FFCP PHASE1:Hg19::chr3:80819492..80819506,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:80819492..80819506,- | |||
|coexpression_cluster_id=C2755 | |coexpression_cluster_id=C2755 | ||
|description=CAGE_peak_at_chr3:80819492..80819506,- | |description=CAGE_peak_at_chr3:80819492..80819506,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002541;2.78e-12;3!CL:0000039;2.93e-09;7!CL:0000586;2.93e-09;7 | |ontology_enrichment_celltype_v019=CL:0002541;2.78e-12;3!CL:0000039;2.93e-09;7!CL:0000586;2.93e-09;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.24e-12,3;CL:0000039,2.75e-09,7;CL:0000586,2.75e-09,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.39e-13;10!UBERON:0005564;6.39e-13;10 | |ontology_enrichment_development_v019=UBERON:0009117;6.39e-13;10!UBERON:0005564;6.39e-13;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:162,2.10e-07,235;DOID:14566,4.10e-07,239 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000991;1.49e-12;21!UBERON:0003124;2.78e-12;3!UBERON:0000920;2.78e-12;3!UBERON:0000473;1.23e-11;8!UBERON:0003135;2.23e-08;11!UBERON:0002118;6.31e-07;5!UBERON:0003133;6.80e-07;44 | |ontology_enrichment_uberon_v019=UBERON:0000991;1.49e-12;21!UBERON:0003124;2.78e-12;3!UBERON:0000920;2.78e-12;3!UBERON:0000473;1.23e-11;8!UBERON:0003135;2.23e-08;11!UBERON:0002118;6.31e-07;5!UBERON:0003133;6.80e-07;44 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,1.42e-12,21;UBERON:0009196,1.42e-12,21;UBERON:0009117,1.42e-12,21;UBERON:0005564,1.42e-12,21;UBERON:0000920,3.24e-12,3;UBERON:0004176,6.26e-12,22;UBERON:0000473,1.34e-11,8;UBERON:0003124,3.41e-09,7;UBERON:0003133,1.04e-08,48;UBERON:0003135,2.36e-08,11;UBERON:0005156,6.08e-08,59;UBERON:0000990,6.08e-08,59;UBERON:0002323,1.60e-07,46;UBERON:0003886,2.20e-07,54;UBERON:0002118,5.44e-07,5;UBERON:0004458,6.20e-07,49 | |||
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|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0.331397375727916,0,1.20538905604795,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0,0,0.6024118375565,0,0,0,0,0,0,0.217010870715852,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,4.55370375287559,0,0,0,0,0,0.590129310341499,0,0.411202997999018,0.334372990781356,0,0,0,0.222820913770347,0.294605907474837,0,0,0,0,0,0,0,0.444859689486181,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434473211648397,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.785874452986276,0,0,0,0,0,0,0,0,1.78886166630035,0,0.347140501607594,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0.900891843866578,1.53316637465883,0.949265659568129,2.19842092716489,0,0,0,0,0,0,0.286836620748814,0.709336764396714,0,0,0,0.311211035399766,0,0.490385709340376,0,0,0.234321431833797,0,0.570471821544449,0,0.352303495931295,0.161872944368132,0,0,0,0.103325781175765,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0.339121184620975,0,0,0,0.243947412259191,0.530119073285941,1.04574548582567,0.621966330092223,0.504641701751257,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0.171567810298526,0,0,0,0.185176890317059,0,0,0,0,0.469634776943287,0,0.925971025153221,0.190254152234598,0,0,0,0,0,0,0,0,1.61205340865127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,2.45616259939778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0.77005821767849,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0.542530047399471,0,0,0,0,0,0,0,0,0.184369168541703,0.173767228936166,0.195801157462741,0.343143423810856,0.206768026122887,0,0,0,0,0,0.496215615637554,0,0.280660094433074,0.128139149255701,0,0.482561763430822,0,0,0,0,0,0.116210378459959,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0.431831832204279,3.08454505380579,0.270946437543853,0,0,0,0,0,0,0,0,0.325378394664303,2.98818933778395,0,0,0,0,0,0,0,0,0,0.322260734604821,0,0,0,0,0,0,0.10115778085555,0.464845549297286,1.88887408098384,0,0,0,0,0,0.286249773483982,0.372158369359667,0.316379424718726,0,0,0.855877976067841,0.636406495851874