FFCP PHASE1:Hg19::chr3:2141827..2141844,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:2141827..2141844,- | |||
|coexpression_cluster_id=C38 | |coexpression_cluster_id=C38 | ||
|description=CAGE_peak_at_chr3:2141827..2141844,- | |description=CAGE_peak_at_chr3:2141827..2141844,- | ||
|id=chr3:2141827..2141844,- | |id=chr3:2141827..2141844,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002253;5.15e-21;2!CL:0002563;3.26e-11;4!CL:0000138;5.54e-08;6!CL:0002149;6.55e-08;6!CL:0002255;6.55e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,3.81e-21,2;CL:0002563,2.80e-11,4;CL:0000058,5.54e-08,6;CL:0000138,5.54e-08,6;CL:0002149,7.25e-08,6;CL:0002255,7.25e-08,6;CL:0000223,6.40e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0007123;3.10e-09;5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;6.62e-41;1!DOID:4549;6.62e-41;1!DOID:5861;6.62e-41;1!DOID:6496;6.62e-41;1!DOID:201;5.54e-08;6!DOID:0060100;5.54e-08;6!DOID:3001;6.55e-08;6!DOID:299;2.43e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,6.62e-41,1;DOID:4549,6.62e-41,1;DOID:5861,6.62e-41,1;DOID:6496,6.62e-41,1;DOID:201,5.54e-08,6;DOID:0060100,5.54e-08,6;DOID:3001,7.25e-08,6;DOID:299,2.43e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.74e-13!115;UBERON:0000200!2.33e-12!6;UBERON:0001871!2.45e-09!7;UBERON:0002771!3.72e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!6.74e-13!115;UBERON:0000200!2.33e-12!6;UBERON:0001871!2.45e-09!7;UBERON:0002771!3.72e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002418;1.22e-14;3!UBERON:0004755;1.22e-14;3!UBERON:0001052;3.26e-11;4!UBERON:0001242;3.26e-11;4!UBERON:0001262;3.26e-11;4!UBERON:0004786;3.26e-11;4!UBERON:0004808;3.26e-11;4!UBERON:0001277;3.26e-11;4!UBERON:0002046;3.10e-09;5!UBERON:0004907;3.10e-09;5!UBERON:0000485;5.86e-07;7!UBERON:0003929;5.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,1.22e-14,3;UBERON:0004755,1.22e-14,3;UBERON:0001052,2.80e-11,4;UBERON:0001242,2.80e-11,4;UBERON:0001262,2.80e-11,4;UBERON:0004786,2.80e-11,4;UBERON:0004808,2.80e-11,4;UBERON:0001277,2.80e-11,4;UBERON:0004907,2.74e-09,5;UBERON:0002046,2.97e-09,5;UBERON:0004117,2.97e-09,5;UBERON:0007689,2.97e-09,5;UBERON:0007123,2.97e-09,5;UBERON:0003091,2.97e-09,5;UBERON:0003929,2.12e-07,54 | |||
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|short_description=p@chr3:2141827..2141844,- | |short_description=p@chr3:2141827..2141844,- | ||
}} | }} |
Latest revision as of 20:05, 29 July 2015
Short description: | p@chr3:2141827..2141844, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:2141827..2141844, - |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 3.81e-21 | 2 |
intestinal epithelial cell | 2.80e-11 | 4 |
chondroblast | 5.54e-08 | 6 |
chondrocyte | 5.54e-08 | 6 |
epithelial cell of uterus | 7.25e-08 | 6 |
stromal cell of endometrium | 7.25e-08 | 6 |
endodermal cell | 6.40e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 1.22e-14 | 3 |
skeletal tissue | 1.22e-14 | 3 |
rectum | 2.80e-11 | 4 |
intestinal mucosa | 2.80e-11 | 4 |
wall of intestine | 2.80e-11 | 4 |
gastrointestinal system mucosa | 2.80e-11 | 4 |
gastrointestinal system epithelium | 2.80e-11 | 4 |
intestinal epithelium | 2.80e-11 | 4 |
lower digestive tract | 2.74e-09 | 5 |
thyroid gland | 2.97e-09 | 5 |
pharyngeal pouch | 2.97e-09 | 5 |
thyroid diverticulum | 2.97e-09 | 5 |
pharyngeal pouch 2 | 2.97e-09 | 5 |
thyroid primordium | 2.97e-09 | 5 |
gut epithelium | 2.12e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 6.62e-41 | 1 |
extraosseous chondrosarcoma | 6.62e-41 | 1 |
myxoid chondrosarcoma | 6.62e-41 | 1 |
extraskeletal myxoid chondrosarcoma | 6.62e-41 | 1 |
connective tissue cancer | 5.54e-08 | 6 |
musculoskeletal system cancer | 5.54e-08 | 6 |
female reproductive endometrioid cancer | 7.25e-08 | 6 |
adenocarcinoma | 2.43e-07 | 25 |