FFCP PHASE1:Hg19::chr4:177796841..177796851,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENST00000508790_5end | |||
|cluster_id=chr4:177796841..177796851,+ | |||
|coexpression_cluster_id=C510 | |||
|description=CAGE_peak_1_at_ENST00000508790_5end | |||
|id=chr4:177796841..177796851,+ | |||
|ontology_enrichment_celltype=CL:0002573!3.18e-16!2;CL:0002322!1.16e-09!5;CL:0002620!6.72e-08!23;CL:0000054!4.56e-07!2;CL:0000137!4.56e-07!2;CL:0000092!4.56e-07!2;CL:0000055!4.71e-07!180;CL:0002535!6.80e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002573;1.52e-87;2!CL:0000054;3.61e-34;2!CL:0000137;3.61e-34;2!CL:0000092;3.61e-34;2!CL:0000243;1.37e-16;15!CL:0000125;1.37e-16;15!CL:0000095;5.66e-15;17!CL:0002319;6.90e-11;25!CL:0002092;5.73e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002573,1.52e-87,2;CL:0000054,3.61e-34,2;CL:0000137,3.61e-34,2;CL:0000092,3.61e-34,2;CL:0000243,1.37e-16,15;CL:0000125,1.37e-16,15;CL:0000030,1.37e-16,15;CL:0000339,1.37e-16,15;CL:0000095,5.66e-15,17;CL:0000123,5.66e-15,17;CL:0002319,6.90e-11,25;CL:0002092,5.73e-08,10;CL:0000062,2.32e-07,11;CL:0000375,2.32e-07,11;CL:0000335,2.32e-07,11;CL:0000333,3.05e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000339;1.37e-16;15!CL:0000335;2.32e-07;11 | |||
|ontology_enrichment_disease=DOID:0060085!7.03e-13!1;DOID:3165!7.03e-13!1;DOID:0060121!7.03e-13!1;DOID:2438!7.03e-13!1;DOID:4418!7.03e-13!1;DOID:200!4.56e-07!2;DOID:4305!4.56e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:0060085;1.23e-66;1!DOID:3165;1.23e-66;1!DOID:0060121;1.23e-66;1!DOID:2438;1.23e-66;1!DOID:4418;1.23e-66;1!DOID:200;3.61e-34;2!DOID:4305;3.61e-34;2!DOID:0060072;7.35e-18;4!DOID:201;2.19e-12;6!DOID:0060100;2.19e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.23e-66,1;DOID:3165,1.23e-66,1;DOID:0060121,1.23e-66,1;DOID:2438,1.23e-66,1;DOID:4418,1.23e-66,1;DOID:200,3.61e-34,2;DOID:4305,3.61e-34,2;DOID:0060072,7.35e-18,4;DOID:201,2.19e-12,6;DOID:0060100,2.19e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0006955!6.80e-07!2;UBERON:0004801!6.80e-07!2;UBERON:0002097!7.44e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0000010;3.59e-30;8!UBERON:0000014;7.35e-18;4!UBERON:0002371;7.48e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,3.59e-30,8;UBERON:0000014,7.35e-18,4 | |||
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|short_description=p1@ENST00000508790 | |||
}} | }} |
Latest revision as of 03:40, 30 July 2015
Short description: | p1@ENST00000508790 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000508790_5end |
Coexpression cluster: | C510_fibrous_mesothelioma_cholangiocellular_liposarcoma_Fibroblast_mesenchymal_leukemia |
Association with transcript: | -4bp_to_ENST00000508790_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 1.52e-87 | 2 |
bone matrix secreting cell | 3.61e-34 | 2 |
osteocyte | 3.61e-34 | 2 |
osteoclast | 3.61e-34 | 2 |
glial cell (sensu Vertebrata) | 1.37e-16 | 15 |
glial cell | 1.37e-16 | 15 |
glioblast | 1.37e-16 | 15 |
glioblast (sensu Vertebrata) | 1.37e-16 | 15 |
neuron associated cell | 5.66e-15 | 17 |
neuron associated cell (sensu Vertebrata) | 5.66e-15 | 17 |
neural cell | 6.90e-11 | 25 |
bone marrow cell | 5.73e-08 | 10 |
osteoblast | 2.32e-07 | 11 |
osteoprogenitor cell | 2.32e-07 | 11 |
mesenchyme condensation cell | 2.32e-07 | 11 |
migratory neural crest cell | 3.05e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 3.59e-30 | 8 |
zone of skin | 7.35e-18 | 4 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.23e-66 | 1 |
skin benign neoplasm | 1.23e-66 | 1 |
integumentary system benign neoplasm | 1.23e-66 | 1 |
dermis tumor | 1.23e-66 | 1 |
cutaneous fibrous histiocytoma | 1.23e-66 | 1 |
giant cell tumor | 3.61e-34 | 2 |
bone giant cell tumor | 3.61e-34 | 2 |
benign neoplasm | 7.35e-18 | 4 |
connective tissue cancer | 2.19e-12 | 6 |
musculoskeletal system cancer | 2.19e-12 | 6 |