FFCP PHASE1:Hg19::chr4:180401309..180401311,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr4:180401309..180401311,+ to FFCP PHASE1:Hg19::chr4:180401309..180401311,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:180401309..180401311,+ | |||
|coexpression_cluster_id=C583 | |||
|description=CAGE_peak_at_chr4:180401309..180401311,+ | |||
|id=chr4:180401309..180401311,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.17e-145!42;CL:0000860!8.77e-135!45;CL:0002194!1.40e-104!63;CL:0000576!1.40e-104!63;CL:0000040!1.40e-104!63;CL:0000559!1.40e-104!63;CL:0002009!3.27e-101!65;CL:0000839!1.28e-93!70;CL:0000557!3.16e-92!71;CL:0000766!1.02e-90!76;CL:0000763!1.10e-59!112;CL:0000049!1.10e-59!112;CL:0002087!9.49e-56!119;CL:0002031!2.78e-50!124;CL:0000738!3.40e-49!140;CL:0000037!7.86e-39!172;CL:0000566!7.86e-39!172;CL:0002032!1.87e-38!165;CL:0000837!1.87e-38!165;CL:0000988!2.47e-36!182;CL:0000134!4.50e-15!358;CL:0002320!1.20e-14!365;CL:0002393!4.89e-14!9;CL:0002397!4.89e-14!9;CL:0000219!3.80e-13!390;CL:0000048!2.39e-11!430;CL:0000723!4.32e-11!436;CL:0000034!9.25e-11!444;CL:0000875!1.23e-07!3;CL:0002396!1.23e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.25e-108;33!CL:0002057;1.25e-108;33!CL:0000473;8.12e-88;39!CL:0000234;8.12e-88;39!CL:0000576;1.95e-67;48!CL:0000766;3.47e-40;69!CL:0000763;9.10e-22;100!CL:0002087;1.99e-13;104!CL:0000738;3.59e-12;136!CL:0000988;4.35e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.39e-116,48;CL:0000234,1.39e-116,48;CL:0000860,4.57e-116,42;CL:0002057,4.57e-116,42;CL:0002194,2.54e-92,59;CL:0000576,2.54e-92,59;CL:0000040,2.54e-92,59;CL:0000559,2.54e-92,59;CL:0002009,3.43e-89,61;CL:0000839,3.53e-82,66;CL:0000557,6.71e-81,67;CL:0000766,3.05e-80,72;CL:0000763,3.88e-52,108;CL:0000049,3.88e-52,108;CL:0002087,2.06e-45,115;CL:0002031,2.48e-43,120;CL:0000738,1.79e-40,136;CL:0002032,1.86e-33,161;CL:0000837,1.86e-33,161;CL:0000037,7.30e-32,168;CL:0000988,5.36e-30,177;CL:0000134,1.89e-12,354;CL:0002320,4.17e-12,361;CL:0000219,6.81e-11,386;CL:0000048,2.09e-09,427;CL:0000723,3.35e-09,433;CL:0000034,6.18e-09,441;CL:0002393,5.11e-07,9;CL:0002397,5.11e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.14e-89;42!CL:0000049;5.60e-19;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.05e-81!80;UBERON:0001474!3.51e-75!86;UBERON:0002390!4.60e-66!102;UBERON:0003061!4.60e-66!102;UBERON:0004765!3.85e-63!101;UBERON:0001434!3.85e-63!101;UBERON:0002193!1.27e-59!112;UBERON:0002405!1.04e-54!115;UBERON:0002204!1.14e-35!167;UBERON:0003081!9.23e-28!216;UBERON:0002384!4.56e-14!375;UBERON:0000926!1.00e-09!448;UBERON:0004120!1.00e-09!448;UBERON:0006603!1.00e-09!448;UBERON:0000062!8.06e-07!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.98e-71,76;UBERON:0001474,2.07e-65,82;UBERON:0004765,3.11e-59,90;UBERON:0002405,3.46e-57,93;UBERON:0002390,4.72e-54,98;UBERON:0003061,4.72e-54,98;UBERON:0001434,6.93e-53,100;UBERON:0002193,1.21e-48,108;UBERON:0002204,8.20e-30,167;UBERON:0003081,1.18e-23,203;UBERON:0000926,1.98e-13,315;UBERON:0004120,1.98e-13,315;UBERON:0006603,1.98e-13,315;UBERON:0002384,1.23e-11,371 | |||
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|short_description=p@chr4:180401309..180401311,+ | |||
}} | }} |
Latest revision as of 03:42, 30 July 2015
Short description: | p@chr4:180401309..180401311, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:180401309..180401311, + |
Coexpression cluster: | C583_CD14_Monocytederived_Basophils_CD14CD16_immature_Mast_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.39e-116 | 48 |
phagocyte | 1.39e-116 | 48 |
classical monocyte | 4.57e-116 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.57e-116 | 42 |
monopoietic cell | 2.54e-92 | 59 |
monocyte | 2.54e-92 | 59 |
monoblast | 2.54e-92 | 59 |
promonocyte | 2.54e-92 | 59 |
macrophage dendritic cell progenitor | 3.43e-89 | 61 |
myeloid lineage restricted progenitor cell | 3.53e-82 | 66 |
granulocyte monocyte progenitor cell | 6.71e-81 | 67 |
myeloid leukocyte | 3.05e-80 | 72 |
myeloid cell | 3.88e-52 | 108 |
common myeloid progenitor | 3.88e-52 | 108 |
nongranular leukocyte | 2.06e-45 | 115 |
hematopoietic lineage restricted progenitor cell | 2.48e-43 | 120 |
leukocyte | 1.79e-40 | 136 |
hematopoietic oligopotent progenitor cell | 1.86e-33 | 161 |
hematopoietic multipotent progenitor cell | 1.86e-33 | 161 |
hematopoietic stem cell | 7.30e-32 | 168 |
hematopoietic cell | 5.36e-30 | 177 |
mesenchymal cell | 1.89e-12 | 354 |
connective tissue cell | 4.17e-12 | 361 |
motile cell | 6.81e-11 | 386 |
multi fate stem cell | 2.09e-09 | 427 |
somatic stem cell | 3.35e-09 | 433 |
stem cell | 6.18e-09 | 441 |
intermediate monocyte | 5.11e-07 | 9 |
CD14-positive, CD16-positive monocyte | 5.11e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.98e-71 | 76 |
bone element | 2.07e-65 | 82 |
skeletal element | 3.11e-59 | 90 |
immune system | 3.46e-57 | 93 |
hematopoietic system | 4.72e-54 | 98 |
blood island | 4.72e-54 | 98 |
skeletal system | 6.93e-53 | 100 |
hemolymphoid system | 1.21e-48 | 108 |
musculoskeletal system | 8.20e-30 | 167 |
lateral plate mesoderm | 1.18e-23 | 203 |
mesoderm | 1.98e-13 | 315 |
mesoderm-derived structure | 1.98e-13 | 315 |
presumptive mesoderm | 1.98e-13 | 315 |
connective tissue | 1.23e-11 | 371 |