FFCP PHASE1:Hg19::chr3:47422286..47422316,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=172bp_to_BC036224_5end | |||
|cluster_id=chr3:47422286..47422316,- | |||
|coexpression_cluster_id=C647 | |||
|description=CAGE_peak_1_at_BC036224_5end | |||
|id=chr3:47422286..47422316,- | |||
|ontology_enrichment_celltype=CL:0000738!5.81e-11!140;CL:0000988!6.07e-11!182;CL:0000037!7.71e-11!172;CL:0000566!7.71e-11!172;CL:0002032!1.30e-09!165;CL:0000837!1.30e-09!165;CL:0002031!1.49e-09!124;CL:0002087!3.48e-09!119;CL:0000838!1.31e-07!52;CL:0000542!1.85e-07!53;CL:0000051!1.85e-07!53 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.51e-09,136;CL:0000037,7.81e-09,168;CL:0000988,1.07e-08,177;CL:0002032,3.65e-08,161;CL:0000837,3.65e-08,161;CL:0002031,4.37e-07,120;CL:0000838,9.17e-07,52 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.71e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.29e-29!57;UBERON:0005068!5.29e-29!57;UBERON:0006241!5.29e-29!57;UBERON:0007135!5.29e-29!57;UBERON:0007023!2.54e-28!115;UBERON:0002616!2.06e-24!59;UBERON:0002780!3.22e-22!41;UBERON:0001890!3.22e-22!41;UBERON:0006240!3.22e-22!41;UBERON:0003080!3.94e-22!42;UBERON:0000955!5.68e-22!69;UBERON:0006238!5.68e-22!69;UBERON:0001017!1.57e-20!82;UBERON:0005743!2.94e-20!86;UBERON:0000073!4.47e-19!94;UBERON:0001016!4.47e-19!94;UBERON:0002020!7.99e-18!34;UBERON:0003528!7.99e-18!34;UBERON:0001893!9.80e-18!34;UBERON:0002791!3.44e-17!33;UBERON:0003075!1.38e-16!86;UBERON:0007284!1.38e-16!86;UBERON:0001869!1.92e-16!32;UBERON:0002346!2.32e-16!90;UBERON:0003056!1.95e-12!61;UBERON:0000956!3.36e-12!25;UBERON:0000203!3.36e-12!25;UBERON:0002619!4.87e-12!22;UBERON:0001950!8.52e-11!20;UBERON:0000153!1.47e-10!129;UBERON:0007811!1.47e-10!129;UBERON:0000033!3.78e-10!123;UBERON:0003076!5.25e-08!15;UBERON:0003057!5.25e-08!15;UBERON:0002420!2.65e-07!9;UBERON:0007245!2.65e-07!9;UBERON:0010009!2.65e-07!9;UBERON:0010011!2.65e-07!9;UBERON:0000454!2.65e-07!9;UBERON:0002308!2.90e-07!9;UBERON:0000125!2.90e-07!9;UBERON:0000924!3.31e-07!173;UBERON:0006601!3.31e-07!173;UBERON:0004121!3.91e-07!169;UBERON:0004732!5.49e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.30e-27;41!UBERON:0001890;3.30e-27;41!UBERON:0003528;8.04e-26;34!UBERON:0002020;8.04e-26;34!UBERON:0001893;9.36e-26;34!UBERON:0000073;9.71e-26;53!UBERON:0002616;9.71e-26;53!UBERON:0002791;3.73e-25;32!UBERON:0001869;6.77e-25;32!UBERON:0002619;1.88e-20;22!UBERON:0000956;2.85e-20;25!UBERON:0000203;2.85e-20;25!UBERON:0001950;2.62e-18;20!UBERON:0000955;1.11e-16;68!UBERON:0001017;2.22e-14;75!UBERON:0001016;1.71e-12;83!UBERON:0002420;1.38e-11;9!UBERON:0007245;1.38e-11;9!UBERON:0010009;1.38e-11;9!UBERON:0010011;1.38e-11;9!UBERON:0000454;1.38e-11;9!UBERON:0000125;1.51e-11;9!UBERON:0002308;1.51e-11;9!UBERON:0007023;6.32e-11;114!UBERON:0009663;2.31e-09;7!UBERON:0001894;2.53e-09;7!UBERON:0004732;8.08e-09;13!UBERON:0002298;7.14e-08;6!UBERON:0000200;8.69e-08;6!UBERON:0004733;8.72e-08;12!UBERON:0002028;8.72e-08;12!UBERON:0000349;5.41e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.93e-47,56;UBERON:0005068,2.93e-47,56;UBERON:0006241,2.93e-47,56;UBERON:0007135,2.93e-47,56;UBERON:0000073,3.58e-44,53;UBERON:0002616,3.58e-44,53;UBERON:0002780,8.53e-38,41;UBERON:0001890,8.53e-38,41;UBERON:0003080,8.53e-38,41;UBERON:0006240,8.53e-38,41;UBERON:0000955,2.98e-34,68;UBERON:0006238,2.98e-34,68;UBERON:0003075,1.54e-33,82;UBERON:0007284,1.54e-33,82;UBERON:0002346,2.65e-32,86;UBERON:0007023,5.24e-32,114;UBERON:0001017,3.10e-31,81;UBERON:0003528,4.12e-30,34;UBERON:0002020,4.12e-30,34;UBERON:0001893,5.89e-30,34;UBERON:0001016,1.65e-28,89;UBERON:0002791,6.50e-28,32;UBERON:0001869,1.07e-27,32;UBERON:0003056,2.56e-24,61;UBERON:0010371,4.57e-23,104;UBERON:0002619,8.57e-21,22;UBERON:0000956,2.73e-20,25;UBERON:0000203,2.73e-20,25;UBERON:0010314,5.65e-19,132;UBERON:0001950,1.30e-18,20;UBERON:0004121,1.73e-12,171;UBERON:0000924,1.73e-12,171;UBERON:0006601,1.73e-12,171;UBERON:0002420,1.52e-11,9;UBERON:0007245,1.52e-11,9;UBERON:0010009,1.52e-11,9;UBERON:0010011,1.52e-11,9;UBERON:0000454,1.52e-11,9;UBERON:0000125,1.77e-11,9;UBERON:0002308,1.77e-11,9;UBERON:0003076,1.58e-10,15;UBERON:0003057,1.58e-10,15;UBERON:0009663,2.63e-09,7;UBERON:0001894,2.73e-09,7;UBERON:0006222,2.73e-09,7;UBERON:0004732,8.16e-09,13;UBERON:0002298,6.79e-08,6;UBERON:0000200,7.89e-08,6;UBERON:0004733,8.70e-08,12;UBERON:0002028,8.70e-08,12;UBERON:0007277,8.70e-08,12;UBERON:0011216,3.61e-07,223;UBERON:0000349,5.10e-07,5 | |||
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| |||
|short_description=p1@BC036224 | |||
}} |
Latest revision as of 21:33, 29 July 2015
Short description: | p1@BC036224 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC036224_5end |
Coexpression cluster: | C647_pineal_cerebellum_pituitary_occipital_parietal_medial_hippocampus |
Association with transcript: | 172bp_to_BC036224_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 7.51e-09 | 136 |
hematopoietic stem cell | 7.81e-09 | 168 |
hematopoietic cell | 1.07e-08 | 177 |
hematopoietic oligopotent progenitor cell | 3.65e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.65e-08 | 161 |
hematopoietic lineage restricted progenitor cell | 4.37e-07 | 120 |
lymphoid lineage restricted progenitor cell | 9.17e-07 | 52 |