FFCP PHASE1:Hg19::chr3:112317985..112318004,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:112317985..112318004,- | |||
|coexpression_cluster_id=C333 | |||
|description=CAGE_peak_at_chr3:112317985..112318004,- | |||
|id=chr3:112317985..112318004,- | |||
|ontology_enrichment_celltype=CL:0000055!7.29e-13!180;CL:0000057!1.35e-12!75;CL:0002334!9.51e-08!12;CL:0000136!1.17e-07!15;CL:1000306!3.74e-07!4;CL:0002547!3.74e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:1000306;4.90e-16;4!CL:0002547;4.90e-16;4!CL:0002617;3.23e-15;2!CL:0000136;2.21e-13;13!CL:0000153;2.06e-12;9!CL:0000447;2.06e-12;9!CL:0002579;9.36e-11;3!CL:0002615;2.24e-10;3!CL:0000214;4.10e-10;3!CL:0002334;1.19e-09;12!CL:0002616;3.32e-08;1!CL:0000327;1.68e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,2.93e-16,4;CL:0002547,2.93e-16,4;CL:0002617,4.47e-15,2;CL:0000153,2.01e-12,9;CL:0000447,2.01e-12,9;CL:0000136,1.62e-11,15;CL:0002579,9.18e-11,3;CL:0000214,2.25e-10,3;CL:0002615,3.93e-10,3;CL:0002334,1.29e-09,12;CL:0000057,4.01e-09,76;CL:0002616,1.52e-08,1;CL:0000327,1.66e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;1.31e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,1.22e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!7.92e-08!6;UBERON:0002358!7.92e-08!6;UBERON:0003684!7.92e-08!6;UBERON:0001178!7.92e-08!6;UBERON:0000415!3.74e-07!4;UBERON:0007240!3.74e-07!4;UBERON:0005742!3.74e-07!4;UBERON:0005734!3.74e-07!4;UBERON:0004664!3.74e-07!4;UBERON:0004663!3.74e-07!4;UBERON:0004457!9.31e-07!12;UBERON:0000042!9.31e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;8.41e-28;9!UBERON:0000042;8.41e-28;9!UBERON:0003688;2.08e-19;6!UBERON:0002358;2.08e-19;6!UBERON:0003684;2.08e-19;6!UBERON:0001178;2.08e-19;6!UBERON:0004797;4.90e-16;4!UBERON:0000415;4.90e-16;4!UBERON:0007240;4.90e-16;4!UBERON:0005742;4.90e-16;4!UBERON:0005734;4.90e-16;4!UBERON:0004664;4.90e-16;4!UBERON:0004663;4.90e-16;4!UBERON:0001443;2.33e-10;11!UBERON:0006915;4.10e-10;3!UBERON:0007616;4.10e-10;3!UBERON:0002217;4.10e-10;3!UBERON:0002018;4.10e-10;3!UBERON:0007029;3.32e-08;1!UBERON:0002426;3.32e-08;1!UBERON:0003831;3.32e-08;1!UBERON:0003898;3.32e-08;1!UBERON:0004830;3.32e-08;1!UBERON:0003830;3.32e-08;1!UBERON:0005175;3.32e-08;1!UBERON:0001774;3.32e-08;1!UBERON:0001103;3.32e-08;1!UBERON:0000310;7.48e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004457,9.26e-21,12;UBERON:0000042,9.26e-21,12;UBERON:0003688,3.59e-19,6;UBERON:0002358,3.59e-19,6;UBERON:0003684,3.59e-19,6;UBERON:0001178,3.59e-19,6;UBERON:0000415,2.93e-16,4;UBERON:0007240,2.93e-16,4;UBERON:0005742,2.93e-16,4;UBERON:0005734,2.93e-16,4;UBERON:0004664,2.93e-16,4;UBERON:0004663,2.93e-16,4;UBERON:0001443,2.10e-10,11;UBERON:0006915,2.25e-10,3;UBERON:0007616,2.25e-10,3;UBERON:0002217,2.25e-10,3;UBERON:0002018,2.25e-10,3;UBERON:0004797,1.62e-09,7;UBERON:0002426,2.02e-08,1;UBERON:0003831,2.02e-08,1;UBERON:0003898,2.02e-08,1;UBERON:0004830,2.02e-08,1;UBERON:0003830,2.02e-08,1;UBERON:0005175,2.02e-08,1;UBERON:0001774,2.02e-08,1;UBERON:0001103,2.02e-08,1;UBERON:0010084,2.02e-08,1;UBERON:0007029,2.50e-08,1;UBERON:0004923,3.29e-07,66;UBERON:0000310,7.88e-07,10 | |||
|phase1_expression=1.09007027562334,5.1384125733836,2.53717927372748,1.0007329835313,0.893922188854576,1.74467704820074,0,0,0.261185628199839,0,0,0.436882744260345,0,0.123766352960047,0.331397375727916,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,1.00267582127178,1.15877215168659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,1.13967460498122,0.132409180813219,1.72101972449288,1.41867352879343,1.68203280042692,0,0.24666754841716,0.622422070799533,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,1.49490172172997,0.847727604638247,0,0.721367704669072,0,0.37223371266318,0.168776332241266,0,0.757301322732344,0.552299391853796,0.323292113637624,1.06502877754984,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,