FFCP PHASE1:Hg19::chr4:124509630..124509638,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:124509630..124509638,+ | |||
|description=CAGE_peak_at_chr4:124509630..124509638,+ | |description=CAGE_peak_at_chr4:124509630..124509638,+ | ||
|id=chr4:124509630..124509638,+ | |id=chr4:124509630..124509638,+ | ||
|ontology_enrichment_celltype=CL:0000083!4.62e-07!4;CL:0000223!7.51e-07!59 | |ontology_enrichment_celltype=CL:0000083!4.62e-07!4;CL:0000223!7.51e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002563;2.53e-11;4!CL:0002149;6.55e-08;6!CL:0002255;6.55e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.53e-11,4;CL:0002149,5.92e-08,6;CL:0002255,5.92e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1793!4.62e-07!4;DOID:305!6.20e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:4468;5.15e-21;2!DOID:3001;6.55e-08;6!DOID:299;2.43e-07;25!DOID:120;7.24e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,5.70e-21,2;DOID:3001,5.92e-08,6;DOID:299,2.35e-07,25;DOID:120,7.03e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0000160!7.73e-16!27;UBERON:0005409!6.87e-15!35;UBERON:0001007!1.16e-09!155;UBERON:0001555!1.16e-09!155;UBERON:0007026!1.16e-09!155;UBERON:0004921!1.34e-09!129;UBERON:0004185!1.34e-09!129;UBERON:0000059!8.08e-09!11;UBERON:0004119!1.51e-08!169;UBERON:0000925!1.51e-08!169;UBERON:0006595!1.51e-08!169;UBERON:0001154!2.84e-07!1;UBERON:0001153!2.84e-07!1 | |ontology_enrichment_uberon=UBERON:0000160!7.73e-16!27;UBERON:0005409!6.87e-15!35;UBERON:0001007!1.16e-09!155;UBERON:0001555!1.16e-09!155;UBERON:0007026!1.16e-09!155;UBERON:0004921!1.34e-09!129;UBERON:0004185!1.34e-09!129;UBERON:0000059!8.08e-09!11;UBERON:0004119!1.51e-08!169;UBERON:0000925!1.51e-08!169;UBERON:0006595!1.51e-08!169;UBERON:0001154!2.84e-07!1;UBERON:0001153!2.84e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001242;2.53e-11;4!UBERON:0001262;2.53e-11;4!UBERON:0004786;2.53e-11;4!UBERON:0004808;2.53e-11;4!UBERON:0001277;2.53e-11;4!UBERON:0000160;7.25e-10;17!UBERON:0005409;6.19e-08;22!UBERON:0000485;5.08e-07;7!UBERON:0003929;5.08e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.53e-11,4;UBERON:0001262,2.53e-11,4;UBERON:0004786,2.53e-11,4;UBERON:0004808,2.53e-11,4;UBERON:0001277,2.53e-11,4;UBERON:0000160,7.76e-10,17;UBERON:0005409,4.15e-07,25 | |||
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|short_description=p@chr4:124509630..124509638,+ | |short_description=p@chr4:124509630..124509638,+ | ||
}} | }} |
Latest revision as of 01:27, 30 July 2015
Short description: | p@chr4:124509630..124509638, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:124509630..124509638, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.53e-11 | 4 |
epithelial cell of uterus | 5.92e-08 | 6 |
stromal cell of endometrium | 5.92e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 2.53e-11 | 4 |
wall of intestine | 2.53e-11 | 4 |
gastrointestinal system mucosa | 2.53e-11 | 4 |
gastrointestinal system epithelium | 2.53e-11 | 4 |
intestinal epithelium | 2.53e-11 | 4 |
intestine | 7.76e-10 | 17 |
gastrointestinal system | 4.15e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 5.70e-21 | 2 |
female reproductive endometrioid cancer | 5.92e-08 | 6 |
adenocarcinoma | 2.35e-07 | 25 |
female reproductive organ cancer | 7.03e-07 | 27 |