FFCP PHASE1:Hg19::chr4:34096900..34096903,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:34096900..34096903,- | |||
|description=CAGE_peak_at_chr4:34096900..34096903,- | |description=CAGE_peak_at_chr4:34096900..34096903,- | ||
|id=chr4:34096900..34096903,- | |id=chr4:34096900..34096903,- | ||
|ontology_enrichment_celltype=CL:0002583!1.47e-08!2 | |ontology_enrichment_celltype=CL:0002583!1.47e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000946;3.25e-19;1!CL:0000313;3.25e-19;1!CL:0000786;3.25e-19;1!CL:0000047;2.72e-10;2!CL:0000159;2.72e-10;2!CL:1000415;2.72e-10;2!CL:0000182;4.57e-07;12 | |ontology_enrichment_celltype_v019=CL:0000946;3.25e-19;1!CL:0000313;3.25e-19;1!CL:0000786;3.25e-19;1!CL:0000047;2.72e-10;2!CL:0000159;2.72e-10;2!CL:1000415;2.72e-10;2!CL:0000182;4.57e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000313,2.71e-19,1;CL:0000946,4.69e-19,1;CL:0000786,4.69e-19,1;CL:0000980,4.69e-19,1;CL:1000415,2.07e-10,2;CL:0000159,2.49e-10,2;CL:0000785,3.27e-10,2;CL:0000955,3.27e-10,2;CL:0000818,3.27e-10,2;CL:0000954,3.27e-10,2;CL:0000816,3.27e-10,2;CL:0000817,3.16e-07,3;CL:0000182,4.71e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000954;2.72e-10;2 | |ontology_enrichment_development_v019=CL:0000954;2.72e-10;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2152;3.25e-19;1 | |ontology_enrichment_disease_v019=DOID:2152;3.25e-19;1 | ||
|ontology_enrichment_disease_v019_2=DOID:2152,2.71e-19,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;1.30e-19;1!UBERON:0009842;1.30e-19;1!UBERON:0003704;1.30e-19;1!UBERON:0001171;1.30e-19;1!UBERON:0001172;1.30e-19;1!UBERON:0004911;3.25e-19;1!UBERON:0002294;2.55e-11;7!UBERON:0001173;2.55e-11;7!UBERON:0004909;2.72e-10;2!UBERON:0002369;2.05e-07;3!UBERON:0001235;2.05e-07;3!UBERON:0006858;2.05e-07;3!UBERON:0001280;2.05e-07;3!UBERON:0004647;2.05e-07;3!UBERON:0002110;2.79e-07;3!UBERON:0002423;3.57e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0001282;1.30e-19;1!UBERON:0009842;1.30e-19;1!UBERON:0003704;1.30e-19;1!UBERON:0001171;1.30e-19;1!UBERON:0001172;1.30e-19;1!UBERON:0004911;3.25e-19;1!UBERON:0002294;2.55e-11;7!UBERON:0001173;2.55e-11;7!UBERON:0004909;2.72e-10;2!UBERON:0002369;2.05e-07;3!UBERON:0001235;2.05e-07;3!UBERON:0006858;2.05e-07;3!UBERON:0001280;2.05e-07;3!UBERON:0004647;2.05e-07;3!UBERON:0002110;2.79e-07;3!UBERON:0002423;3.57e-07;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,1.56e-19,1;UBERON:0009842,1.56e-19,1;UBERON:0003704,1.56e-19,1;UBERON:0001171,1.56e-19,1;UBERON:0001172,1.56e-19,1;UBERON:0004911,2.71e-19,1;UBERON:0004909,2.49e-10,2;UBERON:0002294,4.80e-09,9;UBERON:0001173,4.80e-09,9;UBERON:0004912,4.80e-09,9;UBERON:0002369,2.05e-07,3;UBERON:0001235,2.05e-07,3;UBERON:0006858,2.05e-07,3;UBERON:0001280,2.19e-07,3;UBERON:0004647,2.19e-07,3;UBERON:0005171,2.19e-07,3;UBERON:0002110,2.32e-07,3;UBERON:0006242,2.32e-07,3;UBERON:0009497,3.42e-07,25;UBERON:0000015,3.42e-07,25;UBERON:0002423,3.42e-07,25;UBERON:0006235,3.42e-07,25;UBERON:0004161,3.42e-07,25 | |||
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| ||
|short_description=p@chr4:34096900..34096903,- | |short_description=p@chr4:34096900..34096903,- | ||
}} | }} |
Latest revision as of 04:50, 30 July 2015
Short description: | p@chr4:34096900..34096903, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:34096900..34096903, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 2.71e-19 | 1 |
antibody secreting cell | 4.69e-19 | 1 |
plasma cell | 4.69e-19 | 1 |
plasmablast | 4.69e-19 | 1 |
epithelial cell of gall bladder | 2.07e-10 | 2 |
seromucus secreting cell | 2.49e-10 | 2 |
mature B cell | 3.27e-10 | 2 |
pre-B-II cell | 3.27e-10 | 2 |
transitional stage B cell | 3.27e-10 | 2 |
small pre-B-II cell | 3.27e-10 | 2 |
immature B cell | 3.27e-10 | 2 |
precursor B cell | 3.16e-07 | 3 |
hepatocyte | 4.71e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 1.56e-19 | 1 |
acinus | 1.56e-19 | 1 |
intrahepatic bile duct | 1.56e-19 | 1 |
portal lobule | 1.56e-19 | 1 |
hepatic acinus | 1.56e-19 | 1 |
epithelium of female gonad | 2.71e-19 | 1 |
epithelium of gonad | 2.49e-10 | 2 |
biliary system | 4.80e-09 | 9 |
biliary tree | 4.80e-09 | 9 |
biliary bud | 4.80e-09 | 9 |
adrenal gland | 2.05e-07 | 3 |
adrenal cortex | 2.05e-07 | 3 |
adrenal/interrenal gland | 2.05e-07 | 3 |
liver parenchyma | 2.19e-07 | 3 |
liver lobule | 2.19e-07 | 3 |
hepatic duct | 2.19e-07 | 3 |
gallbladder | 2.32e-07 | 3 |
gall bladder primordium | 2.32e-07 | 3 |
epithelium of foregut-midgut junction | 3.42e-07 | 25 |
anatomical boundary | 3.42e-07 | 25 |
hepatobiliary system | 3.42e-07 | 25 |
foregut-midgut junction | 3.42e-07 | 25 |
septum transversum | 3.42e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 2.71e-19 | 1 |