1.01346914667305,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0.468565659970853,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0.992431231275107,0.306923946576125,1.40330047216537,3.45975702990393,0,5.14732547659544,0,0,1.06537035187876,0.246381468041427,0,0.232420756919918,0,0,0,0.229628896329213,0.182091168006717,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0.290033387828457,0.0852266274161009,0.178064071293475,0,0,0,0,0.464845549297286,2.83331112147576,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0.38126038784765,0,0.855877976067841,0,0,0.359744915166629,0.54907405947211,0,0,0,0,0.48763373908959,0,0,0.136499911407986,0.424216295861138,0,0,0,0.438450885253763,0,0,0,0,0.281695602532241,0,0.392996164052485,0,0,1.47775344708365,1.64647446479951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,1.60515529459758,0,0,0,0,0.394584402849391,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.687481272035051,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,1.08599920350743,0,0.326587360109409,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40227985908335,0.554805861502613,0,1.0062716070103,0,0.686520205190771,1.20984739010591,0,0,0,0,0,0,0.265841714557995,0,0.300515217994437,0.761610424337591,0,0.181848659202559,0,0,0.796191777397232,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0.179088841081487,0,0.657852148736121,0.176689145945881,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0.150420656698515,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45713297917742,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,1.38652688589425,0.865253124247578,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0.0636471582781649,0,0.217716747896961,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0.122241444182866,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p@chr3:112317985..112318004,- | |||
}} |
Latest revision as of 14:17, 29 July 2015
Short description: | p@chr3:112317985..112318004, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:112317985..112318004, - |
Coexpression cluster: | C333_Fibroblast_Smooth_Preadipocyte_Adipocyte_Ewing_Placental_sacrococcigeal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 2.93e-16 | 4 |
fibroblast of the aortic adventitia | 2.93e-16 | 4 |
adipocyte of breast | 4.47e-15 | 2 |
GAG secreting cell | 2.01e-12 | 9 |
carbohydrate secreting cell | 2.01e-12 | 9 |
fat cell | 1.62e-11 | 15 |
omentum preadipocyte | 9.18e-11 | 3 |
synovial cell | 2.25e-10 | 3 |
adipocyte of omentum tissue | 3.93e-10 | 3 |
preadipocyte | 1.29e-09 | 12 |
fibroblast | 4.01e-09 | 76 |
perirenal adipocyte cell | 1.52e-08 | 1 |
extracellular matrix secreting cell | 1.66e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cavity lining | 9.26e-21 | 12 |
serous membrane | 9.26e-21 | 12 |
omentum | 3.59e-19 | 6 |
peritoneum | 3.59e-19 | 6 |
abdominal cavity | 3.59e-19 | 6 |
visceral peritoneum | 3.59e-19 | 6 |
artery wall | 2.93e-16 | 4 |
tunica adventitia of artery | 2.93e-16 | 4 |
adventitia | 2.93e-16 | 4 |
tunica adventitia of blood vessel | 2.93e-16 | 4 |
aorta tunica adventitia | 2.93e-16 | 4 |
aorta wall | 2.93e-16 | 4 |
chest | 2.10e-10 | 11 |
stratified squamous epithelium | 2.25e-10 | 3 |
layer of synovial tissue | 2.25e-10 | 3 |
synovial joint | 2.25e-10 | 3 |
synovial membrane of synovial joint | 2.25e-10 | 3 |
blood vessel layer | 1.62e-09 | 7 |
chest muscle | 2.02e-08 | 1 |
respiratory system muscle | 2.02e-08 | 1 |
skeletal muscle of trunk | 2.02e-08 | 1 |
respiratory system skeletal muscle | 2.02e-08 | 1 |
thoracic segment muscle | 2.02e-08 | 1 |
chest organ | 2.02e-08 | 1 |
muscle of trunk | 2.02e-08 | 1 |
diaphragm | 2.02e-08 | 1 |
future diaphragm | 2.02e-08 | 1 |
surface | 2.50e-08 | 1 |
organ component layer | 3.29e-07 | 66 |
breast | 7.88e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 1.22e-08 | 1 |