FFCP PHASE1:Hg19::chr3:115824309..115824311,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:115824309..115824311,- | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr3:115824309..115824311,- | |||
|id=chr3:115824309..115824311,- | |||
|ontology_enrichment_celltype=CL:0000066!3.01e-21!254;CL:0000039!2.02e-17!7;CL:0000586!2.02e-17!7;CL:0002150!1.81e-07!3;CL:0000861!1.81e-07!3;CL:0000076!2.59e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.21e-27;7!CL:0000586;3.21e-27;7!CL:0000540;1.11e-18;6!CL:0000404;1.11e-18;6!CL:0002149;1.22e-08;6!CL:0002255;1.22e-08;6!CL:0002535;4.42e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.35e-27,7;CL:0000586,4.35e-27,7;CL:0000540,1.08e-18,6;CL:0000031,1.08e-18,6;CL:0000404,1.08e-18,6;CL:0000047,3.55e-14,8;CL:0002149,9.27e-09,6;CL:0002255,9.27e-09,6;CL:0002535,3.93e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.65e-19;10!UBERON:0005564;3.65e-19;10!CL:0000031;1.11e-18;6 | |||
|ontology_enrichment_disease=DOID:305!3.63e-38!106;DOID:0050687!1.88e-35!143;DOID:162!4.37e-24!235;DOID:14566!2.90e-23!239;DOID:1749!2.18e-10!14;DOID:3095!1.05e-09!22;DOID:2994!1.05e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.12e-13;22!DOID:2994;2.12e-13;22!DOID:6193;6.82e-13;1!DOID:3001;1.22e-08;6!DOID:3350;4.42e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.23e-13,22;DOID:2994,2.23e-13,22;DOID:6193,6.06e-13,1;DOID:305,9.07e-10,106;DOID:3001,9.27e-09,6;DOID:0050687,1.96e-08,143;DOID:3350,4.17e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.51e-16!9;UBERON:0001557!7.17e-09!19;UBERON:0008947!3.49e-08!38;UBERON:0003258!3.49e-08!38;UBERON:0000072!2.46e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.25e-24;8!UBERON:0003135;1.89e-17;11!UBERON:0000991;2.93e-09;21!UBERON:0003133;3.39e-09;44!UBERON:0003101;7.57e-09;22!UBERON:0000079;7.57e-09;22!UBERON:0006955;4.42e-07;2!UBERON:0004801;4.42e-07;2!UBERON:0005156;9.48e-07;59!UBERON:0000990;9.48e-07;59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.45e-24,8;UBERON:0003135,2.28e-17,11;UBERON:0003133,2.31e-11,48;UBERON:0000991,3.23e-09,21;UBERON:0009196,3.23e-09,21;UBERON:0009117,3.23e-09,21;UBERON:0005564,3.23e-09,21;UBERON:0005156,3.97e-09,59;UBERON:0000990,3.97e-09,59;UBERON:0004176,8.31e-09,22;UBERON:0003101,8.31e-09,22;UBERON:0000079,8.31e-09,22;UBERON:0006955,3.93e-07,2;UBERON:0004801,3.93e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0,0,3.28017106138317,1.09493207722749,0,0,0,0,0,0.236613600079688,0.337169380156203,0.964044119533928,0.330881918197182,0.217879444092406,0,0.269662616320329,0.588664395376038,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0.109750285408626,1.1240175325762,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0.962479855263359,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0.485442086998054,0,0,0.47748896947538,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0.449341755736634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0.23056390438806,0.269272933229316,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489961987071888,1.48000651186684,0,1.37588825977293,0.774050650312681,0.0730893170861856,0.0821154570532092,0.193978032976839,0,0,0,0,0,0,0.240476460754601,0,0,0,0.114536596165916,0,0.288109595976299,0,0,0.271808412147228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.66184130548556,3.43848591493084,4.56984371832104,0,0,0,0,0,0,0.739202355635845,0,0.767660789277781,0,0,0.5085370753095,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0,0,0,0.308801447160972,0,0,1.3503982678964,0.168942440653073,0,0.690860683462397,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707818340086442,0,0.231051332300676,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0.667388411352415,0,0,0.560544326627578,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,1.86123831398592,1.91107787795487,0,0.883352102537187,0.609589624911347,0,0,0,0,0,0,0,1.35535298446752,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,3.93356059069304,0.633492505057185,3.56960904096936,3.20660886318673,1.28652859348783,3.25919801080088,0,0,0,0,0,0,0,0,0.897054900644907,0,0,0,0,0,0,0,0.325613074443898,0.106727345877715,0,0.628776414746108,0,0,0,0,0,0 | |||
|short_description=p@chr3:115824309..115824311,- | |||
}} |
Latest revision as of 14:37, 29 July 2015
Short description: | p@chr3:115824309..115824311, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:115824309..115824311, - |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.35e-27 | 7 |
germ cell | 4.35e-27 | 7 |
neuron | 1.08e-18 | 6 |
neuroblast | 1.08e-18 | 6 |
electrically signaling cell | 1.08e-18 | 6 |
neuronal stem cell | 3.55e-14 | 8 |
epithelial cell of uterus | 9.27e-09 | 6 |
stromal cell of endometrium | 9.27e-09 | 6 |
epithelial cell of cervix | 3.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 9.45e-24 | 8 |
male reproductive organ | 2.28e-17 | 11 |
reproductive organ | 2.31e-11 | 48 |
gonad | 3.23e-09 | 21 |
indifferent external genitalia | 3.23e-09 | 21 |
indifferent gonad | 3.23e-09 | 21 |
gonad primordium | 3.23e-09 | 21 |
reproductive structure | 3.97e-09 | 59 |
reproductive system | 3.97e-09 | 59 |
external genitalia | 8.31e-09 | 22 |
male organism | 8.31e-09 | 22 |
male reproductive system | 8.31e-09 | 22 |
uterine epithelium | 3.93e-07 | 2 |
cervix epithelium | 3.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.23e-13 | 22 |
germ cell cancer | 2.23e-13 | 22 |
epithelioid sarcoma | 6.06e-13 | 1 |
carcinoma | 9.07e-10 | 106 |
female reproductive endometrioid cancer | 9.27e-09 | 6 |
cell type cancer | 1.96e-08 | 143 |
mesenchymal cell neoplasm | 4.17e-07 | 2 |