FFCP PHASE1:Hg19::chr3:98275078..98275089,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:98275078..98275089,- | |||
|coexpression_cluster_id=C1931 | |||
|description=CAGE_peak_at_chr3:98275078..98275089,- | |description=CAGE_peak_at_chr3:98275078..98275089,- | ||
|id=chr3:98275078..98275089,- | |id=chr3:98275078..98275089,- | ||
|ontology_enrichment_celltype=CL:0000988!2.35e-11!182;CL:0002032!4.85e-10!165;CL:0000837!4.85e-10!165;CL:0000037!2.27e-09!172;CL:0000566!2.27e-09!172;CL:0000945!1.29e-08!24;CL:0000826!1.29e-08!24;CL:0000785!3.60e-08!2;CL:0000955!3.60e-08!2;CL:0000818!3.60e-08!2;CL:0000954!3.60e-08!2;CL:0000816!3.60e-08!2;CL:0000838!1.10e-07!52;CL:0000542!1.72e-07!53;CL:0000051!1.72e-07!53 | |ontology_enrichment_celltype=CL:0000988!2.35e-11!182;CL:0002032!4.85e-10!165;CL:0000837!4.85e-10!165;CL:0000037!2.27e-09!172;CL:0000566!2.27e-09!172;CL:0000945!1.29e-08!24;CL:0000826!1.29e-08!24;CL:0000785!3.60e-08!2;CL:0000955!3.60e-08!2;CL:0000818!3.60e-08!2;CL:0000954!3.60e-08!2;CL:0000816!3.60e-08!2;CL:0000838!1.10e-07!52;CL:0000542!1.72e-07!53;CL:0000051!1.72e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0002127;1.82e-13;1!CL:0000911;1.82e-13;1!CL:0000814;1.82e-13;1!CL:0000946;7.68e-13;1!CL:0000786;7.68e-13;1!CL:1000415;2.50e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.82e-13,1;CL:0000914,1.82e-13,1;CL:0000911,1.82e-13,1;CL:0000814,1.82e-13,1;CL:0002042,1.82e-13,1;CL:0002039,1.82e-13,1;CL:0002040,1.82e-13,1;CL:0002041,1.82e-13,1;CL:0000946,6.06e-13,1;CL:0000786,6.06e-13,1;CL:0000980,6.06e-13,1;CL:0000893,2.28e-07,2;CL:0002489,2.28e-07,2;CL:0000809,2.28e-07,2;CL:0000808,2.28e-07,2;CL:0000894,2.28e-07,2;CL:0000806,2.28e-07,2;CL:0000807,2.28e-07,2;CL:0000805,2.28e-07,2;CL:0002425,2.28e-07,2;CL:1000415,2.43e-07,2;CL:0000785,4.17e-07,2;CL:0000955,4.17e-07,2;CL:0000818,4.17e-07,2;CL:0000954,4.17e-07,2;CL:0000816,4.17e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002425;2.28e-07;2!CL:0000954;4.69e-07;2 | |||
|ontology_enrichment_disease=DOID:2531!1.55e-12!51;DOID:0060083!1.55e-12!51;DOID:0060058!4.48e-09!10;DOID:0050686!4.37e-08!137;DOID:1240!2.30e-07!39 | |ontology_enrichment_disease=DOID:2531!1.55e-12!51;DOID:0060083!1.55e-12!51;DOID:0060058!4.48e-09!10;DOID:0050686!4.37e-08!137;DOID:1240!2.30e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:0060060;4.49e-13;1!DOID:0060061;4.49e-13;1!DOID:8691;4.49e-13;1!DOID:630;7.68e-13;1!DOID:0050177;7.68e-13;1!DOID:0050427;7.68e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,4.23e-13,1;DOID:0060061,4.23e-13,1;DOID:8691,4.23e-13,1;DOID:630,8.64e-13,1;DOID:0050177,8.64e-13,1;DOID:0050427,8.64e-13,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;1.61e-13;1!UBERON:0009842;1.61e-13;1!UBERON:0003704;1.61e-13;1!UBERON:0001171;1.61e-13;1!UBERON:0001172;1.61e-13;1!UBERON:0002331;4.78e-11;10!UBERON:0002294;7.68e-08;7!UBERON:0001173;7.68e-08;7!UBERON:0000178;1.53e-07;15!UBERON:0000179;1.53e-07;15!UBERON:0000463;1.53e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,1.61e-13,1;UBERON:0009842,1.61e-13,1;UBERON:0003704,1.61e-13,1;UBERON:0001171,1.61e-13,1;UBERON:0001172,1.61e-13,1;UBERON:0002331,4.46e-11,10;UBERON:0000358,4.46e-11,10;UBERON:0000307,4.46e-11,10;UBERON:0000091,4.46e-11,10;UBERON:0000087,4.46e-11,10;UBERON:0007010,4.46e-11,10;UBERON:0007806,4.46e-11,10;UBERON:0008780,4.46e-11,10;UBERON:0005728,4.46e-11,10;UBERON:0004177,8.94e-08,7;UBERON:0005057,8.94e-08,7;UBERON:0000178,1.47e-07,15;UBERON:0000179,1.47e-07,15;UBERON:0000463,1.47e-07,15 