FFCP PHASE1:Hg19::chr3:67141193..67141198,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:67141193..67141198,+
|short_description=p@chr3:67141193..67141198,+
|description=CAGE_peak_at_chr3:67141193..67141198,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:67141193..67141198,+ | |||
|description=CAGE_peak_at_chr3:67141193..67141198,+ | |||
|id=chr3:67141193..67141198,+ | |||
|ontology_enrichment_celltype=CL:0000359!3.27e-19!32;CL:0000055!9.39e-16!180;CL:0000680!1.16e-15!57;CL:0000056!1.16e-15!57;CL:0000355!1.16e-15!57;CL:0000192!2.27e-15!42;CL:0000514!2.27e-15!42;CL:0000187!3.00e-15!54;CL:0000183!1.85e-13!59;CL:0000393!3.89e-13!60;CL:0000211!3.89e-13!60;CL:0002620!8.42e-12!23;CL:0002595!3.08e-09!5;CL:0000048!1.05e-07!430;CL:0000723!2.14e-07!436;CL:0000064!3.13e-07!3;CL:0005012!3.13e-07!3;CL:0000067!3.13e-07!3;CL:0002304!3.13e-07!3;CL:0000057!3.79e-07!75;CL:0000034!5.36e-07!444;CL:0002494!9.60e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.29e-30;32!CL:0002595;2.07e-24;5!CL:0000192;1.64e-21;43!CL:0002593;4.12e-16;2!CL:0002589;2.99e-15;2!CL:0002494;5.10e-11;16!CL:0002592;1.51e-10;3!CL:0000187;3.16e-10;55!CL:0000393;1.81e-08;61!CL:0000211;1.81e-08;61!CL:0002601;2.46e-08;1!CL:0000569;4.01e-08;4!CL:0002539;5.37e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.59e-30,32;CL:0000192,4.21e-26,43;CL:0000514,4.21e-26,43;CL:0002595,2.08e-24,5;CL:0000187,3.91e-23,55;CL:0000680,8.43e-22,58;CL:0000056,8.43e-22,58;CL:0000355,8.43e-22,58;CL:0000393,1.34e-20,61;CL:0000211,1.34e-20,61;CL:0002593,4.13e-16,2;CL:0002589,2.24e-15,2;CL:0002494,6.75e-11,16;CL:0002592,2.06e-10,3;CL:0000222,4.52e-09,121;CL:0002601,1.59e-08,1;CL:0000569,4.71e-08,4;CL:0000011,4.71e-08,4;CL:0002539,5.38e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;1.64e-21;43!CL:0000355;1.45e-09;58!UBERON:0003099;2.46e-08;1!UBERON:0003852;2.46e-08;1!CL:0000011;4.01e-08;4 | |||
|ontology_enrichment_disease=DOID:2394!2.05e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:0060085;2.46e-08;1!DOID:3165;2.46e-08;1!DOID:0060121;2.46e-08;1!DOID:2438;2.46e-08;1!DOID:4418;2.46e-08;1!DOID:0060072;6.25e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,2.13e-08,1;DOID:3165,2.13e-08,1;DOID:0060121,2.13e-08,1;DOID:2438,2.13e-08,1;DOID:4418,2.13e-08,1;DOID:0060072,6.47e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.19e-15!83;UBERON:0002329!1.19e-15!83;UBERON:0003077!1.19e-15!83;UBERON:0003059!1.19e-15!83;UBERON:0007282!1.19e-15!83;UBERON:0009618!1.19e-15!83;UBERON:0007285!1.19e-15!83;UBERON:0004290!2.03e-15!70;UBERON:0004573!2.45e-14!33;UBERON:0004571!2.45e-14!33;UBERON:0001134!3.14e-14!61;UBERON:0002036!3.14e-14!61;UBERON:0003082!3.14e-14!61;UBERON:0001637!1.18e-13!42;UBERON:0003509!1.18e-13!42;UBERON:0004572!1.18e-13!42;UBERON:0002385!1.39e-13!63;UBERON:0001015!1.39e-13!63;UBERON:0000383!1.39e-13!63;UBERON:0000486!3.70e-12!82;UBERON:0002119!3.40e-10