FFCP PHASE1:Hg19::chr2:46611800..46611855,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:46611800..46611855,+
|short_description=p@chr2:46611800..46611855,+
|description=CAGE_peak_at_chr2:46611800..46611855,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:46611800..46611855,+ | |||
|coexpression_cluster_id=C1907 | |||
|description=CAGE_peak_at_chr2:46611800..46611855,+ | |||
|id=chr2:46611800..46611855,+ | |||
|ontology_enrichment_celltype=CL:0000222!2.41e-10!119;CL:0000213!5.23e-09!57;CL:0000215!5.23e-09!57;CL:0000115!2.22e-08!35;CL:0002078!1.38e-07!44;CL:0000220!2.00e-07!246;CL:0002139!2.90e-07!24;CL:0002321!4.92e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.06e-07;36!CL:0002138;1.77e-07;6!CL:0002078;1.93e-07;45!CL:0002139;2.99e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,7.40e-09,58;CL:0000215,7.40e-09,58;CL:0002078,8.16e-09,45;CL:0000115,1.55e-08,36;CL:0005020,2.08e-07,6;CL:0002138,2.08e-07,6;CL:0005022,2.08e-07,6;CL:0002139,5.31e-07,24;CL:0000222,8.69e-07,121 | |||
|ontology_enrichment_development_v019=CL:0005022;1.77e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!3.82e-12!659;UBERON:0000483!2.12e-11!309;UBERON:0000477!2.16e-11!286;UBERON:0003914!7.04e-11!118;UBERON:0000119!7.44e-11!312;UBERON:0004111!1.02e-10!241;UBERON:0000467!1.09e-10!625;UBERON:0000480!1.75e-10!626;UBERON:0002049!5.54e-10!79;UBERON:0007798!5.54e-10!79;UBERON:0002100!7.92e-10!216;UBERON:0004872!3.66e-09!84;UBERON:0001009!9.36e-09!113;UBERON:0000055!1.31e-08!69;UBERON:0000490!1.43e-08!138;UBERON:0005256!2.68e-08!143;UBERON:0000475!3.79e-08!365;UBERON:0000481!3.81e-08!347;UBERON:0004535!5.88e-08!110;UBERON:0001981!5.61e-07!60;UBERON:0007500!5.61e-07!60;UBERON:0004537!5.61e-07!60;UBERON:0006965!5.61e-07!60;UBERON:0004923!7.03e-07!57;UBERON:0009569!9.66e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.57e-07;9!UBERON:0000042;2.57e-07;9!UBERON:0007100;7.81e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004923,7.13e-08,66;UBERON:0003914,1.75e-07,117;UBERON:0005631,4.67e-07,14;UBERON:0000158,4.67e-07,14;UBERON:0001009,9.51e-07,112 | |||
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|phase1_expression=1.63510541343501,4.06790995392868,1.26858963686374,4.00293193412522,5.36353313312745,6.10636966870258,0,0.631719873426831,0.522371256399677,0.737201809504527,0,2.83973783769224,1.84636884759917,0.37129905888014,0.994192127183747,1.34465029290355,1.20538905604795,2.19093027116212,0.975865597581014,0,0.204000691244253,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0.447830948479849,0.32389366601898,0.257575567634187,0,0.377875943688809,0,0,0,0,0,0,0,0,0,1.35426486594342,0.188242339542605,0.272906150057846,0.224723484445085,0,0.320929027076094,0.639337125799041,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,12.1903433156981,0.670700859703636,1.02290049474824,3.97583067623023,5.51471701699479,5.35932120155048,0,2.43317435151318,0.378139268656271,1.33037638477538,0.87834785693126,1.11332214173056,1.82147644146271,0,0.324547393654683,0.174129737299267,0.531831842075461,0,0,0,0.596287222100115,0.860234595106124,1.04142150482278,1.69592382577203,2.09749718104953,3.57653454522088,0.626984899610432,2.84258435086262,4.26919515224052,3.01248551488203,2.01414658554573,1.52054421143703,5.6134273236079,0.735326160691737,2.43042584364528,1.07159673940896,0.673588117878509,0.450445921933289,0,0,0.916008719652036,1.31780417436063,0,1.3082821564276,1.98788780678127,0.379891534993739,0.264818361626438,1.14734648299525,0.354668382198357,0,3.20246987189115,1.2333377420858,0.311211035399766,1.88594940897563,1.63461903113459,1.36221684880438,0.576175924479999,0.468642863667593,1.5608003841516,0.570471821544449,0.747243402759005,0,0,0,0,0.368502951935304,0.309977343527296,3.56400857184616,8.65434252474949,0,0.718618141816238,0,0.125118519871964,0,0.438977620880838,1.22595118319608,4.05642759047811,0.567160915800105,0.358779271377724,2.34913127700424,2.33125091275518,0.600182192168805,0.824420233907511,0.257640540045