FFCP PHASE1:Hg19::chr3:69887638..69887672,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AY632572_5end | |association_with_transcript=0bp_to_AY632572_5end | ||
|cluster_id=chr3:69887638..69887672,+ | |||
|coexpression_cluster_id=C17 | |coexpression_cluster_id=C17 | ||
|description=CAGE_peak_1_at_AY632572_5end | |description=CAGE_peak_1_at_AY632572_5end | ||
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|ontology_enrichment_celltype=CL:0002274!2.67e-15!5;CL:0000457!2.67e-15!5;CL:0002191!2.67e-15!5;CL:0000097!2.67e-15!5;CL:0000831!2.67e-15!5;CL:0002028!2.67e-15!5;CL:0000148!1.84e-13!10;CL:0000541!1.84e-13!10;CL:0002567!2.56e-09!3;CL:0000147!2.94e-09!14;CL:0002504!1.28e-08!3;CL:1000279!1.28e-08!3;CL:1000280!1.28e-08!3;CL:0000163!2.93e-08!9;CL:0002150!3.68e-08!3;CL:0000861!3.68e-08!3 | |ontology_enrichment_celltype=CL:0002274!2.67e-15!5;CL:0000457!2.67e-15!5;CL:0002191!2.67e-15!5;CL:0000097!2.67e-15!5;CL:0000831!2.67e-15!5;CL:0002028!2.67e-15!5;CL:0000148!1.84e-13!10;CL:0000541!1.84e-13!10;CL:0002567!2.56e-09!3;CL:0000147!2.94e-09!14;CL:0002504!1.28e-08!3;CL:1000279!1.28e-08!3;CL:1000280!1.28e-08!3;CL:0000163!2.93e-08!9;CL:0002150!3.68e-08!3;CL:0000861!3.68e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000097;7.81e-39;5!CL:0000148;1.44e-35;10!CL:0000147;3.28e-25;14!CL:0002567;1.54e-22;3!CL:0000163;1.53e-21;9!CL:0000710;2.00e-17;20!CL:0000075;1.05e-12;27!CL:0002566;4.70e-09;1!CL:0002077;6.87e-09;34!CL:0002599;1.59e-08;1 | |ontology_enrichment_celltype_v019=CL:0000097;7.81e-39;5!CL:0000148;1.44e-35;10!CL:0000147;3.28e-25;14!CL:0002567;1.54e-22;3!CL:0000163;1.53e-21;9!CL:0000710;2.00e-17;20!CL:0000075;1.05e-12;27!CL:0002566;4.70e-09;1!CL:0002077;6.87e-09;34!CL:0002599;1.59e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,7.82e-39,5;CL:0002028,7.82e-39,5;CL:0000148,1.48e-35,10;CL:0000541,1.48e-35,10;CL:0000147,3.35e-25,14;CL:0002567,1.49e-22,3;CL:0000163,1.53e-21,9;CL:0000710,2.02e-17,20;CL:0000075,1.06e-12,27;CL:0002077,6.36e-10,34;CL:0002566,4.52e-09,1;CL:0002599,1.42e-08,1;CL:0000333,1.12e-07,41;CL:0000151,3.43e-07,36 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.35e-19;29 | |ontology_enrichment_development_v019=UBERON:0008947;2.35e-19;29 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;2.41e-15;2 | |ontology_enrichment_disease_v019=DOID:1909;2.41e-15;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,2.59e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.14e-25!9;UBERON:0001557!8.76e-11!19;UBERON:0001007!7.44e-08!155;UBERON:0001555!7.44e-08!155;UBERON:0007026!7.44e-08!155;UBERON:0008947!7.57e-08!38;UBERON:0003258!7.57e-08!38;UBERON:0004921!1.57e-07!129;UBERON:0004185!1.57e-07!129;UBERON:0001155!5.41e-07!9 | |ontology_enrichment_uberon=UBERON:0001737!5.14e-25!9;UBERON:0001557!8.76e-11!19;UBERON:0001007!7.44e-08!155;UBERON:0001555!7.44e-08!155;UBERON:0007026!7.44e-08!155;UBERON:0008947!7.57e-08!38;UBERON:0003258!7.57e-08!38;UBERON:0004921!1.57e-07!129;UBERON:0004185!1.57e-07!129;UBERON:0001155!5.41e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.34e-65;9!UBERON:0001557;3.34e-65;9!UBERON:0000072;5.02e-14;37!UBERON:0000065;7.33e-12;44!UBERON:0007195;1.59e-08;1 | |ontology_enrichment_uberon_v019=UBERON:0001737;3.34e-65;9!UBERON:0001557;3.34e-65;9!UBERON:0000072;5.02e-14;37!UBERON:0000065;7.33e-12;44!UBERON:0007195;1.59e-08;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.06e-65,9;UBERON:0001557,2.48e-30,19;UBERON:0008947,1.69e-14,38;UBERON:0003258,1.69e-14,38;UBERON:0000072,1.85e-11,47;UBERON:0000065,8.49e-10,54;UBERON:0007195,2.22e-08,1;UBERON:0001041,6.79e-07,87;UBERON:0001004,8.79e-07,74 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0.822335776043652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.724232594804119,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,1.38532057742091,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0.464367928031979,0,2.48444280083672,2.69735504124963,1.92808823906786,3.08823123650703,2.39667388501647,3.08451804844426,2.29213223872279,2.74710051175484,2.69323009862473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,436.992292013702,11.6223932897458,13.0616712790686,5.04419836959365,8.58448547299384,4.508350494744,3.05590740446622,1.17217447210047,1.71072446022705,4.01027221542962,3.00343057843917,1.42913216315289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.542530047399471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229628896329213,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0.899362287916574,0.274537029736055,0.706874414074119,0,0,0,1.46290121726877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41620002574687,0,0.0769502585037971,0,0,0,0,0,0.274792780205587,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387025325156341,0.292357268344742,0.164230914106418,0,0,0,0.137041924646751,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66814029295813,1.14186133417987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@AY632572 | |short_description=p1@AY632572 | ||
}} | }} |
Latest revision as of 23:23, 29 July 2015
Short description: | p1@AY632572 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AY632572_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 0bp_to_AY632572_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 7.82e-39 | 5 |
basophil mast progenitor cell | 7.82e-39 | 5 |
melanocyte | 1.48e-35 | 10 |
melanoblast | 1.48e-35 | 10 |
pigment cell | 3.35e-25 | 14 |
light melanocyte | 1.49e-22 | 3 |
endocrine cell | 1.53e-21 | 9 |
neurecto-epithelial cell | 2.02e-17 | 20 |
columnar/cuboidal epithelial cell | 1.06e-12 | 27 |
ecto-epithelial cell | 6.36e-10 | 34 |
dark melanocyte | 4.52e-09 | 1 |
smooth muscle cell of the esophagus | 1.42e-08 | 1 |
migratory neural crest cell | 1.12e-07 | 41 |
secretory cell | 3.43e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.06e-65 | 9 |
upper respiratory tract | 2.48e-30 | 19 |
respiratory primordium | 1.69e-14 | 38 |
endoderm of foregut | 1.69e-14 | 38 |
segment of respiratory tract | 1.85e-11 | 47 |
respiratory tract | 8.49e-10 | 54 |
stroma of bone marrow | 2.22e-08 | 1 |
foregut | 6.79e-07 | 87 |
respiratory system | 8.79e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.59e-15 | 2 |