FFCP PHASE1:Hg19::chr2:62523413..62523427,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:62523413..62523427,+ | |||
|coexpression_cluster_id=C2703 | |||
|description=CAGE_peak_at_chr2:62523413..62523427,+ | |description=CAGE_peak_at_chr2:62523413..62523427,+ | ||
|id=chr2:62523413..62523427,+ | |id=chr2:62523413..62523427,+ | ||
|ontology_enrichment_celltype=CL:0000764!8.15e-13!2;CL:0000765!8.15e-13!2;CL:0000050!8.15e-13!2;CL:0000038!8.15e-13!2;CL:0000558!8.15e-13!2;CL:0000547!8.15e-13!2;CL:0000549!8.15e-13!2;CL:0000550!8.15e-13!2;CL:0000552!8.15e-13!2 | |ontology_enrichment_celltype=CL:0000764!8.15e-13!2;CL:0000765!8.15e-13!2;CL:0000050!8.15e-13!2;CL:0000038!8.15e-13!2;CL:0000558!8.15e-13!2;CL:0000547!8.15e-13!2;CL:0000549!8.15e-13!2;CL:0000550!8.15e-13!2;CL:0000552!8.15e-13!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;5.34e-20;2!CL:0000558;5.34e-20;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,5.34e-20,2;CL:0000765,5.34e-20,2;CL:0000050,5.34e-20,2;CL:0000038,5.34e-20,2;CL:0000558,5.34e-20,2;CL:0000547,5.34e-20,2;CL:0000549,5.34e-20,2;CL:0000550,5.34e-20,2;CL:0000552,5.34e-20,2;CL:0000763,1.87e-08,108;CL:0000049,1.87e-08,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!3.53e-17!8;DOID:8692!2.55e-16!31;DOID:1240!1.37e-12!39;DOID:2531!3.39e-09!51;DOID:0060083!3.39e-09!51;DOID:8552!6.99e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.45e-22;31!DOID:1036;2.94e-18;8!DOID:1240;1.34e-14;39!DOID:2531;2.04e-10;51!DOID:0060083;2.04e-10;51!DOID:8552;3.45e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.46e-22,31;DOID:1036,3.01e-18,8;DOID:1240,1.10e-17,39;DOID:2531,3.11e-13,51;DOID:0060083,3.11e-13,51;DOID:8552,2.74e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!6.95e-35!15;UBERON:0000179!6.95e-35!15;UBERON:0000463!6.95e-35!15;UBERON:0002390!1.23e-08!102;UBERON:0003061!1.23e-08!102;UBERON:0002106!5.44e-08!3;UBERON:0004854!5.44e-08!3;UBERON:0009034!5.44e-08!3;UBERON:0002095!5.44e-08!3;UBERON:0004782!5.44e-08!3;UBERON:0003281!5.44e-08!3;UBERON:0009664!5.44e-08!3;UBERON:0002296!5.44e-08!3;UBERON:0005602!5.44e-08!3;UBERON:0001179!5.44e-08!3;UBERON:0006293!5.44e-08!3;UBERON:0002193!1.31e-07!112;UBERON:0004177!2.76e-07!7 | |ontology_enrichment_uberon=UBERON:0000178!6.95e-35!15;UBERON:0000179!6.95e-35!15;UBERON:0000463!6.95e-35!15;UBERON:0002390!1.23e-08!102;UBERON:0003061!1.23e-08!102;UBERON:0002106!5.44e-08!3;UBERON:0004854!5.44e-08!3;UBERON:0009034!5.44e-08!3;UBERON:0002095!5.44e-08!3;UBERON:0004782!5.44e-08!3;UBERON:0003281!5.44e-08!3;UBERON:0009664!5.44e-08!3;UBERON:0002296!5.44e-08!3;UBERON:0005602!5.44e-08!3;UBERON:0001179!5.44e-08!3;UBERON:0006293!5.44e-08!3;UBERON:0002193!1.31e-07!112;UBERON:0004177!2.76e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.63e-29;15!UBERON:0000179;5.63e-29;15!UBERON:0000463;5.63e-29;15!UBERON:0002390;1.23e-16;32!UBERON:0002193;1.86e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.26e-29,15;UBERON:0000179,6.26e-29,15;UBERON:0000463,6.26e-29,15 | |||
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|short_description=p@chr2:62523413..62523427,+ | |short_description=p@chr2:62523413..62523427,+ | ||
}} | }} |
Latest revision as of 11:17, 29 July 2015
Short description: | p@chr2:62523413..62523427, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:62523413..62523427, + |
Coexpression cluster: | C2703_Reticulocytes_acute_chronic_Whole_blood_liver_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 5.34e-20 | 2 |
erythroblast | 5.34e-20 | 2 |
megakaryocyte-erythroid progenitor cell | 5.34e-20 | 2 |
erythroid progenitor cell | 5.34e-20 | 2 |
reticulocyte | 5.34e-20 | 2 |
proerythroblast | 5.34e-20 | 2 |
basophilic erythroblast | 5.34e-20 | 2 |
polychromatophilic erythroblast | 5.34e-20 | 2 |
orthochromatic erythroblast | 5.34e-20 | 2 |
myeloid cell | 1.87e-08 | 108 |
common myeloid progenitor | 1.87e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
blood | 6.26e-29 | 15 |
haemolymphatic fluid | 6.26e-29 | 15 |
organism substance | 6.26e-29 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.46e-22 | 31 |
chronic leukemia | 3.01e-18 | 8 |
leukemia | 1.10e-17 | 39 |
hematologic cancer | 3.11e-13 | 51 |
immune system cancer | 3.11e-13 | 51 |
chronic myeloid leukemia | 2.74e-10 | 1 |