FFCP PHASE1:Hg19::chr4:160024323..160024354,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:160024323..160024354,+ | |||
|coexpression_cluster_id=C446 | |||
|description=CAGE_peak_at_chr4:160024323..160024354,+ | |description=CAGE_peak_at_chr4:160024323..160024354,+ | ||
|id=chr4:160024323..160024354,+ | |id=chr4:160024323..160024354,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.23e-20!42;CL:0000766!7.96e-19!76;CL:0000557!1.88e-16!71;CL:0000860!1.91e-16!45;CL:0000839!7.81e-15!70;CL:0002009!2.79e-13!65;CL:0000763!4.03e-13!112;CL:0000049!4.03e-13!112;CL:0002194!2.51e-12!63;CL:0000576!2.51e-12!63;CL:0000040!2.51e-12!63;CL:0000559!2.51e-12!63;CL:0002139!2.88e-08!24;CL:0000071!2.22e-07!18;CL:0002546!2.22e-07!18;CL:0000115!2.42e-07!35 | |ontology_enrichment_celltype=CL:0002057!3.23e-20!42;CL:0000766!7.96e-19!76;CL:0000557!1.88e-16!71;CL:0000860!1.91e-16!45;CL:0000839!7.81e-15!70;CL:0002009!2.79e-13!65;CL:0000763!4.03e-13!112;CL:0000049!4.03e-13!112;CL:0002194!2.51e-12!63;CL:0000576!2.51e-12!63;CL:0000040!2.51e-12!63;CL:0000559!2.51e-12!63;CL:0002139!2.88e-08!24;CL:0000071!2.22e-07!18;CL:0002546!2.22e-07!18;CL:0000115!2.42e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.16e-17;33!CL:0002057;5.16e-17;33!CL:0000473;1.51e-12;39!CL:0000234;1.51e-12;39!CL:0000576;2.60e-11;48!CL:0000766;3.46e-11;69!CL:0002139;1.79e-08;24!CL:0000071;8.09e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.09e-22,72;CL:0000860,1.57e-20,42;CL:0002057,1.57e-20,42;CL:0000557,3.13e-19,67;CL:0000473,5.73e-18,48;CL:0000234,5.73e-18,48;CL:0000839,1.98e-17,66;CL:0002009,8.68e-16,61;CL:0000763,7.10e-15,108;CL:0000049,7.10e-15,108;CL:0002194,9.56e-15,59;CL:0000576,9.56e-15,59;CL:0000040,9.56e-15,59;CL:0000559,9.56e-15,59;CL:0002139,2.22e-08,24;CL:0000071,1.77e-07,18;CL:0002546,1.77e-07,18;CL:0000115,3.70e-07,36 | |||
|ontology_enrichment_development_v019=CL:0002057;3.38e-15;42!CL:0002546;8.09e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.24e-17!115;UBERON:0002390!2.92e-15!102;UBERON:0003061!2.92e-15!102;UBERON:0002193!3.00e-15!112;UBERON:0003081!1.47e-14!216;UBERON:0001474!6.35e-14!86;UBERON:0002371!7.24e-14!80;UBERON:0004765!4.10e-12!101;UBERON:0001434!4.10e-12!101;UBERON:0000468!1.74e-11!659;UBERON:0000467!4.67e-11!625;UBERON:0000480!6.19e-11!626;UBERON:0002405!2.67e-10!115;UBERON:0000922!5.00e-08!612;UBERON:0002050!9.06e-08!605;UBERON:0005423!9.06e-08!605;UBERON:0000923!9.51e-08!604;UBERON:0005291!9.51e-08!604;UBERON:0006598!9.51e-08!604;UBERON:0002532!9.51e-08!604;UBERON:0000062!1.69e-07!511;UBERON:0001986!2.22e-07!18;UBERON:0004638!2.22e-07!18;UBERON:0004852!2.22e-07!18;UBERON:0002619!8.80e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;8.09e-08;18!UBERON:0001986;8.09e-08;18!UBERON:0004852;8.09e-08;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.83e-18,203;UBERON:0002390,2.31e-17,98;UBERON:0003061,2.31e-17,98;UBERON:0007023,2.56e-17,114;UBERON:0002193