!4;UBERON:0004531!3.40e-10!4;UBERON:0004872!6.92e-10!84;UBERON:0001981!2.63e-09!60;UBERON:0007500!2.63e-09!60;UBERON:0004537!2.63e-09!60;UBERON:0006965!2.63e-09!60;UBERON:0003834!3.08e-09!5;UBERON:0001533!3.08e-09!5;UBERON:0002049!1.51e-08!79;UBERON:0007798!1.51e-08!79;UBERON:0004535!2.08e-08!110;UBERON:0000992!4.52e-08!13;UBERON:0001009!5.15e-08!113;UBERON:0000055!1.68e-07!69;UBERON:0001778!3.13e-07!3;UBERON:0001775!3.13e-07!3;UBERON:0002097!7.29e-07!40;UBERON:0002199!8.86e-07!45;UBERON:0002416!8.86e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.27e-31;33!UBERON:0004571;2.27e-31;33!UBERON:0003834;2.07e-24;5!UBERON:0001533;2.07e-24;5!UBERON:0001637;1.95e-19;42!UBERON:0003509;1.95e-19;42!UBERON:0004572;1.95e-19;42!UBERON:0003513;1.69e-17;7!UBERON:0002456;4.12e-16;2!UBERON:0001529;2.99e-15;2!UBERON:0007204;2.99e-15;2!UBERON:0003498;1.51e-10;3!UBERON:0005985;1.51e-10;3!UBERON:0001621;1.51e-10;3!UBERON:0005705;2.46e-08;1!UBERON:0008193;2.46e-08;1!UBERON:0010912;2.46e-08;1!UBERON:0002514;2.46e-08;1!UBERON:0003457;2.46e-08;1!UBERON:0008907;2.46e-08;1!UBERON:0008001;2.46e-08;1!UBERON:0007213;2.46e-08;1!UBERON:0009891;2.46e-08;1!UBERON:0007914;2.46e-08;1!UBERON:0007375;2.46e-08;1!UBERON:0003323;2.46e-08;1!UBERON:0010258;2.46e-08;1!UBERON:0005253;2.46e-08;1!UBERON:0007842;2.46e-08;1!UBERON:0002397;2.46e-08;1!UBERON:0003113;2.46e-08;1!UBERON:0003277;2.46e-08;1!UBERON:0001709;2.46e-08;1!UBERON:0002244;2.46e-08;1!UBERON:0005620;2.46e-08;1!UBERON:0010364;2.46e-08;1!UBERON:0004288;2.46e-08;1!UBERON:0007500;4.01e-08;56!UBERON:0001981;4.01e-08;56!UBERON:0004537;4.01e-08;56!UBERON:0000948;5.85e-08;22!UBERON:0000055;3.95e-07;65!UBERON:0004237;5.37e-07;10!UBERON:0004695;5.37e-07;10!UBERON:0002111;5.37e-07;10!UBERON:0004178;5.37e-07;10!UBERON:0007100;5.61e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,8.46e-35,33;UBERON:0004571,8.46e-35,33;UBERON:0001637,7.90e-27,42;UBERON:0003509,7.90e-27,42;UBERON:0004572,7.90e-27,42;UBERON:0003834,2.08e-24,5;UBERON:0001533,2.08e-24,5;UBERON:0001134,3.19e-20,62;UBERON:0002036,3.19e-20,62;UBERON:0003082,3.19e-20,62;UBERON:0002385,1.65e-19,64;UBERON:0001015,1.65e-19,64;UBERON:0000383,1.65e-19,64;UBERON:0007524,2.41e-19,73;UBERON:0004872,3.35e-19,83;UBERON:0007500,2.12e-18,59;UBERON:0001981,2.12e-18,59;UBERON:0004537,2.12e-18,59;UBERON:0006965,2.12e-18,59;UBERON:0003513,1.69e-17,7;UBERON:0002329,2.53e-17,71;UBERON:0003059,2.53e-17,71;UBERON:0007282,2.53e-17,71;UBERON:0004290,2.53e-17,71;UBERON:0009618,2.53e-17,71;UBERON:0003077,4.80e-17,72;UBERON:0007285,4.80e-17,72;UBERON:0002456,4.13e-16,2;UBERON:0000055,1.21e-15,68;UBERON:0007503,1.57e-15,78;UBERON:0001529,2.24e-15,2;UBERON:0007204,2.24e-15,2;UBERON:0000486,1.96e-14,83;UBERON:0004535,6.93e-14,109;UBERON:0001009,1.97e-13,112;UBERON:0002049,2.52e-13,78;UBERON:0007798,2.52e-13,78;UBERON:0003914,1.00e-12,117;UBERON:0001621,2.06e-10,3;UBERON