FFCP PHASE1:Hg19::chr4:170833863..170833889,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:170833863..170833889,+ | |||
|coexpression_cluster_id=C39 | |coexpression_cluster_id=C39 | ||
|description=CAGE_peak_at_chr4:170833863..170833889,+ | |description=CAGE_peak_at_chr4:170833863..170833889,+ | ||
|id=chr4:170833863..170833889,+ | |id=chr4:170833863..170833889,+ | ||
|ontology_enrichment_celltype=CL:0002586!6.56e-13!3;CL:0000149!6.54e-10!4;CL:0002149!3.55e-07!6;CL:0002255!3.55e-07!6 | |ontology_enrichment_celltype=CL:0002586!6.56e-13!3;CL:0000149!6.54e-10!4;CL:0002149!3.55e-07!6;CL:0002255!3.55e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002149;3.15e-14;6!CL:0002255;3.15e-14;6!CL:0002541;6.34e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,2.85e-14,6;CL:0002255,2.85e-14,6;CL:0002541,6.34e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;6.98e-21;1!UBERON:0005795;1.94e-18;10!UBERON:0003918;2.19e-18;10!UBERON:0007687;2.19e-18;10!UBERON:0007297;1.82e-11;2 | |||
|ontology_enrichment_disease=DOID:5662!2.28e-10!1;DOID:3001!3.55e-07!6 | |ontology_enrichment_disease=DOID:5662!2.28e-10!1;DOID:3001!3.55e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:3001;3.15e-14;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,2.85e-14,6 | |||
|ontology_enrichment_uberon=UBERON:0003135!7.50e-14!11;UBERON:0006947!1.25e-13!3;UBERON:0004054!1.25e-13!3;UBERON:0004175!5.71e-13!25;UBERON:0001781!6.56e-13!3;UBERON:0001782!6.56e-13!3;UBERON:0005424!6.56e-13!3;UBERON:0003124!2.32e-12!7;UBERON:0005156!2.15e-11!59;UBERON:0000990!2.15e-11!59;UBERON:0003133!2.30e-11!48;UBERON:0001301!6.73e-11!1;UBERON:0001000!8.14e-11!1;UBERON:0005352!8.14e-11!1;UBERON:0005904!1.90e-10!4;UBERON:0003101!2.13e-10!22;UBERON:0000079!2.13e-10!22;UBERON:0001987!4.98e-10!4;UBERON:0004340!4.98e-10!4;UBERON:0000489!6.73e-10!32;UBERON:0006554!1.95e-09!44;UBERON:0001008!3.28e-09!45;UBERON:0002113!1.87e-08!27;UBERON:0003918!1.87e-08!27;UBERON:0005095!1.87e-08!27;UBERON:0007687!1.87e-08!27;UBERON:0000966!4.22e-08!5;UBERON:0005388!4.22e-08!5;UBERON:0001802!4.22e-08!5;UBERON:0000995!3.16e-07!21;UBERON:0005795!6.66e-07!22;UBERON:0003975!6.66e-07!22 | |ontology_enrichment_uberon=UBERON:0003135!7.50e-14!11;UBERON:0006947!1.25e-13!3;UBERON:0004054!1.25e-13!3;UBERON:0004175!5.71e-13!25;UBERON:0001781!6.56e-13!3;UBERON:0001782!6.56e-13!3;UBERON:0005424!6.56e-13!3;UBERON:0003124!2.32e-12!7;UBERON:0005156!2.15e-11!59;UBERON:0000990!2.15e-11!59;UBERON:0003133!2.30e-11!48;UBERON:0001301!6.73e-11!1;UBERON:0001000!8.14e-11!1;UBERON:0005352!8.14e-11!1;UBERON:0005904!1.90e-10!4;UBERON:0003101!2.13e-10!22;UBERON:0000079!2.13e-10!22;UBERON:0001987!4.98e-10!4;UBERON:0004340!4.98e-10!4;UBERON:0000489!6.73e-10!32;UBERON:0006554!1.95e-09!44;UBERON:0001008!3.28e-09!45;UBERON:0002113!1.87e-08!27;UBERON:0003918!1.87e-08!27;UBERON:0005095!1.87e-08!27;UBERON:0007687!1.87e-08!27;UBERON:0000966!4.22e-08!5;UBERON:0005388!4.22e-08!5;UBERON:0001802!4.22e-08!5;UBERON:0000995!3.16e-07!21;UBERON:0005795!6.66e-07!22;UBERON:0003975!6.66e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;9.30e-28;3!UBERON:0004054;9.30e-28;3!UBERON:0001301;1.53e-21;1!UBERON:0001000;2.30e-21;1!UBERON:0005352;2.30e-21;1!UBERON:0005904;4.23e-21;4!UBERON:0003135;4.59e-17;11!UBERON:0004175;1.29e-15;21!UBERON:0000058;4.94e-09;10!UBERON:0003101;7.41e-09;22!UBERON:0000079;7.41e-09;22!UBERON:0005156;1.95e-08;59!UBERON:0000990;1.95e-08;59!UBERON:0002113;4.86e-08;24!UBERON:0011143;4.86e-08;24!UBERON:0003124;6.34e-08;3!UBERON:0000920;6.34e-08;3!UBERON:0003133;2.58e-07;44!UBERON:0000489;9.50e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,9.30e-28,3;UBERON:0004054,9.30e-28,3;UBERON:0001301,1.53e-21,1;UBERON:0001000,2.30e-21,1;UBERON:0005352,2.30e-21,1;UBERON:0005904,4.23e-21,4;UBERON:0004175,4.60e-20,25;UBERON:0003135,4.59e-17,11;UBERON:0003133,6.85e-15,48;UBERON:0002113,1.45e-12,26;UBERON:0003918,1.45e-12,26;UBERON:0011143,1.45e-12,26;UBERON:0005095,1.45e-12,26;UBERON:0007687,1.45e-12,26;UBERON:0003124,2.98e-12,7;UBERON:0005156,4.18e-12,59;UBERON:0000990,4.18e-12,59;UBERON:0006554,1.19e-10,47;UBERON:0000489,1.34e-10,31;UBERON:0001008,1.97e-10,48;UBERON:0000995,3.75e-09,21;UBERON:0003101,7.41e-09,22;UBERON:0000079,7.41e-09,22;UBERON:0005795,9.18e-09,22;UBERON:0003975,9.18e-09,22;UBERON:0000920,6.34e-08,3 | |||
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|short_description=p@chr4:170833863..170833889,+ | |short_description=p@chr4:170833863..170833889,+ | ||
}} | }} |
Latest revision as of 03:18, 30 July 2015
Short description: | p@chr4:170833863..170833889, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:170833863..170833889, + |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 2.85e-14 | 6 |
stromal cell of endometrium | 2.85e-14 | 6 |
chorionic membrane mesenchymal stem cell | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 9.30e-28 | 3 |
internal male genitalia | 9.30e-28 | 3 |
epididymis | 1.53e-21 | 1 |
vas deferens | 2.30e-21 | 1 |
spermatic cord | 2.30e-21 | 1 |
duct of male reproductive system | 4.23e-21 | 4 |
internal genitalia | 4.60e-20 | 25 |
male reproductive organ | 4.59e-17 | 11 |
reproductive organ | 6.85e-15 | 48 |
kidney | 1.45e-12 | 26 |
kidney mesenchyme | 1.45e-12 | 26 |
upper urinary tract | 1.45e-12 | 26 |
kidney rudiment | 1.45e-12 | 26 |
kidney field | 1.45e-12 | 26 |
chorion | 2.98e-12 | 7 |
reproductive structure | 4.18e-12 | 59 |
reproductive system | 4.18e-12 | 59 |
urinary system structure | 1.19e-10 | 47 |
cavitated compound organ | 1.34e-10 | 31 |
renal system | 1.97e-10 | 48 |
uterus | 3.75e-09 | 21 |
male organism | 7.41e-09 | 22 |
male reproductive system | 7.41e-09 | 22 |
embryonic uterus | 9.18e-09 | 22 |
internal female genitalia | 9.18e-09 | 22 |
egg chorion | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 2.85e-14 | 6 |