FFCP PHASE1:Hg19::chr4:88902837..88902854,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:88902837..88902854,+ | |||
|coexpression_cluster_id=C455 | |coexpression_cluster_id=C455 | ||
|description=CAGE_peak_at_chr4:88902837..88902854,+ | |description=CAGE_peak_at_chr4:88902837..88902854,+ | ||
|id=chr4:88902837..88902854,+ | |id=chr4:88902837..88902854,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000235;5.45e-42;6!CL:0000319;3.11e-11;1!CL:0000840;1.63e-07;5!CL:0002149;1.63e-07;6!CL:0002255;1.63e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,5.25e-42,6;CL:0000319,1.78e-11,1;CL:0002149,1.63e-07,6;CL:0002255,1.63e-07,6;CL:0002194,1.73e-07,59;CL:0000576,1.73e-07,59;CL:0000040,1.73e-07,59;CL:0000559,1.73e-07,59;CL:0000840,2.05e-07,5;CL:0001029,2.05e-07,5;CL:0002009,3.18e-07,61 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.37e-11;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4468;1.05e-20;2!DOID:3030;3.11e-11;1!DOID:3001;1.63e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,6.37e-21,2;DOID:3030,1.78e-11,1;DOID:3001,1.63e-07,6 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002038;3.11e-11;1!UBERON:0009661;3.11e-11;1!UBERON:0002950;3.11e-11;1!UBERON:0001891;3.11e-11;1!UBERON:0002298;1.63e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,3.28e-11,1;UBERON:0009661,3.28e-11,1;UBERON:0002950,3.28e-11,1;UBERON:0001891,3.28e-11,1;UBERON:0009616,3.28e-11,1;UBERON:0010286,3.28e-11,1;UBERON:0002298,1.68e-07,6 | |||
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| ||
|short_description=p@chr4:88902837..88902854,+ | |short_description=p@chr4:88902837..88902854,+ | ||
}} | }} |
Latest revision as of 07:52, 30 July 2015
Short description: | p@chr4:88902837..88902854, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:88902837..88902854, + |
Coexpression cluster: | C455_kidney_Macrophage_clear_endometrial_Monocytederived_large_spinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 5.25e-42 | 6 |
mucus secreting cell | 1.78e-11 | 1 |
epithelial cell of uterus | 1.63e-07 | 6 |
stromal cell of endometrium | 1.63e-07 | 6 |
monopoietic cell | 1.73e-07 | 59 |
monocyte | 1.73e-07 | 59 |
monoblast | 1.73e-07 | 59 |
promonocyte | 1.73e-07 | 59 |
immature conventional dendritic cell | 2.05e-07 | 5 |
common dendritic progenitor | 2.05e-07 | 5 |
macrophage dendritic cell progenitor | 3.18e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 3.28e-11 | 1 |
midbrain nucleus | 3.28e-11 | 1 |
regional part of midbrain | 3.28e-11 | 1 |
midbrain | 3.28e-11 | 1 |
presumptive midbrain | 3.28e-11 | 1 |
midbrain neural tube | 3.28e-11 | 1 |
brainstem | 1.68e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 6.37e-21 | 2 |
mucinous adenocarcinoma | 1.78e-11 | 1 |
female reproductive endometrioid cancer | 1.63e-07 | 6 |