,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0.349934720244983,0,0,0,3.85989583184795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20536194382929,0,0,0,0,0,0,0,0,0,8.6729178032613,0,0,0,0,0,0,0,0,0,0,0,1.39203086947621,0,0,0,0,0,0,0,5.01495229248653,0,2.14870036263921,0,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,1.593108275997,0,0,0,5.24888304089858,0,0,0,0,0,0.591095237907095,0,0,7.11061095820877,0.230850775511391,5.01345045726805,0.922255617552241,0,5.97560545571044,3.19001159731919,1.28236630762607,11.72676507241,0,0,0,4.06072189110925,2.35275041181287,2.68514539161348,0.569261198172555,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0.468528891450678,0,0,0,0,1.20990716048664,0.61214552326098,0.252746318513952,0,0,0,0,0,0,2.84609546029793,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,2.87788041758177,0.397429223405979,0.126621591911757,0,1.60317640503067,0.213452994739353,5.19504984913539,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0.223171457441873,0.268733889946905,0,0,0,0,0,0,0,0,0,0.321506296930038,0.825236619583403,0.83088067605837,0,0.77380195455795,0.121499113316049,0,0.157611414598396,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0.410462603746695,0,1.24643300672138,0,1.32506888912221,0.517131825446202,0,0,0,0,0.78602152549833,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.244052529803926,0.1251909307065,0,0,0.372578417648301,0,0,0,2.56918800190471,0,0,0,0,0,0.554805861502613,0,0,0,1.83072054717539,0,0.777186002913902,0,0.477890301491107,0,0,0,0.265841714557995,0,0,0,1.62748293281865,1.09109195521536,0,0,1.99047944349308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0.163565394255844,0,0,1.47918486351039,0,0,0,0,0,0.139879507719444,0,0,0,0,15.398558985074,0,0,0,0,0,0,0,0.352675943690684,0,0.192687675289379,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.225630985047772,0,0,13.619148113034,0,2.80926563812386,0.135075169236789,0,0,0.126831620387814,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0,13.3053555243958,0,0,0.271878931907327,0.0657727735628491,0,4.11556187000656,0.235479278551542,0.942693539496011,0,0,0,0,0,0,0,4.17259853526191,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0.905777061400041,0.154348316215889,0.218559560503957,0,0,0,0,0,0,0,0,0.257831551894309,0,0,0,0,0,0,0,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,5.07713070004565,2.6649520865105,3.50990555009325,1.13668047327359,1.60778478093707,0,0,0,0.23806443146374,0,0.682821857254437,11.9981092961256,0.318235791390825,0.202117188958219,0,0,0.134704106029175,0.502055437748735,0.665320713092027,0,0,0,0,0,0.122241444182866,0.813792356631477,0,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| ||
|short_description=p@chr3:80819492..80819506,- | |short_description=p@chr3:80819492..80819506,- | ||
}} | }} |
Latest revision as of 23:42, 29 July 2015
Short description: | p@chr3:80819492..80819506, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:80819492..80819506, - |
Coexpression cluster: | C2755_placenta_pancreatic_neuroblastoma_chorionic_thyroid_acute_cholangiocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.24e-12 | 3 |
germ line cell | 2.75e-09 | 7 |
germ cell | 2.75e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
gonad | 1.42e-12 | 21 |
indifferent external genitalia | 1.42e-12 | 21 |
indifferent gonad | 1.42e-12 | 21 |
gonad primordium | 1.42e-12 | 21 |
egg chorion | 3.24e-12 | 3 |
external genitalia | 6.26e-12 | 22 |
testis | 1.34e-11 | 8 |
chorion | 3.41e-09 | 7 |
reproductive organ | 1.04e-08 | 48 |
male reproductive organ | 2.36e-08 | 11 |
reproductive structure | 6.08e-08 | 59 |
reproductive system | 6.08e-08 | 59 |
body cavity | 1.60e-07 | 46 |
body cavity precursor | 2.20e-07 | 54 |
right ovary | 5.44e-07 | 5 |
body cavity or lining | 6.20e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.10e-07 | 235 |
disease of cellular proliferation | 4.10e-07 | 239 |