FFCP PHASE1:Hg19::chr3:194868625..194868636,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=5bp_to_ENST00000426468_5end | |association_with_transcript=5bp_to_ENST00000426468_5end | ||
|cluster_id=chr3:194868625..194868636,+ | |||
|coexpression_cluster_id=C357 | |coexpression_cluster_id=C357 | ||
|description=CAGE_peak_2_at_ENST00000426468_5end | |description=CAGE_peak_2_at_ENST00000426468_5end | ||
|id=chr3:194868625..194868636,+ | |id=chr3:194868625..194868636,+ | ||
|ontology_enrichment_celltype=CL:0002139!7.99e-35!24;CL:0000071!4.66e-25!18;CL:0002546!4.66e-25!18;CL:0000115!4.62e-22!35;CL:0000213!3.20e-17!57;CL:0000215!3.20e-17!57;CL:0000945!1.82e-16!24;CL:0000826!1.82e-16!24;CL:0002078!2.08e-16!44;CL:0000542!1.72e-14!53;CL:0000051!1.72e-14!53;CL:0000838!2.96e-13!52;CL:1000413!3.01e-13!9;CL:0005020!2.30e-11!6;CL:0002138!2.30e-11!6;CL:0005022!2.30e-11!6;CL:0002544!4.82e-11!6;CL:0002144!7.92e-09!3;CL:0002618!8.98e-09!3;CL:0000898!2.15e-08!3;CL:0000076!2.63e-08!62;CL:0000784!2.67e-08!3;CL:0000236!6.35e-08!14;CL:0000624!4.66e-07!6;CL:0002543!5.80e-07!6 | |ontology_enrichment_celltype=CL:0002139!7.99e-35!24;CL:0000071!4.66e-25!18;CL:0002546!4.66e-25!18;CL:0000115!4.62e-22!35;CL:0000213!3.20e-17!57;CL:0000215!3.20e-17!57;CL:0000945!1.82e-16!24;CL:0000826!1.82e-16!24;CL:0002078!2.08e-16!44;CL:0000542!1.72e-14!53;CL:0000051!1.72e-14!53;CL:0000838!2.96e-13!52;CL:1000413!3.01e-13!9;CL:0005020!2.30e-11!6;CL:0002138!2.30e-11!6;CL:0005022!2.30e-11!6;CL:0002544!4.82e-11!6;CL:0002144!7.92e-09!3;CL:0002618!8.98e-09!3;CL:0000898!2.15e-08!3;CL:0000076!2.63e-08!62;CL:0000784!2.67e-08!3;CL:0000236!6.35e-08!14;CL:0000624!4.66e-07!6;CL:0002543!5.80e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;3.91e-65;24!CL:0002138;1.07e-39;6!CL:0000115;9.96e-36;36!CL:0000071;4.15e-33;18!CL:0002618;3.69e-29;3!CL:0002078;1.51e-22;45!CL:0000213;6.97e-16;58!CL:0000215;6.97e-16;58!CL:0002544;6.55e-15;6!CL:0002543;6.55e-15;6!CL:0002144;3.75e-14;3!CL:0000945;1.05e-13;24!CL:0000236;8.02e-12;13!CL:0000785;9.04e-11;1!CL:0000895;9.04e-11;1!CL:0000819;9.04e-11;1!CL:1000413;3.99e-10;9!CL:0000542;1.78e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.56e-65,24;CL:0000115,7.97e-43,36;CL:0005020,6.42e-40,6;CL:0002138,6.42e-40,6;CL:0005022,6.42e-40,6;CL:0002078,7.13e-34,45;CL:0000071,5.04e-33,18;CL:0002546,5.04e-33,18;CL:0002618,6.91e-29,3;CL:0000213,7.75e-26,58;CL:0000215,7.75e-26,58;CL:0002544,5.83e-15,6;CL:0002543,8.94e-15,6;CL:0002144,3.88e-14,3;CL:0000945,1.16e-13,24;CL:0000826,1.16e-13,24;CL:0000222,2.61e-11,121;CL:0000236,5.57e-11,14;CL:0000819,7.46e-11,1;CL:0000810,1.33e-10,1;CL:0000895,1.33e-10,1;CL:0002436,1.33e-10,1;CL:0002427,1.33e-10,1;CL:0002428,1.33e-10,1;CL:0002429,1.33e-10,1;CL:0002433,1.33e-10,1;CL:0002431,1.33e-10,1;CL:0002432,1.33e-10,1;CL:1000413,3.69e-10,9;CL:0000076,9.28e-09,63;CL:0000838,4.04e-08,52;CL:0000542,5.92e-08,53;CL:0000051,5.92e-08,53 | |||
|ontology_enrichment_development_v019=CL:0005022;1.07e-39;6!CL:0002546;4.15e-33;18!CL:0002427;9.04e-11;1!CL:0000051;1.78e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060073;9.04e-11;1!DOID:8675;9.04e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,7.46e-11,1;DOID:8675,7.46e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0001986!4.66e-25!18;UBERON:0004638!4.66e-25!18;UBERON:0004852!4.66e-25!18;UBERON:0000487!8.73e-20!22;UBERON:0006914!6.03e-17!25;UBERON:0003915!3.01e-13!9;UBERON:0004700!3.01e-13!9;UBERON:0001917!3.01e-13!9;UBERON:0000055!1.17e-09!69;UBERON:0002465!4.36e-09!10;UBERON:0001915!7.92e-09!3;UBERON:0001982!7.92e-09!3;UBERON:0001473!2.21e-08!8;UBERON:0004536!2.21e-08!8;UBERON:0006558!2.21e-08!8;UBERON:0004535!2.70e-08!110;UBERON:0001009!6.63e-08!113;UBERON:0002049!8.67e-08!79;UBERON:0007798!8.67e-08!79 | |ontology_enrichment_uberon=UBERON:0001986!4.66e-25!18;UBERON:0004638!4.66e-25!18;UBERON:0004852!4.66e-25!18;UBERON:0000487!8.73e-20!22;UBERON:0006914!6.03e-17!25;UBERON:0003915!3.01e-13!9;UBERON:0004700!3.01e-13!9;UBERON:0001917!3.01e-13!9;UBERON:0000055!1.17e-09!69;UBERON:0002465!4.36e-09!10;UBERON:0001915!7.92e-09!3;UBERON:0001982!7.92e-09!3;UBERON:0001473!2.21e-08!8;UBERON:0004536!2.21e-08!8;UBERON:0006558!2.21e-08!8;UBERON:0004535!2.70e-08!110;UBERON:0001009!6.63e-08!113;UBERON:0002049!8.67e-08!79;UBERON:0007798!8.67e-08!79 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.15e-33;18!UBERON:0001986;4.15e-33;18!UBERON:0004852;4.15e-33;18!UBERON:0001473;8.67e-30;8!UBERON:0004536;8.67e-30;8!UBERON:0006558;8.67e-30;8!UBERON:0000487;6.22e-27;22!UBERON:0002465;7.80e-24;10!UBERON:0006914;1.36e-23;25!UBERON:0002066;9.07e-18;5!UBERON:0000490;7.00e-15;33!UBERON:0010523;3.75e-14;3!UBERON:0001915;3.75e-14;3!UBERON:0001982;3.75e-14;3!UBERON:0000055;5.10e-14;65!UBERON:0001638;3.99e-10;9!UBERON:0010260;3.99e-10;9!UBERON:0003920;3.99e-10;9!UBERON:0003915;3.99e-10;9!UBERON:0004700;3.99e-10;9!UBERON:0001917;3.99e-10;9!UBERON:0004582;3.99e-10;9!UBERON:0002405;9.14e-09;27!UBERON:0002049;1.66e-08;75!UBERON:0007798;1.66e-08;75!UBERON:0007500;5.89e-08;56!UBERON:0001981;5.89e-08;56!UBERON:0004537;5.89e-08;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,5.04e-33,18;UBERON:0001986,5.04e-33,18;UBERON:0004852,5.04e-33,18;UBERON:0001473,5.91e-30,8;UBERON:0004536,5.91e-30,8;UBERON:0006558,5.91e-30,8;UBERON:0000487,7.29e-27,22;UBERON:0002465,5.75e-24,10;UBERON:0006914,1.56e-23,25;UBERON:0000055,9.66e-22,68;UBERON:0002049,1.08e-18,78;UBERON:0007798,1.08e-18,78;UBERON:0002066,1.32e-17,5;UBERON:0010523,3.88e-14,3;UBERON:0001915,3.88e-14,3;UBERON:0001982,3.88e-14,3;UBERON:0004535,8.72e-13,109;UBERON:0001009,2.18e-12,112;UBERON:0003915,3.69e-10,9;UBERON:0004700,3.69e-10,9;UBERON:0001917,3.69e-10,9;UBERON:0001638,4.89e-10,9;UBERON:0010260,4.89e-10,9;UBERON:0003920,4.89e-10,9;UBERON:0004582,4.89e-10,9;UBERON:0007500,2.02e-09,59;UBERON:0001981,2.02e-09,59;UBERON:0004537,2.02e-09,59;UBERON:0006965,2.02e-09,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0.0787107813136792,0,0,0.154816123316076,0,0,0,0.46480320348181,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,1.72425731986345,0.661044872784862,0,1.1384259382189,1.17447437874188,0,0,0.560508562981536,0.790152254325231,0,0,0.822405995998037,0,0.977766799900771,0,0,0,0.589211814949674,0.443067789167242,0,0,0,0,0,0,0,0,0,0,1.14966148080576,0,0.506039384039006,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0.571994910780128,1.85728750664782,1.39133685156694,0.860234595106124,2.08284300964557,0,0,0.275118041940067,0.626984899610432,1.03366703667732,0,1.67360306382335,2.41697590265488,0.760272105718513,7.07779966889692,1.47065232138347,0.81014194788176,2.67899184852239,1.34717623575702,1.0135033243499,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03169540298255,2.77791307545966,1.90254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0.743212700502875,0,0,0,0.199579371432817,0.5745161103971,0.211673582723883,0,0,0,0,0,0.677167111206413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0.276283915531148,0,0,1.23084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.247127877893006,0,0,0,0,1.45963831372533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33971858218986,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0.322231671127465,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