:0002204,4.15e-09,167;UBERON:0005256,5.64e-09,122;UBERON:0005705,3.53e-08,1;UBERON:0008193,3.53e-08,1;UBERON:0010912,3.53e-08,1;UBERON:0002514,3.53e-08,1;UBERON:0003457,3.53e-08,1;UBERON:0008907,3.53e-08,1;UBERON:0008001,3.53e-08,1;UBERON:0007213,3.53e-08,1;UBERON:0009891,3.53e-08,1;UBERON:0007914,3.53e-08,1;UBERON:0009292,3.53e-08,1;UBERON:0003099,3.53e-08,1;UBERON:0007375,3.53e-08,1;UBERON:0003323,3.53e-08,1;UBERON:0010258,3.53e-08,1;UBERON:0007842,3.53e-08,1;UBERON:0009494,3.53e-08,1;UBERON:0010042,3.53e-08,1;UBERON:0010045,3.53e-08,1;UBERON:0010259,3.53e-08,1;UBERON:0010359,3.53e-08,1;UBERON:0009526,3.53e-08,1;UBERON:0002397,3.53e-08,1;UBERON:0003113,3.53e-08,1;UBERON:0003277,3.53e-08,1;UBERON:0001709,3.53e-08,1;UBERON:0004066,3.53e-08,1;UBERON:0002244,3.53e-08,1;UBERON:0005620,3.53e-08,1;UBERON:0004362,3.53e-08,1;UBERON:0010364,3.53e-08,1;UBERON:0010046,3.53e-08,1;UBERON:0005868,3.53e-08,1;UBERON:0007238,3.53e-08,1;UBERON:0004288,3.53e-08,1;UBERON:0004068,3.53e-08,1;UBERON:0010334,3.53e-08,1;UBERON:0003852,3.53e-08,1;UBERON:0010253,3.53e-08,1;UBERON:0000490,3.72e-08,148;UBERON:0003081,5.38e-08,203;UBERON:0000926,7.70e-08,315;UBERON:0004120,7.70e-08,315;UBERON:0006603,7.70e-08,315;UBERON:0003104,2.82e-07,160;UBERON:0009142,2.82e-07,160;UBERON:0000948,3.37e-07,24;UBERON:0005498,3.37e-07,24;UBERON:0004140,3.37e-07,24;UBERON:0009881,3.37e-07,24;UBERON:0004141,3.37e-07,24;UBERON:0003084,3.37e-07,24;UBERON:0007005,3.37e-07,24;UBERON:0004139,3.37e-07,24;UBERON:0004291,3.37e-07,24;UBERON:0004237,5.38e-07,10;UBERON:0004695,5.38e-07,10;UBERON:0002111,5.38e-07,10;UBERON:0004178,5.38e-07,10 | |||
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| ||
|short_description=p@chr3:67141193..67141198,+ | |||
}} | }} |
Latest revision as of 23:17, 29 July 2015
Short description: | p@chr3:67141193..67141198, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:67141193..67141198, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.59e-30 | 32 |
smooth muscle cell | 4.21e-26 | 43 |
smooth muscle myoblast | 4.21e-26 | 43 |
smooth muscle cell of the subclavian artery | 2.08e-24 | 5 |
muscle cell | 3.91e-23 | 55 |
muscle precursor cell | 8.43e-22 | 58 |
myoblast | 8.43e-22 | 58 |
multi-potent skeletal muscle stem cell | 8.43e-22 | 58 |
electrically responsive cell | 1.34e-20 | 61 |
electrically active cell | 1.34e-20 | 61 |
smooth muscle cell of the internal thoracic artery | 4.13e-16 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 2.24e-15 | 2 |
cardiocyte | 6.75e-11 | 16 |
smooth muscle cell of the coronary artery | 2.06e-10 | 3 |
mesodermal cell | 4.52e-09 | 121 |
uterine smooth muscle cell | 1.59e-08 | 1 |
cardiac mesenchymal cell | 4.71e-08 | 4 |
migratory trunk neural crest cell | 4.71e-08 | 4 |
aortic smooth muscle cell | 5.38e-07 | 10 |
Ontology term | p-value | n |
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