FFCP PHASE1:Hg19::chr3:46465152..46465163,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:46465152..46465163,- | |||
|description=CAGE_peak_at_chr3:46465152..46465163,- | |description=CAGE_peak_at_chr3:46465152..46465163,- | ||
|id=chr3:46465152..46465163,- | |id=chr3:46465152..46465163,- | ||
|ontology_enrichment_celltype=CL:0000159!1.28e-12!2;CL:0000077!1.05e-07!19;CL:0000076!1.43e-07!62;CL:0000319!1.86e-07!1;CL:0000066!3.43e-07!254;CL:0000313!7.73e-07!1 | |ontology_enrichment_celltype=CL:0000159!1.28e-12!2;CL:0000077!1.05e-07!19;CL:0000076!1.43e-07!62;CL:0000319!1.86e-07!1;CL:0000066!3.43e-07!254;CL:0000313!7.73e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000319;3.25e-19;1!CL:0000159;2.72e-10;2!CL:0000077;3.52e-09;19!CL:0002586;2.79e-07;3 | |ontology_enrichment_celltype_v019=CL:0000319;3.25e-19;1!CL:0000159;2.72e-10;2!CL:0000077;3.52e-09;19!CL:0002586;2.79e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000319,1.88e-19,1;CL:0000159,2.07e-10,2;CL:0000077,3.43e-09,19;CL:0002586,3.16e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!2.29e-14!14;DOID:120!1.38e-12!27;DOID:193!1.23e-11!29;DOID:305!5.09e-09!106;DOID:299!5.88e-08!25;DOID:3111!1.65e-07!1;DOID:3603!1.65e-07!1;DOID:3030!1.86e-07!1;DOID:162!3.63e-07!235;DOID:14566!6.32e-07!239;DOID:0050687!6.67e-07!143;DOID:2152!7.73e-07!1 | |ontology_enrichment_disease=DOID:2394!2.29e-14!14;DOID:120!1.38e-12!27;DOID:193!1.23e-11!29;DOID:305!5.09e-09!106;DOID:299!5.88e-08!25;DOID:3111!1.65e-07!1;DOID:3603!1.65e-07!1;DOID:3030!1.86e-07!1;DOID:162!3.63e-07!235;DOID:14566!6.32e-07!239;DOID:0050687!6.67e-07!143;DOID:2152!7.73e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:3111;1.30e-19;1!DOID:3603;1.30e-19;1!DOID:3030;3.25e-19;1!DOID:299;5.86e-12;25!DOID:4468;1.43e-10;2!DOID:4929;2.72e-10;2 | |ontology_enrichment_disease_v019=DOID:3111;1.30e-19;1!DOID:3603;1.30e-19;1!DOID:3030;3.25e-19;1!DOID:299;5.86e-12;25!DOID:4468;1.43e-10;2!DOID:4929;2.72e-10;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3111,1.30e-19,1;DOID:3603,1.30e-19,1;DOID:3030,1.88e-19,1;DOID:299,5.54e-12,25;DOID:4468,1.43e-10,2;DOID:4929,2.99e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0002394!1.23e-13!4;UBERON:0003928!1.23e-13!4;UBERON:0000992!4.59e-11!13;UBERON:0002294!5.37e-08!7;UBERON:0001173!5.37e-08!7;UBERON:0004912!5.37e-08!7;UBERON:0004913!2.37e-07!1;UBERON:0003703!2.37e-07!1;UBERON:0001174!2.37e-07!1;UBERON:0004914!2.37e-07!1;UBERON:0001282!2.67e-07!1;UBERON:0009842!2.67e-07!1;UBERON:0003704!2.67e-07!1;UBERON:0001171!2.67e-07!1;UBERON:0001172!2.67e-07!1;UBERON:0004911!7.73e-07!1;UBERON:0000991!9.47e-07!21;UBERON:0009196!9.47e-07!21;UBERON:0009117!9.47e-07!21;UBERON:0005564!9.47e-07!21 | |ontology_enrichment_uberon=UBERON:0002394!1.23e-13!4;UBERON:0003928!1.23e-13!4;UBERON:0000992!4.59e-11!13;UBERON:0002294!5.37e-08!7;UBERON:0001173!5.37e-08!7;UBERON:0004912!5.37e-08!7;UBERON:0004913!2.37e-07!1;UBERON:0003703!2.37e-07!1;UBERON:0001174!2.37e-07!1;UBERON:0004914!2.37e-07!1;UBERON:0001282!2.67e-07!1;UBERON:0009842!2.67e-07!1;UBERON:0003704!2.67e-07!1;UBERON:0001171!2.67e-07!1;UBERON:0001172!2.67e-07!1;UBERON:0004911!7.73e-07!1;UBERON:0000991!9.47e-07!21;UBERON:0009