FFCP PHASE1:Hg19::chr3:42515163..42515178,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:42515163..42515178,- | |||
|coexpression_cluster_id=C1926 | |||
|description=CAGE_peak_at_chr3:42515163..42515178,- | |||
|id=chr3:42515163..42515178,- | |||
|ontology_enrichment_celltype=CL:0002139!9.46e-17!24;CL:0000071!8.33e-14!18;CL:0002546!8.33e-14!18;CL:0000115!1.80e-10!35;CL:0002494!1.03e-09!16;CL:0000222!1.30e-09!119;CL:0002078!3.89e-09!44;CL:0002618!7.71e-09!3;CL:0000359!6.75e-08!32;CL:0002543!1.34e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000511;2.37e-29;1!CL:0002625;2.37e-29;1!CL:0000216;2.37e-29;1!CL:1000415;2.05e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.33e-29,1;CL:0002625,1.33e-29,1;CL:0000216,1.33e-29,1;CL:1000415,1.78e-15,2 | |||
|ontology_enrichment_development_v019=UBERON:0005754;9.98e-30;1!UBERON:0007297;1.33e-15;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4231;1.15e-15;2!DOID:1907;1.15e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4231,1.15e-15,2;DOID:1907,1.15e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0004872!3.66e-28!84;UBERON:0004535!3.89e-22!110;UBERON:0000055!1.39e-21!69;UBERON:0001009!2.74e-21!113;UBERON:0002049!4.38e-21!79;UBERON:0007798!4.38e-21!79;UBERON:0003914!3.06e-20!118;UBERON:0001981!7.23e-20!60;UBERON:0007500!7.23e-20!60;UBERON:0004537!7.23e-20!60;UBERON:0006965!7.23e-20!60;UBERON:0000477!3.15e-15!286;UBERON:0001986!8.33e-14!18;UBERON:0004638!8.33e-14!18;UBERON:0004852!8.33e-14!18;UBERON:0000490!1.21e-13!138;UBERON:0000487!2.22e-13!22;UBERON:0004111!3.19e-13!241;UBERON:0000025!3.97e-13!194;UBERON:0001637!9.43e-13!42;UBERON:0003509!9.43e-13!42;UBERON:0004572!9.43e-13!42;UBERON:0000483!1.54e-11!309;UBERON:0006914!1.84e-11!25;UBERON:0000119!2.64e-11!312;UBERON:0004573!2.67e-09!33;UBERON:0004571!2.67e-09!33;UBERON:0000948!3.55e-09!24;UBERON:0005498!3.55e-09!24;UBERON:0004140!3.55e-09!24;UBERON:0009881!3.55e-09!24;UBERON:0004141!3.55e-09!24;UBERON:0003084!3.55e-09!24;UBERON:0007005!3.55e-09!24;UBERON:0004139!3.55e-09!24;UBERON:0004291!3.55e-09!24;UBERON:0002066!1.03e-08!5;UBERON:0007100!6.28e-08!27;UBERON:0001048!8.07e-08!168;UBERON:0001638!2.64e-07!9;UBERON:0003920!2.64e-07!9;UBERON:0004582!2.64e-07!9;UBERON:0002294!9.41e-07!7;UBERON:0001173!9.41e-07!7;UBERON:0004912!9.41e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;9.98e-30;1!UBERON:0006868;9.98e-30;1!UBERON:0001136;2.37e-29;1!UBERON:0001343;2.37e-29;1!UBERON:0004910;2.37e-29;1!UBERON:0004813;2.37e-29;1!UBERON:0005904;3.16e-29;4!UBERON:0004909;2.05e-15;2!UBERON:0000473;3.53e-15;8!UBERON:0000991;7.43e-13;21!UBERON:0000058;2.37e-12;10!UBERON:0003135;2.55e-11;11!UBERON:0006947;7.42e-11;3!UBERON:0004054;7.42e-11;3!UBERON:0002110;9.90e-11;3!UBERON:0002323;1.14e-08;45!UBERON:0002118;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,9.99e-30,1;UBERON:0006868,9.99e-30,1;UBERON:0001136,1.33e-29,1;UBERON:0001343,1.33e-29,1;UBERON:0004910,1.33e-29,1;UBERON:0005154,1.33e-29,1;UBERON:0005295,1.33e-29,1;UBERON:0004813,1.33e-29,1;UBERON:0005297,1.33e-29,1;UBERON:0005294,1.33e-29,1;UBERON:0010141,1.33e-29,1;UBERON:0005891,1.33e-29,1;UBERON:0005904,2.37e-29,4;UBERON:0004909,1.54e-15,2;UBERON:0000473,3.06e-15,8;UBERON:0000991,6.85e-13,21;UBERON:0009196,6.85e-13,21;UBERON:0009117,6.85e-13,21;UBERON:0005564,6.85e-13,21;UBERON:0004176,2.44e-12,22;UBERON:0003135,2.30e-11,11;UBERON:0004876,2.30e-11,11;UBERON:0006947,7.42e-11,3;UBERON:0004054,7.42e-11,3;UBERON:0002110,8.99e-11,3;UBERON:0006242,8.99e-11,3;UBERON:0002323,2.27e-10,46;UBERON:0004458,9.18e-10,49;UBERON:0003886,6.69e-09,54;UBERON:0002553,6.28e-08,61;UBERON:0000058,5.66e-07,19;UBERON:0002118,6.04e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0.79504962946682,0,1.04142150482278,0.56530794192401,0.838998872419812,0,0,0,0.35576626268671,0.66944122552934,0.402829317109147,0.760272105718513,0,0,0,0.982297011124877,0.673588117878509,0.112611480483322,0,0,0.732806975721629,0,0,0,0,0.379891534993739,0.132409180813219,0,0,0,0,0.49333509683432,0,0.538842688278752,0.980771418680752,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0.37064843820784,0.143124886741991,0,0.316379424718726,0,0,0,0,0.78494864019923,0,0,0,0.606547444719948,0,0.842516912477962,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.405820753925408,0,0,0.143411352204052,0,0.7133421029625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.222617410045812,0,0,0,0,0,0.613612095012929,0,0,0.718946809178615,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0.683652335082007,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0.816164040795739,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0.411125773940253,0,0.126621591911757,0,1.60317640503067,0.426905989478705,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0.0671834724867263,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570930667089935,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0.15543720058278,0.443565449968902,0.477890301491107,0,0,0,0,0,0,0,0,1.45478927362048,0,0.464033759878494,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,27.808281724775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11693525095465,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0.375935671919414,0.128915775947154,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:42515163..42515178,- | |||
}} |
Latest revision as of 21:00, 29 July 2015
Short description: | p@chr3:42515163..42515178, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:42515163..42515178, - |
Coexpression cluster: | C1926_myxofibrosarcoma_Smooth_mesodermal_Multipotent_Fibroblast_basal_papillary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.33e-29 | 1 |
seminiferous tubule epithelial cell | 1.33e-29 | 1 |
Sertoli cell | 1.33e-29 | 1 |
epithelial cell of gall bladder | 1.78e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 9.99e-30 | 1 |
seminal fluid secreting gland | 9.99e-30 | 1 |
mesothelium | 1.33e-29 | 1 |
seminiferous tubule of testis | 1.33e-29 | 1 |
epithelium of male gonad | 1.33e-29 | 1 |
epithelial cord | 1.33e-29 | 1 |
sex cord | 1.33e-29 | 1 |
seminiferous tubule epithelium | 1.33e-29 | 1 |
testis sex cord | 1.33e-29 | 1 |
genital ridge | 1.33e-29 | 1 |
primitive sex cord of indifferent gonad | 1.33e-29 | 1 |
coelomic epithelium | 1.33e-29 | 1 |
duct of male reproductive system | 2.37e-29 | 4 |
epithelium of gonad | 1.54e-15 | 2 |
testis | 3.06e-15 | 8 |
gonad | 6.85e-13 | 21 |
indifferent external genitalia | 6.85e-13 | 21 |
indifferent gonad | 6.85e-13 | 21 |
gonad primordium | 6.85e-13 | 21 |
external genitalia | 2.44e-12 | 22 |
male reproductive organ | 2.30e-11 | 11 |
urogenital ridge | 2.30e-11 | 11 |
male genital duct | 7.42e-11 | 3 |
internal male genitalia | 7.42e-11 | 3 |
gallbladder | 8.99e-11 | 3 |
gall bladder primordium | 8.99e-11 | 3 |
body cavity | 2.27e-10 | 46 |
body cavity or lining | 9.18e-10 | 49 |
body cavity precursor | 6.69e-09 | 54 |
anatomical cavity | 6.28e-08 | 61 |
duct | 5.66e-07 | 19 |
right ovary | 6.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 1.15e-15 | 2 |
malignant fibroxanthoma | 1.15e-15 | 2 |