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993374274723366,0.985207073399349,0.629686250509434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47296445977717,0,0,0,0,0,0,0,0.320929027076094,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.334231370655521,0,0,0,0.128091319725675,0.260118695119756,1.64437904603676,4.69795030235942,0.579606171470105,0,0,0,1.24640276967323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.07889666347571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5745161103971,0.846694330895531,0,0.561594356226918,0,0,0,0.338583555603207,3.05117342697029,1.21079824314629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659215496907038,0,0,0.276283915531148,0,0.613612095012929,2.8309505256046,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3057420314761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,3.55825354416746,1.35920332841153,1.46190729307638,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.73334090112883,0,0.19980960958213,0,0,0,0,0.745515213392595,0,0,0,0.101998217636322,6.0679623879319,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0.316801009558219,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730755590285376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.770479321629213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0.245772908753719,0,2.99981093782395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61327582578091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,3.19811698959773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182037633146,0,0,0,0,0,0,0,1.28227396921293 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|short_description=p@chr3:98275078..98275089,- | |short_description=p@chr3:98275078..98275089,- | ||
}} | }} |
Latest revision as of 00:02, 30 July 2015
Short description: | p@chr3:98275078..98275089, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:98275078..98275089, - |
Coexpression cluster: | C1931_cholangiocellular_NK_cord_gall_glioma_CD4_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.82e-13 | 1 |
immature NK T cell | 1.82e-13 | 1 |
effector T cell | 1.82e-13 | 1 |
mature NK T cell | 1.82e-13 | 1 |
immature NK T cell stage IV | 1.82e-13 | 1 |
immature NK T cell stage I | 1.82e-13 | 1 |
immature NK T cell stage II | 1.82e-13 | 1 |
immature NK T cell stage III | 1.82e-13 | 1 |
antibody secreting cell | 6.06e-13 | 1 |
plasma cell | 6.06e-13 | 1 |
plasmablast | 6.06e-13 | 1 |
thymocyte | 2.28e-07 | 2 |
double negative thymocyte | 2.28e-07 | 2 |
double-positive, alpha-beta thymocyte | 2.28e-07 | 2 |
DN4 thymocyte | 2.28e-07 | 2 |
DN1 thymic pro-T cell | 2.28e-07 | 2 |
DN2 thymocyte | 2.28e-07 | 2 |
DN3 thymocyte | 2.28e-07 | 2 |
immature single positive thymocyte | 2.28e-07 | 2 |
early T lineage precursor | 2.28e-07 | 2 |
epithelial cell of gall bladder | 2.43e-07 | 2 |
mature B cell | 4.17e-07 | 2 |
pre-B-II cell | 4.17e-07 | 2 |
transitional stage B cell | 4.17e-07 | 2 |
small pre-B-II cell | 4.17e-07 | 2 |
immature B cell | 4.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 1.61e-13 | 1 |
acinus | 1.61e-13 | 1 |
intrahepatic bile duct | 1.61e-13 | 1 |
portal lobule | 1.61e-13 | 1 |
hepatic acinus | 1.61e-13 | 1 |
umbilical cord | 4.46e-11 | 10 |
blastocyst | 4.46e-11 | 10 |
blastula | 4.46e-11 | 10 |
bilaminar disc | 4.46e-11 | 10 |
inner cell mass | 4.46e-11 | 10 |
cleaving embryo | 4.46e-11 | 10 |
connecting stalk | 4.46e-11 | 10 |
inner cell mass derived epiblast | 4.46e-11 | 10 |
extraembryonic mesoderm | 4.46e-11 | 10 |
hemopoietic organ | 8.94e-08 | 7 |
immune organ | 8.94e-08 | 7 |
blood | 1.47e-07 | 15 |
haemolymphatic fluid | 1.47e-07 | 15 |
organism substance | 1.47e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 4.23e-13 | 1 |
cutaneous T cell lymphoma | 4.23e-13 | 1 |
mycosis fungoides | 4.23e-13 | 1 |
genetic disease | 8.64e-13 | 1 |
monogenic disease | 8.64e-13 | 1 |
xeroderma pigmentosum | 8.64e-13 | 1 |