FFCP PHASE1:Hg19::chr3:42515163..42515178,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:42515163..42515178,- | |||
|coexpression_cluster_id=C1926 | |coexpression_cluster_id=C1926 | ||
|description=CAGE_peak_at_chr3:42515163..42515178,- | |description=CAGE_peak_at_chr3:42515163..42515178,- | ||
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|ontology_enrichment_celltype_v019_2=CL:0000511,1.33e-29,1;CL:0002625,1.33e-29,1;CL:0000216,1.33e-29,1;CL:1000415,1.78e-15,2 | |||
|ontology_enrichment_development_v019=UBERON:0005754;9.98e-30;1!UBERON:0007297;1.33e-15;2 | |ontology_enrichment_development_v019=UBERON:0005754;9.98e-30;1!UBERON:0007297;1.33e-15;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4231;1.15e-15;2!DOID:1907;1.15e-15;2 | |ontology_enrichment_disease_v019=DOID:4231;1.15e-15;2!DOID:1907;1.15e-15;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4231,1.15e-15,2;DOID:1907,1.15e-15,2 | |||
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| ||
|short_description=p@chr3:42515163..42515178,- | |short_description=p@chr3:42515163..42515178,- | ||
}} | }} |
Latest revision as of 21:00, 29 July 2015
Short description: | p@chr3:42515163..42515178, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:42515163..42515178, - |
Coexpression cluster: | C1926_myxofibrosarcoma_Smooth_mesodermal_Multipotent_Fibroblast_basal_papillary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.33e-29 | 1 |
seminiferous tubule epithelial cell | 1.33e-29 | 1 |
Sertoli cell | 1.33e-29 | 1 |
epithelial cell of gall bladder | 1.78e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 9.99e-30 | 1 |
seminal fluid secreting gland | 9.99e-30 | 1 |
mesothelium | 1.33e-29 | 1 |
seminiferous tubule of testis | 1.33e-29 | 1 |
epithelium of male gonad | 1.33e-29 | 1 |
epithelial cord | 1.33e-29 | 1 |
sex cord | 1.33e-29 | 1 |
seminiferous tubule epithelium | 1.33e-29 | 1 |
testis sex cord | 1.33e-29 | 1 |
genital ridge | 1.33e-29 | 1 |
primitive sex cord of indifferent gonad | 1.33e-29 | 1 |
coelomic epithelium | 1.33e-29 | 1 |
duct of male reproductive system | 2.37e-29 | 4 |
epithelium of gonad | 1.54e-15 | 2 |
testis | 3.06e-15 | 8 |
gonad | 6.85e-13 | 21 |
indifferent external genitalia | 6.85e-13 | 21 |
indifferent gonad | 6.85e-13 | 21 |
gonad primordium | 6.85e-13 | 21 |
external genitalia | 2.44e-12 | 22 |
male reproductive organ | 2.30e-11 | 11 |
urogenital ridge | 2.30e-11 | 11 |
male genital duct | 7.42e-11 | 3 |
internal male genitalia | 7.42e-11 | 3 |
gallbladder | 8.99e-11 | 3 |
gall bladder primordium | 8.99e-11 | 3 |
body cavity | 2.27e-10 | 46 |
body cavity or lining | 9.18e-10 | 49 |
body cavity precursor | 6.69e-09 | 54 |
anatomical cavity | 6.28e-08 | 61 |
duct | 5.66e-07 | 19 |
right ovary | 6.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 1.15e-15 | 2 |
malignant fibroxanthoma | 1.15e-15 | 2 |