FFCP PHASE1:Hg19::chr5:120649811..120649848,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:120649811..120649848,+ | |||
|coexpression_cluster_id=C1695 | |coexpression_cluster_id=C1695 | ||
|description=CAGE_peak_at_chr5:120649811..120649848,+ | |description=CAGE_peak_at_chr5:120649811..120649848,+ | ||
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|ontology_enrichment_celltype_v019=CL:0002543;1.83e-98;6!CL:0000071;8.86e-34;18!CL:0002139;1.16e-25;24!CL:0000115;2.37e-15;36!CL:0002078;3.12e-11;45!CL:0000213;6.70e-10;58!CL:0000215;6.70e-10;58!CL:0000076;8.17e-09;63 | |ontology_enrichment_celltype_v019=CL:0002543;1.83e-98;6!CL:0000071;8.86e-34;18!CL:0002139;1.16e-25;24!CL:0000115;2.37e-15;36!CL:0002078;3.12e-11;45!CL:0000213;6.70e-10;58!CL:0000215;6.70e-10;58!CL:0000076;8.17e-09;63 | ||
|ontology_enrichment_celltype_v019_2=CL:0002543,1.83e-98,6;CL:0000071,8.86e-34,18;CL:0002546,8.86e-34,18;CL:0002139,1.16e-25,24;CL:0000115,1.62e-17,36;CL:0002078,3.03e-14,45;CL:0000213,2.67e-11,58;CL:0000215,2.67e-11,58;CL:0000076,1.74e-10,63 | |||
|ontology_enrichment_development_v019=CL:0002546;8.86e-34;18 | |ontology_enrichment_development_v019=CL:0002546;8.86e-34;18 | ||
|ontology_enrichment_disease=DOID:3030!1.25e-09!1;DOID:225!1.48e-09!1 | |ontology_enrichment_disease=DOID:3030!1.25e-09!1;DOID:225!1.48e-09!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr5:120649811..120649848,+ | |short_description=p@chr5:120649811..120649848,+ | ||
}} | }} |
Latest revision as of 09:06, 30 July 2015
Short description: | p@chr5:120649811..120649848, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:120649811..120649848, + |
Coexpression cluster: | C1695_Endothelial_Renal_Smooth_Hepatic_Natural_Eosinophils_mesodermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vein endothelial cell | 1.83e-98 | 6 |
blood vessel endothelial cell | 8.86e-34 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.86e-34 | 18 |
endothelial cell of vascular tree | 1.16e-25 | 24 |
endothelial cell | 1.62e-17 | 36 |
meso-epithelial cell | 3.03e-14 | 45 |
lining cell | 2.67e-11 | 58 |
barrier cell | 2.67e-11 | 58 |
squamous epithelial cell | 1.74e-10 | 63 |
Ontology term | p-value | n |
---|---|---|
vein | 3.75e-66 | 9 |
venous blood vessel | 3.75e-66 | 9 |
venous system | 3.75e-66 | 9 |
blood vessel endothelium | 8.86e-34 | 18 |
endothelium | 8.86e-34 | 18 |
cardiovascular system endothelium | 8.86e-34 | 18 |
simple squamous epithelium | 7.08e-28 | 22 |
squamous epithelium | 1.10e-24 | 25 |
epithelial tube open at both ends | 3.99e-11 | 59 |
blood vessel | 3.99e-11 | 59 |
blood vasculature | 3.99e-11 | 59 |
vascular cord | 3.99e-11 | 59 |
vessel | 8.58e-10 | 68 |
vasculature | 1.14e-08 | 78 |
vascular system | 1.14e-08 | 78 |
splanchnic layer of lateral plate mesoderm | 3.31e-08 | 83 |