FFCP PHASE1:Hg19::chr4:26175826..26175854,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:26175826..26175854,- | |||
|coexpression_cluster_id=C21 | |coexpression_cluster_id=C21 | ||
|description=CAGE_peak_at_chr4:26175826..26175854,- | |description=CAGE_peak_at_chr4:26175826..26175854,- | ||
|id=chr4:26175826..26175854,- | |id=chr4:26175826..26175854,- | ||
|ontology_enrichment_celltype=CL:0000080!8.79e-09!6;CL:0002619!1.17e-07!3 | |ontology_enrichment_celltype=CL:0000080!8.79e-09!6;CL:0002619!1.17e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000771;2.90e-12;2!CL:0000081;5.10e-09;11!CL:0000322;1.30e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,2.59e-12,2;CL:0000081,5.00e-09,11;CL:0000322,1.30e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!9.53e-09!15;UBERON:0000179!9.53e-09!15;UBERON:0000463!9.53e-09!15;UBERON:0002331!1.15e-08!10;UBERON:0000358!1.15e-08!10;UBERON:0000307!1.15e-08!10;UBERON:0000091!1.15e-08!10;UBERON:0000087!1.15e-08!10;UBERON:0007806!1.15e-08!10;UBERON:0008780!1.15e-08!10;UBERON:0005728!1.15e-08!10;UBERON:0002106!3.35e-07!3;UBERON:0004854!3.35e-07!3;UBERON:0009034!3.35e-07!3;UBERON:0002095!3.35e-07!3;UBERON:0004782!3.35e-07!3;UBERON:0003281!3.35e-07!3;UBERON:0009664!3.35e-07!3;UBERON:0002296!3.35e-07!3;UBERON:0005602!3.35e-07!3;UBERON:0001179!3.35e-07!3;UBERON:0006293!3.35e-07!3 | |ontology_enrichment_uberon=UBERON:0000178!9.53e-09!15;UBERON:0000179!9.53e-09!15;UBERON:0000463!9.53e-09!15;UBERON:0002331!1.15e-08!10;UBERON:0000358!1.15e-08!10;UBERON:0000307!1.15e-08!10;UBERON:0000091!1.15e-08!10;UBERON:0000087!1.15e-08!10;UBERON:0007806!1.15e-08!10;UBERON:0008780!1.15e-08!10;UBERON:0005728!1.15e-08!10;UBERON:0002106!3.35e-07!3;UBERON:0004854!3.35e-07!3;UBERON:0009034!3.35e-07!3;UBERON:0002095!3.35e-07!3;UBERON:0004782!3.35e-07!3;UBERON:0003281!3.35e-07!3;UBERON:0009664!3.35e-07!3;UBERON:0002296!3.35e-07!3;UBERON:0005602!3.35e-07!3;UBERON:0001179!3.35e-07!3;UBERON:0006293!3.35e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;9.82e-21;10!UBERON:0000178;4.52e-14;15!UBERON:0000179;4.52e-14;15!UBERON:0000463;4.52e-14;15!UBERON:0000478;4.86e-09;24!UBERON:0004821;1.30e-08;3!UBERON:0007499;1.30e-08;3!UBERON:0003215;1.30e-08;3!UBERON:0010368;1.30e-08;3!UBERON:0009911;1.30e-08;3!UBERON:0002299;1.30e-08;3!UBERON:0006524;1.30e-08;3!UBERON:0008874;1.30e-08;3!UBERON:0002169;1.30e-08;3!UBERON:0004894;1.30e-08;3!UBERON:0002390;5.34e-07;32!UBERON:0009856;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,9.82e-21,10;UBERON:0000358,9.82e-21,10;UBERON:0000307,9.82e-21,10;UBERON:0000091,9.82e-21,10;UBERON:0000087,9.82e-21,10;UBERON:0007010,9.82e-21,10;UBERON:0007806,9.82e-21,10;UBERON:0008780,9.82e-21,10;UBERON:0005728,9.82e-21,10;UBERON:0000178,4.52e-14,15;UBERON:0000179,4.52e-14,15;UBERON:0000463,4.52e-14,15;UBERON:0000478,4.86e-09,24;UBERON:0004821,1.30e-08,3;UBERON:0003215,1.30e-08,3;UBERON:0010368,1.30e-08,3;UBERON:0009911,1.30e-08,3;UBERON:0002299,1.30e-08,3;UBERON:0006524,1.30e-08,3;UBERON:0008874,1.30e-08,3;UBERON:0002169,1.30e-08,3;UBERON:0004894,1.30e-08,3 | |||
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|short_description=p@chr4:26175826..26175854,- | |short_description=p@chr4:26175826..26175854,- | ||
}} | }} |
Latest revision as of 04:35, 30 July 2015
Short description: | p@chr4:26175826..26175854, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:26175826..26175854, - |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 2.59e-12 | 2 |
blood cell | 5.00e-09 | 11 |
pneumocyte | 1.30e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 9.82e-21 | 10 |
blastocyst | 9.82e-21 | 10 |
blastula | 9.82e-21 | 10 |
bilaminar disc | 9.82e-21 | 10 |
inner cell mass | 9.82e-21 | 10 |
cleaving embryo | 9.82e-21 | 10 |
connecting stalk | 9.82e-21 | 10 |
inner cell mass derived epiblast | 9.82e-21 | 10 |
extraembryonic mesoderm | 9.82e-21 | 10 |
blood | 4.52e-14 | 15 |
haemolymphatic fluid | 4.52e-14 | 15 |
organism substance | 4.52e-14 | 15 |
extraembryonic structure | 4.86e-09 | 24 |
pulmonary alveolus epithelium | 1.30e-08 | 3 |
alveolus | 1.30e-08 | 3 |
pulmonary lobule | 1.30e-08 | 3 |
lobule | 1.30e-08 | 3 |
alveolus of lung | 1.30e-08 | 3 |
alveolar system | 1.30e-08 | 3 |
pulmonary acinus | 1.30e-08 | 3 |
alveolar sac | 1.30e-08 | 3 |
alveolar wall | 1.30e-08 | 3 |