196!9.47e-07!21;UBERON:0009117!9.47e-07!21;UBERON:0005564!9.47e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;3.25e-19;1!UBERON:0004913;3.25e-19;1!UBERON:0009842;3.25e-19;1!UBERON:0003703;3.25e-19;1!UBERON:0003704;3.25e-19;1!UBERON:0001171;3.25e-19;1!UBERON:0001172;3.25e-19;1!UBERON:0001174;3.25e-19;1!UBERON:0004914;3.25e-19;1!UBERON:0002394;7.41e-19;4!UBERON:0003928;7.41e-19;4!UBERON:0002294;3.30e-11;7!UBERON:0001173;3.30e-11;7!UBERON:0000058;4.04e-08;10!UBERON:0001781;2.79e-07;3!UBERON:0001782;2.79e-07;3!UBERON:0002114;2.79e-07;2!UBERON:0001280;2.79e-07;3!UBERON:0004647;2.79e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0001282;3.25e-19;1!UBERON:0004913;3.25e-19;1!UBERON:0009842;3.25e-19;1!UBERON:0003703;3.25e-19;1!UBERON:0003704;3.25e-19;1!UBERON:0001171;3.25e-19;1!UBERON:0001172;3.25e-19;1!UBERON:0001174;3.25e-19;1!UBERON:0004914;3.25e-19;1!UBERON:0002394;7.41e-19;4!UBERON:0003928;7.41e-19;4!UBERON:0002294;3.30e-11;7!UBERON:0001173;3.30e-11;7!UBERON:0000058;4.04e-08;10!UBERON:0001781;2.79e-07;3!UBERON:0001782;2.79e-07;3!UBERON:0002114;2.79e-07;2!UBERON:0001280;2.79e-07;3!UBERON:0004647;2.79e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,3.91e-19,1;UBERON:0003703,3.91e-19,1;UBERON:0001174,3.91e-19,1;UBERON:0004914,3.91e-19,1;UBERON:0001282,5.62e-19,1;UBERON:0009842,5.62e-19,1;UBERON:0003704,5.62e-19,1;UBERON:0001171,5.62e-19,1;UBERON:0001172,5.62e-19,1;UBERON:0002394,8.27e-13,6;UBERON:0003928,8.27e-13,6;UBERON:0002294,7.45e-09,9;UBERON:0001173,7.45e-09,9;UBERON:0004912,7.45e-09,9;UBERON:0002114,2.97e-07,2;UBERON:0001782,3.16e-07,3;UBERON:0005424,3.16e-07,3;UBERON:0001280,3.35e-07,3;UBERON:0004647,3.35e-07,3;UBERON:0005171,3.35e-07,3 | |||
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|short_description=p@chr3:46465152..46465163,- | |short_description=p@chr3:46465152..46465163,- | ||
}} | }} |
Latest revision as of 21:26, 29 July 2015
Short description: | p@chr3:46465152..46465163, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:46465152..46465163, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 1.88e-19 | 1 |
seromucus secreting cell | 2.07e-10 | 2 |
mesothelial cell | 3.43e-09 | 19 |
retinal pigment epithelial cell | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 3.91e-19 | 1 |
extrahepatic bile duct | 3.91e-19 | 1 |
common bile duct | 3.91e-19 | 1 |
duodenal papilla | 3.91e-19 | 1 |
intralobular bile duct | 5.62e-19 | 1 |
acinus | 5.62e-19 | 1 |
intrahepatic bile duct | 5.62e-19 | 1 |
portal lobule | 5.62e-19 | 1 |
hepatic acinus | 5.62e-19 | 1 |
bile duct | 8.27e-13 | 6 |
digestive system duct | 8.27e-13 | 6 |
biliary system | 7.45e-09 | 9 |
biliary tree | 7.45e-09 | 9 |
biliary bud | 7.45e-09 | 9 |
duodenum | 2.97e-07 | 2 |
pigmented layer of retina | 3.16e-07 | 3 |
presumptive retinal pigmented epithelium | 3.16e-07 | 3 |
liver parenchyma | 3.35e-07 | 3 |
liver lobule | 3.35e-07 | 3 |
hepatic duct | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 1.30e-19 | 1 |
mucinous cystadenocarcinoma | 1.30e-19 | 1 |
mucinous adenocarcinoma | 1.88e-19 | 1 |
adenocarcinoma | 5.54e-12 | 25 |
clear cell adenocarcinoma | 1.43e-10 | 2 |
tubular adenocarcinoma | 2.99e-10 | 2 |