FFCP PHASE1:Hg19::chr2:87016482..87016502,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:87016482..87016502,-
|short_description=p@chr2:87016482..87016502,-
|description=CAGE_peak_at_chr2:87016482..87016502,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:87016482..87016502,- | |||
|coexpression_cluster_id=C1077 | |||
|description=CAGE_peak_at_chr2:87016482..87016502,- | |||
|id=chr2:87016482..87016502,- | |||
|ontology_enrichment_celltype=CL:0000625!1.30e-43!11;CL:0000791!2.58e-30!18;CL:0000789!2.58e-30!18;CL:0002420!2.58e-30!18;CL:0002419!2.58e-30!18;CL:0000790!2.58e-30!18;CL:0000084!8.73e-29!25;CL:0000827!8.73e-29!25;CL:0000738!3.15e-19!140;CL:0000838!2.22e-18!52;CL:0000542!5.94e-18!53;CL:0000051!5.94e-18!53;CL:0002087!9.71e-16!119;CL:0000037!2.77e-14!172;CL:0000566!2.77e-14!172;CL:0000988!4.24e-13!182;CL:0000623!1.28e-12!3;CL:0000825!1.28e-12!3;CL:0000842!3.92e-12!3;CL:0000767!5.75e-12!3;CL:0002032!1.00e-11!165;CL:0000837!1.00e-11!165;CL:0002031!4.77e-11!124;CL:0000224!3.28e-09!4;CL:0000094!6.35e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000625;8.09e-103;11!CL:0000791;2.75e-62;18!CL:0000789;2.75e-62;18!CL:0002419;2.75e-62;18!CL:0000084;8.51e-53;25!CL:0000542;2.06e-18;53!CL:0000623;2.65e-13;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,4.54e-103,11;CL:0000791,1.93e-62,18;CL:0000789,1.93e-62,18;CL:0002420,1.93e-62,18;CL:0002419,1.93e-62,18;CL:0000790,1.93e-62,18;CL:0000084,7.42e-53,25;CL:0000827,7.42e-53,25;CL:0000838,1.74e-33,52;CL:0000542,8.19e-33,53;CL:0000051,8.19e-33,53;CL:0000738,2.33e-17,136;CL:0002087,5.22e-16,115;CL:0000037,1.45e-13,168;CL:0000623,2.49e-13,3;CL:0000825,2.49e-13,3;CL:0002031,3.91e-13,120;CL:0000988,9.61e-13,177;CL:0002032,1.88e-12,161;CL:0000837,1.88e-12,161 | |||
|ontology_enrichment_development_v019=CL:0000790;2.75e-62;18!CL:0000051;2.06e-18;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!5.39e-14!7;UBERON:0000178!1.23e-11!15;UBERON:0000179!1.23e-11!15;UBERON:0000463!1.23e-11!15;UBERON:0002370!1.00e-09!4;UBERON:0005058!1.00e-09!4;UBERON:0009113!1.00e-09!4;UBERON:0003295!1.00e-09!4;UBERON:0005562!1.00e-09!4;UBERON:0002390!9.70e-08!102;UBERON:0003061!9.70e-08!102;UBERON:0002193!1.12e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.03e-20;2!UBERON:0005058;1.03e-20;2!UBERON:0009113;1.03e-20;2!UBERON:0004177;7.72e-09;5!UBERON:0005057;7.72e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.47e-11,4;UBERON:0005058,7.47e-11,4;UBERON:0009113,7.47e-11,4;UBERON:0003295,7.47e-11,4;UBERON:0005562,7.47e-11,4;UBERON:0003351,1.62e-07,6 | |||
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| ||
|short_description=p@chr2:87016482..87016502,- | |||
}} | }} |
Latest revision as of 12:54, 29 July 2015
Short description: | p@chr2:87016482..87016502, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:87016482..87016502, - |
Coexpression cluster: | C1077_thymus_CD8_Natural_blood_NK_Peripheral_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 4.54e-103 | 11 |
mature alpha-beta T cell | 1.93e-62 | 18 |
alpha-beta T cell | 1.93e-62 | 18 |
immature T cell | 1.93e-62 | 18 |
mature T cell | 1.93e-62 | 18 |
immature alpha-beta T cell | 1.93e-62 | 18 |
T cell | 7.42e-53 | 25 |
pro-T cell | 7.42e-53 | 25 |
lymphoid lineage restricted progenitor cell | 1.74e-33 | 52 |
lymphocyte | 8.19e-33 | 53 |
common lymphoid progenitor | 8.19e-33 | 53 |
leukocyte | 2.33e-17 | 136 |
nongranular leukocyte | 5.22e-16 | 115 |
hematopoietic stem cell | 1.45e-13 | 168 |
natural killer cell | 2.49e-13 | 3 |
pro-NK cell | 2.49e-13 | 3 |
hematopoietic lineage restricted progenitor cell | 3.91e-13 | 120 |
hematopoietic cell | 9.61e-13 | 177 |
hematopoietic oligopotent progenitor cell | 1.88e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.88e-12 | 161 |
Ontology term | p-value | n |
---|---|---|
thymus | 7.47e-11 | 4 |
hemolymphoid system gland | 7.47e-11 | 4 |
thymic region | 7.47e-11 | 4 |
pharyngeal gland | 7.47e-11 | 4 |
thymus primordium | 7.47e-11 | 4 |
pharyngeal epithelium | 1.62e-07 | 6 |