FFCP PHASE1:Hg19::chr4:161747552..161747607,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:161747552..161747607,- | |||
|coexpression_cluster_id=C2745 | |||
|description=CAGE_peak_at_chr4:161747552..161747607,- | |description=CAGE_peak_at_chr4:161747552..161747607,- | ||
|id=chr4:161747552..161747607,- | |id=chr4:161747552..161747607,- | ||
|ontology_enrichment_celltype=CL:0000313!1.11e-07!1;CL:0000946!1.44e-07!1;CL:0000786!1.44e-07!1;CL:0000980!1.44e-07!1 | |ontology_enrichment_celltype=CL:0000313!1.11e-07!1;CL:0000946!1.44e-07!1;CL:0000786!1.44e-07!1;CL:0000980!1.44e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:1000415;5.55e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,5.37e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!8.43e-15!2;DOID:2531!4.95e-11!51;DOID:0060083!4.95e-11!51;DOID:1240!1.52e-09!39;DOID:0050686!6.66e-09!137;DOID:3111!3.55e-08!1;DOID:3603!3.55e-08!1;DOID:162!4.08e-08!235;DOID:4960!5.33e-08!1;DOID:0070004!5.33e-08!1;DOID:14566!7.34e-08!239;DOID:12603!9.72e-08!1;DOID:2152!1.11e-07!1;DOID:0050619!1.26e-07!1;DOID:1357!1.26e-07!1;DOID:8692!4.86e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:3493;4.12e-28;2!DOID:3111;8.17e-15;1!DOID:3603;8.17e-15;1!DOID:4960;1.84e-14;1!DOID:0070004;1.84e-14;1!DOID:1325;1.37e-08;7!DOID:3904;1.37e-08;7!DOID:3910;3.56e-08;2!DOID:3905;7.21e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,4.13e-28,2;DOID:3111,8.17e-15,1;DOID:3603,8.17e-15,1;DOID:4960,1.84e-14,1;DOID:0070004,1.84e-14,1;DOID:162,4.21e-11,235;DOID:14566,7.75e-11,239;DOID:305,2.74e-09,106;DOID:2531,6.26e-09,51;DOID:0060083,6.26e-09,51;DOID:1325,1.37e-08,7;DOID:3904,1.37e-08,7;DOID:0050686,1.99e-08,137;DOID:1240,2.40e-08,39;DOID:3910,3.56e-08,2;DOID:8692,5.67e-07,31;DOID:3905,7.21e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0000998!8.51e-08!1;UBERON:0006868!8.51e-08!1;UBERON:0004911!1.11e-07!1;UBERON:0001764!1.26e-07!1;UBERON:0001825!1.26e-07!1 | |ontology_enrichment_uberon=UBERON:0000998!8.51e-08!1;UBERON:0006868!8.51e-08!1;UBERON:0004911!1.11e-07!1;UBERON:0001764!1.26e-07!1;UBERON:0001825!1.26e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;3.56e-08;2!UBERON:0002173;3.56e-08;2!UBERON:0002186;3.56e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,3.56e-08,2;UBERON:0002173,3.56e-08,2;UBERON:0002186,3.56e-08,2 | |||
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|short_description=p@chr4:161747552..161747607,- | |short_description=p@chr4:161747552..161747607,- | ||
}} | }} |
Latest revision as of 02:55, 30 July 2015
Short description: | p@chr4:161747552..161747607, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:161747552..161747607, - |
Coexpression cluster: | C2745_bronchioalveolar_signet_mucinous_adenocarcinoma_giant_gall_smallcell |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 5.37e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 3.56e-08 | 2 |
alveolar duct | 3.56e-08 | 2 |
bronchiole | 3.56e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.13e-28 | 2 |
cystadenocarcinoma | 8.17e-15 | 1 |
mucinous cystadenocarcinoma | 8.17e-15 | 1 |
bone marrow cancer | 1.84e-14 | 1 |
myeloma | 1.84e-14 | 1 |
cancer | 4.21e-11 | 235 |
disease of cellular proliferation | 7.75e-11 | 239 |
carcinoma | 2.74e-09 | 106 |
hematologic cancer | 6.26e-09 | 51 |
immune system cancer | 6.26e-09 | 51 |
bronchus cancer | 1.37e-08 | 7 |
bronchogenic carcinoma | 1.37e-08 | 7 |
organ system cancer | 1.99e-08 | 137 |
leukemia | 2.40e-08 | 39 |
lung adenocarcinoma | 3.56e-08 | 2 |
myeloid leukemia | 5.67e-07 | 31 |
lung carcinoma | 7.21e-07 | 9 |