,0.605429710579726,2.30470369792,0,0.624320153660641,0,1.04614076386261,0.117434498643765,0.323745888736263,0.421352420106746,0,0,0,0,2.22540236350701,0,0,0,0,0,0.877955241761676,2.14541457059314,0.751190294532984,0.680593098960126,2.51145489964407,3.20336083227851,3.17897851739343,3.00091096084402,0.92747276314595,2.57640540045629,1.8611685633159,2.70042131586026,1.26668106709558,3.28163906517349,1.19664868234989,1.61646056818812,6.39017266529906,1.30977727695932,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,1.28648187638577,0,2.3218396401599,4.33127689001751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.115930404975077,0.469634776943287,0,0.462985512576611,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0.775630294546667,0,0.845302752556,0.797814349754612,0,0,0,0,0.714889968290738,1.62786481617433,0,0,1.77695974371273,0.791951872933429,0.301439377059586,0.871533458600294,1.3996218765488,0,0,0,2.39624855491583,0,0,3.04040744001916,2.05476322550383,0.716243852959582,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0.500170521059677,0,3.53550464602372,2.14114786556594,1.89242898040722,1.87426263988341,0.601892199455438,0,3.10419213877515,1.99267679560631,0.184369168541703,0.955719759148911,0,0,0,0,0,0,0,0,3.72161711728165,1.68808170616869,5.05188169979532,1.79394808957981,2.04682899626681,3.21707842287215,1.48418066444991,1.54209693802656,3.37367278094941,0.821271560138091,0,1.39452454151951,0,0.200506470303285,0,0.574072240823034,0.910455840033585,1.04899531967539,0,0.0770153371044148,0,0,0.211103257785751,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0.656029291399411,0.325378394664303,0.206082023295445,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0.322260734604821,0.290033387828457,0.170453254832202,0.178064071293475,0,0,0,0,1.85938219718914,8.18512101759664,0,0.308033580176089,0.532306030317022,0,0.18532421910392,0.143124886741991,0.372158369359667,0.949138274156178,1.33441135746677,0,1.28381696410176,0.318203247925937,0,1.07923474549989,0.54907405947211,0.824686816419805,0.606547444719948,1.58510321173008,0.421258456238981,0.48763373908959,0.974853958525138,0,0.136499911407986,0.989838023675989,2.26016233240486,0,0,1.75380354101505,0,0.655894752046633,0.202910376962704,0,0.281695602532241,0.430234056612155,0.392996164052485,0,0,3.79993743535795,8.23237232399755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0.890469640183247,0,0,0,0,0,0,0,4.3545542272653,0,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0.113942055847001,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,2.57979048707425,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,2.14882720709979,0,0,0,0,0,0,0,0.134366944973453,0.720599767084807,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,0.191915197319445,0,0,0,5.42999601753713,5.18532894720761,2.61269888087527,0,0,0.511164065356265,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0.235265819698172,0,0,1.49254802886874,1.8697064787778,3.88364103051829,0.757612021100357,3.0188148210309,1.77962244319307,1.37304041038154,1.51230923763239,0.777186002913902,0.591420599958536,0.63718706865481,0.899606224327209,1.24210365501008,4.14706207840855,11.4311937259938,1.04349012362347,2.10360652596106,5.33127297036314,0.813741466409323,0.545545977607678,2.14821114084977,4.17630383890644,8.75810955136955,0.400027764663154,1.03018711554838,2.69399591012735,0,0,0,0,0,0.694567422971502,0.489473409012935,1.25362188757041,0,0,1.59020231351293,0.38582807654183,0.337884881306145,0,0,0.303859956177382,0,0,0,0,0,0.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| |||
|short_description=p@chr5:121399703..121399718,- | |||
}} |
Latest revision as of 09:06, 30 July 2015
Short description: | p@chr5:121399703..121399718, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:121399703..121399718, - |
Coexpression cluster: | C421_Smooth_Fibroblast_epithelioid_hepatic_Sertoli_Ewing_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.12e-21 | 76 |
preadipocyte | 4.41e-14 | 12 |
skin fibroblast | 8.73e-13 | 23 |
multi fate stem cell | 1.14e-11 | 427 |
somatic stem cell | 3.20e-11 | 433 |
stem cell | 1.22e-10 | 441 |
mesenchymal cell | 1.93e-09 | 354 |
connective tissue cell | 6.26e-09 | 361 |
fibrocyte | 1.59e-07 | 3 |
tendon cell | 1.59e-07 | 3 |
motile cell | 3.63e-07 | 386 |
preadipocyte of the breast | 8.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
integument | 1.61e-12 | 46 |
integumental system | 1.61e-12 | 46 |
skin of body | 1.12e-11 | 41 |
connective tissue | 8.88e-10 | 371 |
omentum | 3.58e-08 | 6 |
peritoneum | 3.58e-08 | 6 |
abdominal cavity | 3.58e-08 | 6 |
visceral peritoneum | 3.58e-08 | 6 |
dense regular connective tissue | 1.59e-07 | 3 |
tendon | 1.59e-07 | 3 |
regular connective tissue | 1.59e-07 | 3 |
cavity lining | 1.84e-07 | 12 |
serous membrane | 1.84e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.27e-10 | 14 |
cell type benign neoplasm | 3.26e-07 | 3 |
leiomyoma | 3.26e-07 | 3 |
musculoskeletal system disease | 8.49e-07 | 5 |
myotonic disease | 8.49e-07 | 5 |
muscle tissue disease | 8.49e-07 | 5 |
myopathy | 8.49e-07 | 5 |
muscular disease | 8.49e-07 | 5 |
myotonic dystrophy | 8.49e-07 | 5 |