FFCP PHASE1:Hg19::chr4:69915736..69915762,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:69915736..69915762,- | |||
|coexpression_cluster_id=C182 | |coexpression_cluster_id=C182 | ||
|description=CAGE_peak_at_chr4:69915736..69915762,- | |description=CAGE_peak_at_chr4:69915736..69915762,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:1000497!2.71e-09!18;CL:0002518!2.71e-09!18 | |ontology_enrichment_celltype=CL:1000497!2.71e-09!18;CL:0002518!2.71e-09!18 | ||
|ontology_enrichment_celltype_v019=CL:0002149;3.26e-12;6!CL:0002255;3.26e-12;6!CL:0000945;8.95e-07;24 | |ontology_enrichment_celltype_v019=CL:0002149;3.26e-12;6!CL:0002255;3.26e-12;6!CL:0000945;8.95e-07;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0002149,3.26e-12,6;CL:0002255,3.26e-12,6;CL:0000945,8.95e-07,24;CL:0000826,8.95e-07,24 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.39e-15;10!UBERON:0007687;1.39e-15;10!UBERON:0007297;1.86e-09;2!UBERON:0003104;8.01e-09;31!UBERON:0005795;1.09e-07;10 | |ontology_enrichment_development_v019=UBERON:0003918;1.39e-15;10!UBERON:0007687;1.39e-15;10!UBERON:0007297;1.86e-09;2!UBERON:0003104;8.01e-09;31!UBERON:0005795;1.09e-07;10 | ||
|ontology_enrichment_disease=DOID:4468!4.06e-11!2;DOID:299!8.37e-09!25 | |ontology_enrichment_disease=DOID:4468!4.06e-11!2;DOID:299!8.37e-09!25 | ||
|ontology_enrichment_disease_v019=DOID:3001;3.26e-12;6!DOID:4468;1.86e-09;2 | |ontology_enrichment_disease_v019=DOID:3001;3.26e-12;6!DOID:4468;1.86e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3001,3.26e-12,6;DOID:4468,1.71e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000489!3.33e-16!32;UBERON:0005172!2.91e-14!55;UBERON:0005173!2.91e-14!55;UBERON:0006554!2.28e-13!44;UBERON:0002113!3.45e-13!27;UBERON:0003918!3.45e-13!27;UBERON:0005095!3.45e-13!27;UBERON:0007687!3.45e-13!27;UBERON:0001008!5.12e-13!45;UBERON:0002417!1.46e-12!61;UBERON:0000916!1.46e-12!61;UBERON:0001255!2.60e-10!2;UBERON:0001556!2.60e-10!2;UBERON:0003350!3.16e-09!5;UBERON:0000058!3.19e-08!26;UBERON:0005177!5.17e-08!107;UBERON:0006947!1.22e-07!3;UBERON:0004054!1.22e-07!3;UBERON:0003064!4.78e-07!37;UBERON:0006555!6.34e-07!17;UBERON:0005103!6.34e-07!17;UBERON:0000083!6.34e-07!17;UBERON:0009201!6.34e-07!17;UBERON:0004819!6.34e-07!17;UBERON:0006553!6.34e-07!17;UBERON:0003074!6.34e-07!17;UBERON:0003060!6.34e-07!17 | |ontology_enrichment_uberon=UBERON:0000489!3.33e-16!32;UBERON:0005172!2.91e-14!55;UBERON:0005173!2.91e-14!55;UBERON:0006554!2.28e-13!44;UBERON:0002113!3.45e-13!27;UBERON:0003918!3.45e-13!27;UBERON:0005095!3.45e-13!27;UBERON:0007687!3.45e-13!27;UBERON:0001008!5.12e-13!45;UBERON:0002417!1.46e-12!61;UBERON:0000916!1.46e-12!61;UBERON:0001255!2.60e-10!2;UBERON:0001556!2.60e-10!2;UBERON:0003350!3.16e-09!5;UBERON:0000058!3.19e-08!26;UBERON:0005177!5.17e-08!107;UBERON:0006947!1.22e-07!3;UBERON:0004054!1.22e-07!3;UBERON:0003064!4.78e-07!37;UBERON:0006555!6.34e-07!17;UBERON:0005103!6.34e-07!17;UBERON:0000083!6.34e-07!17;UBERON:0009201!6.34e-07!17;UBERON:0004819!6.34e-07!17;UBERON:0006553!6.34e-07!17;UBERON:0003074!6.34e-07!17;UBERON:0003060!6.34e-07!17 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;1.44e-17;1!UBERON:0004175;9.51e-08;21!UBERON:0002113;7.85e-07;24!UBERON:0011143;7.85e-07;24 | |ontology_enrichment_uberon_v019=UBERON:0001301;1.44e-17;1!UBERON:0004175;9.51e-08;21!UBERON:0002113;7.85e-07;24!UBERON:0011143;7.85e-07;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.70e-17,1;UBERON:0002113,1.77e-10,26;UBERON:0003918,1.77e-10,26;UBERON:0011143,1.77e-10,26;UBERON:0005095,1.77e-10,26;UBERON:0007687,1.77e-10,26;UBERON:0000489,7.80e-09,31;UBERON:0005172,1.08e-07,54;UBERON:0005173,1.08e-07,54;UBERON:0002417,6.37e-07,60;UBERON:0000916,6.37e-07,60 | |||
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|short_description=p@chr4:69915736..69915762,- | |short_description=p@chr4:69915736..69915762,- | ||
}} | }} |
Latest revision as of 06:13, 30 July 2015
Short description: | p@chr4:69915736..69915762, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:69915736..69915762, - |
Coexpression cluster: | C182_renal_mature_mesothelioma_lung_Mammary_Adipocyte_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 3.26e-12 | 6 |
stromal cell of endometrium | 3.26e-12 | 6 |
lymphocyte of B lineage | 8.95e-07 | 24 |
pro-B cell | 8.95e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
epididymis | 1.70e-17 | 1 |
kidney | 1.77e-10 | 26 |
kidney mesenchyme | 1.77e-10 | 26 |
upper urinary tract | 1.77e-10 | 26 |
kidney rudiment | 1.77e-10 | 26 |
kidney field | 1.77e-10 | 26 |
cavitated compound organ | 7.80e-09 | 31 |
abdomen element | 1.08e-07 | 54 |
abdominal segment element | 1.08e-07 | 54 |
abdominal segment of trunk | 6.37e-07 | 60 |
abdomen | 6.37e-07 | 60 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 3.26e-12 | 6 |
clear cell adenocarcinoma | 1.71e-09 | 2 |