FFCP PHASE1:Hg19::chr4:189864018..189864037,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:189864018..189864037,+ | |||
|description=CAGE_peak_at_chr4:189864018..189864037,+ | |||
|id=chr4:189864018..189864037,+ | |||
|ontology_enrichment_celltype=CL:0000864!6.26e-12!1;CL:0000091!6.26e-12!1;CL:0000319!1.19e-11!1;CL:0000946!1.63e-11!1;CL:0000786!1.63e-11!1;CL:0000980!1.63e-11!1;CL:0002149!5.36e-08!6;CL:0002255!5.36e-08!6;CL:0000054!9.44e-07!2;CL:0000137!9.44e-07!2;CL:0000092!9.44e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000054;5.56e-26;2!CL:0000137;5.56e-26;2!CL:0000092;5.56e-26;2!CL:0002092;8.54e-21;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,5.56e-26,2;CL:0000137,5.56e-26,2;CL:0000092,5.56e-26,2;CL:0002092,8.54e-21,10 | |||
|ontology_enrichment_development_v019=UBERON:0007123;3.60e-11;5 | |||
|ontology_enrichment_disease=DOID:3350!4.86e-22!2;DOID:0060085!2.93e-12!1;DOID:3165!2.93e-12!1;DOID:0060121!2.93e-12!1;DOID:2438!2.93e-12!1;DOID:4418!2.93e-12!1;DOID:4960!3.27e-12!1;DOID:0070004!3.27e-12!1;DOID:3571!6.26e-12!1;DOID:6193!6.97e-12!1;DOID:2355!1.07e-11!1;DOID:3030!1.19e-11!1;DOID:0060058!6.16e-10!10;DOID:3001!5.36e-08!6;DOID:200!9.44e-07!2;DOID:4305!9.44e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:0060085;2.42e-50;1!DOID:3165;2.42e-50;1!DOID:0060121;2.42e-50;1!DOID:2438;2.42e-50;1!DOID:4418;2.42e-50;1!DOID:4960;3.99e-50;1!DOID:0070004;3.99e-50;1!DOID:200;5.56e-26;2!DOID:4305;5.56e-26;2!DOID:4556;6.76e-18;3!DOID:0060072;1.00e-13;4!DOID:3908;2.66e-11;5!DOID:201;1.32e-09;6!DOID:0060100;1.32e-09;6!DOID:3905;7.48e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,2.42e-50,1;DOID:3165,2.42e-50,1;DOID:0060121,2.42e-50,1;DOID:2438,2.42e-50,1;DOID:4418,2.42e-50,1;DOID:4960,3.99e-50,1;DOID:0070004,3.99e-50,1;DOID:200,5.56e-26,2;DOID:4305,5.56e-26,2;DOID:4556,6.76e-18,3;DOID:0060072,1.00e-13,4;DOID:3908,2.66e-11,5;DOID:201,1.32e-09,6;DOID:0060100,1.32e-09,6;DOID:3905,7.48e-07,9 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002371;1.57e-17;12!UBERON:0000014;1.00e-13;4!UBERON:0001474;4.55e-12;18!UBERON:0002046;3.60e-11;5!UBERON:0004765;1.11e-08;26!UBERON:0002405;2.14e-08;27!UBERON:0002390;3.58e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,1.00e-13,4;UBERON:0002046,3.60e-11,5;UBERON:0004117,3.60e-11,5;UBERON:0007689,3.60e-11,5;UBERON:0007123,3.60e-11,5;UBERON:0003091,3.60e-11,5 | |||
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|short_description=p@chr4:189864018..189864037,+ | |||
}} | }} |
Latest revision as of 04:13, 30 July 2015
Short description: | p@chr4:189864018..189864037, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:189864018..189864037, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 5.56e-26 | 2 |
osteocyte | 5.56e-26 | 2 |
osteoclast | 5.56e-26 | 2 |
bone marrow cell | 8.54e-21 | 10 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 1.00e-13 | 4 |
thyroid gland | 3.60e-11 | 5 |
pharyngeal pouch | 3.60e-11 | 5 |
thyroid diverticulum | 3.60e-11 | 5 |
pharyngeal pouch 2 | 3.60e-11 | 5 |
thyroid primordium | 3.60e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 2.42e-50 | 1 |
skin benign neoplasm | 2.42e-50 | 1 |
integumentary system benign neoplasm | 2.42e-50 | 1 |
dermis tumor | 2.42e-50 | 1 |
cutaneous fibrous histiocytoma | 2.42e-50 | 1 |
bone marrow cancer | 3.99e-50 | 1 |
myeloma | 3.99e-50 | 1 |
giant cell tumor | 5.56e-26 | 2 |
bone giant cell tumor | 5.56e-26 | 2 |
lung large cell carcinoma | 6.76e-18 | 3 |
benign neoplasm | 1.00e-13 | 4 |
non-small cell lung carcinoma | 2.66e-11 | 5 |
connective tissue cancer | 1.32e-09 | 6 |
musculoskeletal system cancer | 1.32e-09 | 6 |
lung carcinoma | 7.48e-07 | 9 |