0.219284049578707,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0.177404740325278,0.230467975111559,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687051635306701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0.0636471582781649,0,0,0,0.404112318087525,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0.0787107813136792,0,0,0.154816123316076,0,0,0,0.46480320348181,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,1.72425731986345,0.661044872784862,0,1.1384259382189,1.17447437874188,0,0,0.560508562981536,0.790152254325231,0,0,0.822405995998037,0,0.977766799900771,0,0,0,0.589211814949674,0.443067789167242,0,0,0,0,0,0,0,0,0,0,1.14966148080576,0,0.506039384039006,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0.571994910780128,1.85728750664782,1.39133685156694,0.860234595106124,2.08284300964557,0,0,0.275118041940067,0.626984899610432,1.03366703667732,0,1.67360306382335,2.41697590265488,0.760272105718513,7.07779966889692,1.47065232138347,0.81014194788176,2.67899184852239,1.34717623575702,1.0135033243499,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03169540298255,2.77791307545966,1.90254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0.743212700502875,0,0,0,0.199579371432817,0.5745161103971,0.211673582723883,0,0,0,0,0,0.677167111206413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0.276283915531148,0,0,1.23084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.247127877893006,0,0,0,0,1.45963831372533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33971858218986,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0.322231671127465,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0.219284049578707,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0.177404740325278,0.230467975111559,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687051635306701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0.299823467774787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0.0636471582781649,0,0,0,0.404112318087525,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p2@ENST00000426468 | |short_description=p2@ENST00000426468 | ||
}} | }} |
Latest revision as of 19:41, 29 July 2015
Short description: | p2@ENST00000426468 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000426468_5end |
Coexpression cluster: | C357_Endothelial_Lymphatic_Renal_Hepatic_seminal_breast_heart |
Association with transcript: | 5bp_to_ENST00000426468_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 5.04e-33 | 18 |
endothelium | 5.04e-33 | 18 |
cardiovascular system endothelium | 5.04e-33 | 18 |
lymphatic vessel | 5.91e-30 | 8 |
lymph vasculature | 5.91e-30 | 8 |
lymphatic part of lymphoid system | 5.91e-30 | 8 |
simple squamous epithelium | 7.29e-27 | 22 |
lymphoid system | 5.75e-24 | 10 |
squamous epithelium | 1.56e-23 | 25 |
vessel | 9.66e-22 | 68 |
vasculature | 1.08e-18 | 78 |
vascular system | 1.08e-18 | 78 |
umbilical vein | 1.32e-17 | 5 |
microcirculatory vessel | 3.88e-14 | 3 |
endothelium of capillary | 3.88e-14 | 3 |
capillary | 3.88e-14 | 3 |
cardiovascular system | 8.72e-13 | 109 |
circulatory system | 2.18e-12 | 112 |
endothelial tube | 3.69e-10 | 9 |
arterial system endothelium | 3.69e-10 | 9 |
endothelium of artery | 3.69e-10 | 9 |
vein | 4.89e-10 | 9 |
umbilical blood vessel | 4.89e-10 | 9 |
venous blood vessel | 4.89e-10 | 9 |
venous system | 4.89e-10 | 9 |
epithelial tube open at both ends | 2.02e-09 | 59 |
blood vessel | 2.02e-09 | 59 |
blood vasculature | 2.02e-09 | 59 |
vascular cord | 2.02e-09 | 59 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 7.46e-11 | 1 |
lymphosarcoma | 7.46e-11 | 1 |