FFCP PHASE1:Hg19::chr3:193561605..193561612,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=185bp_to_ENST00000439074_5end | |association_with_transcript=185bp_to_ENST00000439074_5end | ||
|cluster_id=chr3:193561605..193561612,- | |||
|coexpression_cluster_id=C346 | |||
|description=CAGE_peak_3_at_ENST00000439074_5end | |description=CAGE_peak_3_at_ENST00000439074_5end | ||
|id=chr3:193561605..193561612,- | |id=chr3:193561605..193561612,- | ||
|ontology_enrichment_celltype=CL:0002563!5.08e-13!4;CL:0000313!5.38e-13!1;CL:0002253!2.58e-07!2;CL:0000159!3.93e-07!2 | |ontology_enrichment_celltype=CL:0002563!5.08e-13!4;CL:0000313!5.38e-13!1;CL:0002253!2.58e-07!2;CL:0000159!3.93e-07!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;5.42e-195;1!UBERON:0004161;2.25e-19;11!UBERON:0009497;1.21e-16;13!UBERON:0003104;2.32e-07;31 | |||
|ontology_enrichment_disease=DOID:2152!5.38e-13!1;DOID:299!9.17e-08!25;DOID:3493!4.17e-07!2;DOID:1036!9.38e-07!8 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000989!2.95e-13!1;UBERON:0008811!2.95e-13!1;UBERON:0006258!2.95e-13!1;UBERON:0005876!2.95e-13!1;UBERON:0004874!2.95e-13!1;UBERON:0001242!5.08e-13!4;UBERON:0001262!5.08e-13!4;UBERON:0004786!5.08e-13!4;UBERON:0004808!5.08e-13!4;UBERON:0001277!5.08e-13!4;UBERON:0004911!5.38e-13!1;UBERON:0003350!1.33e-10!5;UBERON:0004909!3.93e-07!2 | |ontology_enrichment_uberon=UBERON:0000989!2.95e-13!1;UBERON:0008811!2.95e-13!1;UBERON:0006258!2.95e-13!1;UBERON:0005876!2.95e-13!1;UBERON:0004874!2.95e-13!1;UBERON:0001242!5.08e-13!4;UBERON:0001262!5.08e-13!4;UBERON:0004786!5.08e-13!4;UBERON:0004808!5.08e-13!4;UBERON:0001277!5.08e-13!4;UBERON:0004911!5.38e-13!1;UBERON:0003350!1.33e-10!5;UBERON:0004909!3.93e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002110;2.39e-66;3!UBERON:0002294;1.78e-29;7!UBERON:0001173;1.78e-29;7!UBERON:0002075;1.85e-12;18!UBERON:0002423;2.15e-09;25!UBERON:0004458;2.32e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,2.39e-66,3;UBERON:0006242,2.39e-66,3;UBERON:0002294,2.62e-23,9;UBERON:0001173,2.62e-23,9;UBERON:0004912,2.62e-23,9;UBERON:0002075,1.85e-12,18;UBERON:0009497,2.15e-09,25;UBERON:0000015,2.15e-09,25;UBERON:0002423,2.15e-09,25;UBERON:0006235,2.15e-09,25;UBERON:0004161,2.15e-09,25 | |||
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|short_description=p3@ENST00000439074 | |short_description=p3@ENST00000439074 | ||
}} | }} |
Latest revision as of 19:35, 29 July 2015
Short description: | p3@ENST00000439074 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000439074_5end |
Coexpression cluster: | C346_gall_ductus_seminal_temporal_duodenum_Hepatocyte_liver |
Association with transcript: | 185bp_to_ENST00000439074_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gallbladder | 2.39e-66 | 3 |
gall bladder primordium | 2.39e-66 | 3 |
biliary system | 2.62e-23 | 9 |
biliary tree | 2.62e-23 | 9 |
biliary bud | 2.62e-23 | 9 |
viscus | 1.85e-12 | 18 |
epithelium of foregut-midgut junction | 2.15e-09 | 25 |
anatomical boundary | 2.15e-09 | 25 |
hepatobiliary system | 2.15e-09 | 25 |
foregut-midgut junction | 2.15e-09 | 25 |
septum transversum | 2.15e-09 | 25 |