629,2.04728541964749,0.168776332241266,0.68205903612839,0.504867548488229,0.460249493211497,0.484938170456436,0.710019185033229,0.302256294682921,0.339121184620975,1.15956511897978,0.818238361772504,0.860413786167011,0,0,0.116193942869518,0.207322110030741,0,0,0,1.92972281457866,1.38134921352481,0.928735856063958,2.16563844500876,0.236613600079688,0.168584690078102,0,0.661763836394364,0,0.474541238222193,0.134831308160164,0,0,4.42893272774789,1.40241773803446,2.057870056657,0,2.53510069643662,0.982827216677626,0.590789906681404,0,0.368965315629341,2.74508496477641,0.98775256867763,0,0.804231779293047,0.370353780634118,1.3032332212413,1.03993478527958,0,0.231860809950154,0.117408694235822,1.29929802984966,5.09284063834272,4.18559134916116,0,0,0.492434012174795,0.468008530278475,0.148631162288728,0,0.335964256397719,0.567100388969546,1.52249488594842,0.581267877027924,0.383382679165211,0,0.088048434013226,0.207328115540772,0,0.25248486685276,0.126995788584338,0,1.17217447210047,0,0.411309970813294,0.600686115687835,0.857479297891735,0.112131084345361,0,0,0.904902010304444,0,1.690605505112,1.86156681609409,2.08014873822732,0,0,0,1.57275793023962,1.62786481617433,0.823240336780769,0.325736184293735,2.84313558994037,0,2.41151501647669,0,0.699810938274399,2.43247561282381,2.51128545716063,4.21667878966063,1.91699884393266,0,0,0.434343920002738,0.821905290201534,0.358121926479791,0,0.197030760201927,0,0,0,0,0,0,0.637938751653163,0,0,0.414415513436035,0.49076596687656,1.00034104211935,0.271265023699736,4.99130067673937,3.21172179834891,3.15404830067869,1.52283839490527,0.902838299183157,0,2.0694614258501,0,0,2.69339204851057,0.587403472388222,0,0,0,0,0.606255142892519,0,2.11673205330776,1.48864684691266,0.153461973288062,1.12264037773229,2.30650468660262,1.53512174720011,2.57366273829772,1.48418066444991,0,0.532685175939381,0.164254312027618,0.519254429183621,0.464841513839837,0.120859449591622,1.40354529212299,2.5782676902051,1.37777337797528,1.0925470080403,7.73634048260602,0.451199612907412,0.0770153371044148,0,1.46139224653261,0,6.8240030442538,2.2112181685947,2.15915916102139,15.4227252690289,0,0,0.509752546090077,1.66215201785745,0,0,0,0,2.62411716559765,2.27764876265012,3.09123034943167,0,0.082509499920588,0,1.30012049207304,0,1.06337790121334,0.308097234229289,0,0.137836572484531,0.537101224341368,0.435050081742686,0.596586391912706,0.178064071293475,2.31398881505369,0.768760269460425,0.382838137483752,1.2138933702666,2.32422774648643,0.31481234683064,0,0.616067160352178,0,0.869932992075073,0.18532421910392,0,0,0.316379424718726,1.90630193923825,0.767693373934002,2.1396949401696,0,0.78494864019923,1.79872457583315,0.823611089208164,0.706874414074119,0.404364963146632,1.58510321173008,0,0.975267478179181,1.21856744815642,3.16950440270266,2.72999822815972,3.11091950298168,0,0,0.66343897524122,1.31535265576129,2.31510213706675,0.655894752046633,0.405820753925408,0.92947049429925,0.281695602532241,0.573645408816206,0.785992328104969,0.3566710514812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| ||
|short_description=p@chr2:46611800..46611855,+ | |||
}} | }} |
Latest revision as of 10:29, 29 July 2015
Short description: | p@chr2:46611800..46611855, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:46611800..46611855, + |
Coexpression cluster: | C1907_lung_Fibroblast_Renal_breast_Hepatic_Endothelial_heart |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 7.40e-09 | 58 |
barrier cell | 7.40e-09 | 58 |
meso-epithelial cell | 8.16e-09 | 45 |
endothelial cell | 1.55e-08 | 36 |
lymphangioblast | 2.08e-07 | 6 |
endothelial cell of lymphatic vessel | 2.08e-07 | 6 |
vascular lymphangioblast | 2.08e-07 | 6 |
endothelial cell of vascular tree | 5.31e-07 | 24 |
mesodermal cell | 8.69e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
organ component layer | 7.13e-08 | 66 |
epithelial tube | 1.75e-07 | 117 |
extraembryonic membrane | 4.67e-07 | 14 |
membranous layer | 4.67e-07 | 14 |
circulatory system | 9.51e-07 | 112 |