,3.06e-17,108;UBERON:0002371,2.76e-16,76;UBERON:0001474,3.03e-16,82;UBERON:0002405,6.62e-15,93;UBERON:0004765,1.57e-14,90;UBERON:0001434,6.42e-14,100;UBERON:0000926,1.14e-12,315;UBERON:0004120,1.14e-12,315;UBERON:0006603,1.14e-12,315;UBERON:0000923,7.15e-10,560;UBERON:0010316,7.15e-10,560;UBERON:0005291,7.15e-10,560;UBERON:0006598,7.15e-10,560;UBERON:0010317,7.15e-10,560;UBERON:0002532,7.15e-10,560;UBERON:0002050,2.23e-09,564;UBERON:0005423,5.34e-08,581;UBERON:0000922,8.38e-08,592;UBERON:0002204,1.27e-07,167;UBERON:0004638,1.77e-07,18;UBERON:0001986,1.77e-07,18;UBERON:0004852,1.77e-07,18;UBERON:0002619,7.18e-07,22 | |||
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| ||
|short_description=p@chr4:160024323..160024354,+ | |short_description=p@chr4:160024323..160024354,+ | ||
}} | }} |
Latest revision as of 02:53, 30 July 2015
Short description: | p@chr4:160024323..160024354, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:160024323..160024354, + |
Coexpression cluster: | C446_Neutrophils_Mast_Eosinophils_Whole_CD14_immature_optic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 9.09e-22 | 72 |
classical monocyte | 1.57e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.57e-20 | 42 |
granulocyte monocyte progenitor cell | 3.13e-19 | 67 |
defensive cell | 5.73e-18 | 48 |
phagocyte | 5.73e-18 | 48 |
myeloid lineage restricted progenitor cell | 1.98e-17 | 66 |
macrophage dendritic cell progenitor | 8.68e-16 | 61 |
myeloid cell | 7.10e-15 | 108 |
common myeloid progenitor | 7.10e-15 | 108 |
monopoietic cell | 9.56e-15 | 59 |
monocyte | 9.56e-15 | 59 |
monoblast | 9.56e-15 | 59 |
promonocyte | 9.56e-15 | 59 |
endothelial cell of vascular tree | 2.22e-08 | 24 |
blood vessel endothelial cell | 1.77e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.77e-07 | 18 |
endothelial cell | 3.70e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.83e-18 | 203 |
hematopoietic system | 2.31e-17 | 98 |
blood island | 2.31e-17 | 98 |
adult organism | 2.56e-17 | 114 |
hemolymphoid system | 3.06e-17 | 108 |
bone marrow | 2.76e-16 | 76 |
bone element | 3.03e-16 | 82 |
immune system | 6.62e-15 | 93 |
skeletal element | 1.57e-14 | 90 |
skeletal system | 6.42e-14 | 100 |
mesoderm | 1.14e-12 | 315 |
mesoderm-derived structure | 1.14e-12 | 315 |
presumptive mesoderm | 1.14e-12 | 315 |
germ layer | 7.15e-10 | 560 |
germ layer / neural crest | 7.15e-10 | 560 |
embryonic tissue | 7.15e-10 | 560 |
presumptive structure | 7.15e-10 | 560 |
germ layer / neural crest derived structure | 7.15e-10 | 560 |
epiblast (generic) | 7.15e-10 | 560 |
embryonic structure | 2.23e-09 | 564 |
developing anatomical structure | 5.34e-08 | 581 |
embryo | 8.38e-08 | 592 |
musculoskeletal system | 1.27e-07 | 167 |
blood vessel endothelium | 1.77e-07 | 18 |
endothelium | 1.77e-07 | 18 |
cardiovascular system endothelium | 1.77e-07 | 18 |
regional part of cerebral cortex | 7.18e-07 | 22 |